PDB Short entry for 1VQ3 HEADER LIGASE 15-DEC-04 1VQ3 TITLE CRYSTAL STRUCTURE OF PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE, PURS TITLE 2 SUBUNIT (EC 6.3.5.3) (TM1244) FROM THERMOTOGA MARITIMA AT 1.90 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE, PURS SUBUNIT; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 6.3.5.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 GENE: TM1244; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TM1244, PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE, PURS SUBUNIT (EC KEYWDS 2 6.3.5.3), STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 JCSG, PROTEIN STRUCTURE INITIATIVE, PSI, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 20-SEP-23 1VQ3 1 REMARK REVDAT 5 25-JAN-23 1VQ3 1 SEQADV REVDAT 4 13-JUL-11 1VQ3 1 VERSN REVDAT 3 24-FEB-09 1VQ3 1 VERSN REVDAT 2 04-NOV-08 1VQ3 1 JRNL REVDAT 1 28-DEC-04 1VQ3 0 JRNL AUTH I.I.MATHEWS,S.S.KRISHNA,R.SCHWARZENBACHER,D.MCMULLAN, JRNL AUTH 2 L.JAROSZEWSKI,M.D.MILLER,P.ABDUBEK,S.AGARWALLA,E.AMBING, JRNL AUTH 3 H.L.AXELROD,J.M.CANAVES,D.CARLTON,H.J.CHIU,T.CLAYTON, JRNL AUTH 4 M.DIDONATO,L.DUAN,M.A.ELSLIGER,S.K.GRZECHNIK,J.HALE, JRNL AUTH 5 E.HAMPTON,J.HAUGEN,K.K.JIN,H.E.KLOCK,E.KOESEMA,J.S.KOVARIK, JRNL AUTH 6 A.KREUSCH,P.KUHN,I.LEVIN,A.T.MORSE,E.NIGOGHOSSIAN,L.OKACH, JRNL AUTH 7 S.OOMMACHEN,J.PAULSEN,K.QUIJANO,R.REYES,C.L.RIFE,G.SPRAGGON, JRNL AUTH 8 R.C.STEVENS,H.VAN DEN BEDEM,A.WHITE,G.WOLF,Q.XU,K.O.HODGSON, JRNL AUTH 9 J.WOOLEY,A.M.DEACON,A.GODZIK,S.A.LESLEY,I.A.WILSON JRNL TITL CRYSTAL STRUCTURE OF PHOSPHORIBOSYLFORMYL-GLYCINAMIDINE JRNL TITL 2 SYNTHASE II, PURS SUBUNIT (TM1244) FROM THERMOTOGA MARITIMA JRNL TITL 3 AT 1.90 A RESOLUTION. JRNL REF PROTEINS V. 65 249 2006 JRNL REFN ISSN 0887-3585 JRNL PMID 16865708 JRNL DOI 10.1002/PROT.21024 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0001 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 28282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.300 REMARK 3 FREE R VALUE TEST SET COUNT : 957 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1406 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2789 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 301 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 33.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.87000 REMARK 3 B22 (A**2) : 1.70000 REMARK 3 B33 (A**2) : -0.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.155 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.272 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2837 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2696 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3822 ; 1.553 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6264 ; 0.796 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 337 ; 5.739 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;34.184 ;23.786 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 550 ;13.980 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;17.171 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 429 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3080 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 542 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 460 ; 0.197 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2622 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1820 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 212 ; 0.167 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.253 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 61 ; 0.307 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.163 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1846 ; 2.765 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 686 ; 1.032 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2777 ; 3.178 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1200 ; 5.446 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1045 ; 7.142 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 4 A 82 4 REMARK 3 1 B 4 B 82 4 REMARK 3 1 C 4 C 82 4 REMARK 3 1 D 4 D 82 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1222 ; 0.70 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1222 ; 0.67 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1222 ; 0.60 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 1222 ; 0.63 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1222 ; 1.52 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1222 ; 1.71 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1222 ; 1.55 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 1222 ; 1.48 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 82 REMARK 3 RESIDUE RANGE : B 1 B 82 REMARK 3 ORIGIN FOR THE GROUP (A): 41.8928 9.1472 18.8705 REMARK 3 T TENSOR REMARK 3 T11: 0.0012 T22: -0.0391 REMARK 3 T33: -0.0154 T12: -0.0007 REMARK 3 T13: 0.0055 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 1.0209 L22: 0.0165 REMARK 3 L33: 0.5202 L12: -0.0234 REMARK 3 L13: -0.1386 L23: -0.0329 REMARK 3 S TENSOR REMARK 3 S11: -0.0262 S12: -0.0161 S13: 0.0148 REMARK 3 S21: 0.0083 S22: 0.0081 S23: -0.0026 REMARK 3 S31: -0.0149 S32: -0.0104 S33: 0.0182 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 82 REMARK 3 RESIDUE RANGE : D 1 D 82 REMARK 3 ORIGIN FOR THE GROUP (A): 28.4752 -3.0930 -2.6562 REMARK 3 T TENSOR REMARK 3 T11: -0.0048 T22: -0.0339 REMARK 3 T33: -0.0091 T12: -0.0054 REMARK 3 T13: -0.0052 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.8055 L22: 0.0504 REMARK 3 L33: 0.5528 L12: -0.1005 REMARK 3 L13: 0.0393 L23: 0.0948 REMARK 3 S TENSOR REMARK 3 S11: 0.0240 S12: 0.0160 S13: -0.0400 REMARK 3 S21: 0.0049 S22: -0.0033 S23: 0.0132 REMARK 3 S31: 0.0604 S32: -0.0143 S33: -0.0208 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1VQ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000002051. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9865 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 4.2), CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29272 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 49.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.46700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1T4A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.0% GLYCEROL, 24.0% PEG-1500,, VAPOR REMARK 280 DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.13500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.28350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.71650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.28350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.13500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.71650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 MET B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 MET C -11 REMARK 465 GLY C -10 REMARK 465 SER C -9 REMARK 465 ASP C -8 REMARK 465 LYS C -7 REMARK 465 ILE C -6 REMARK 465 HIS C -5 REMARK 465 MET D -11 REMARK 465 GLY D -10 REMARK 465 SER D -9 REMARK 465 ASP D -8 REMARK 465 LYS D -7 REMARK 465 ILE D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 29 CZ NH1 NH2 REMARK 470 GLU A 52 CD OE1 OE2 REMARK 470 LYS A 56 NZ REMARK 470 LYS A 63 CD CE NZ REMARK 470 HIS B -1 CD2 NE2 REMARK 470 ARG B 17 NH1 NH2 REMARK 470 GLU B 52 CD OE1 OE2 REMARK 470 GLU B 55 CD OE1 OE2 REMARK 470 LYS B 63 NZ REMARK 470 ARG C 20 NE CZ NH1 NH2 REMARK 470 GLU C 50 CG CD OE1 OE2 REMARK 470 GLU C 52 OE1 OE2 REMARK 470 LYS C 54 CD CE NZ REMARK 470 LYS C 56 CE NZ REMARK 470 LYS C 63 CD CE NZ REMARK 470 LYS D 37 CD CE NZ REMARK 470 LYS D 54 CG CD CE NZ REMARK 470 GLU D 59 CG CD OE1 OE2 REMARK 470 LYS D 63 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 68 -41.66 -160.17 REMARK 500 LEU B 68 -48.69 -154.94 REMARK 500 LEU C 68 -49.08 -156.64 REMARK 500 LEU D 68 -50.54 -151.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 283109 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 CLONING ARTIFACT: THIS GENE USES AN ALTERNATE INITIATION REMARK 999 CODON THAT RESULTS IN A LEUCINE AT POSITION 1 WHEN REMARK 999 EXPRESSED AS A FUSION WITH THE PURIFICATION TAG DBREF 1VQ3 A 1 82 UNP Q9X0X1 Q9X0X1_THEMA 1 82 DBREF 1VQ3 B 1 82 UNP Q9X0X1 Q9X0X1_THEMA 1 82 DBREF 1VQ3 C 1 82 UNP Q9X0X1 Q9X0X1_THEMA 1 82 DBREF 1VQ3 D 1 82 UNP Q9X0X1 Q9X0X1_THEMA 1 82 SEQADV 1VQ3 MET A -11 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 GLY A -10 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 SER A -9 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 ASP A -8 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 LYS A -7 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 ILE A -6 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS A -5 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS A -4 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS A -3 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS A -2 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS A -1 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS A 0 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 LEU A 1 UNP Q9X0X1 MET 1 SEE REMARK 999 SEQADV 1VQ3 MET B -11 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 GLY B -10 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 SER B -9 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 ASP B -8 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 LYS B -7 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 ILE B -6 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS B -5 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS B -4 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS B -3 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS B -2 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS B -1 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS B 0 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 LEU B 1 UNP Q9X0X1 MET 1 SEE REMARK 999 SEQADV 1VQ3 MET C -11 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 GLY C -10 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 SER C -9 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 ASP C -8 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 LYS C -7 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 ILE C -6 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS C -5 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS C -4 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS C -3 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS C -2 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS C -1 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS C 0 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 LEU C 1 UNP Q9X0X1 MET 1 SEE REMARK 999 SEQADV 1VQ3 MET D -11 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 GLY D -10 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 SER D -9 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 ASP D -8 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 LYS D -7 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 ILE D -6 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS D -5 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS D -4 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS D -3 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS D -2 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS D -1 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 HIS D 0 UNP Q9X0X1 EXPRESSION TAG SEQADV 1VQ3 LEU D 1 UNP Q9X0X1 MET 1 SEE REMARK 999 SEQRES 1 A 94 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS LEU SEQRES 2 A 94 PRO LEU PHE LYS PHE ALA ILE ASP VAL GLN TYR ARG SER SEQRES 3 A 94 ASN VAL ARG ASP PRO ARG GLY GLU THR ILE GLU ARG VAL SEQRES 4 A 94 LEU ARG GLU GLU LYS GLY LEU PRO VAL LYS LYS LEU ARG SEQRES 5 A 94 LEU GLY LYS SER ILE HIS LEU GLU VAL GLU ALA GLU ASN SEQRES 6 A 94 LYS GLU LYS ALA TYR GLU ILE VAL LYS LYS ALA CYS GLU SEQRES 7 A 94 GLU LEU LEU VAL ASN PRO VAL VAL GLU GLU TYR GLU VAL SEQRES 8 A 94 ARG GLU LEU SEQRES 1 B 94 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS LEU SEQRES 2 B 94 PRO LEU PHE LYS PHE ALA ILE ASP VAL GLN TYR ARG SER SEQRES 3 B 94 ASN VAL ARG ASP PRO ARG GLY GLU THR ILE GLU ARG VAL SEQRES 4 B 94 LEU ARG GLU GLU LYS GLY LEU PRO VAL LYS LYS LEU ARG SEQRES 5 B 94 LEU GLY LYS SER ILE HIS LEU GLU VAL GLU ALA GLU ASN SEQRES 6 B 94 LYS GLU LYS ALA TYR GLU ILE VAL LYS LYS ALA CYS GLU SEQRES 7 B 94 GLU LEU LEU VAL ASN PRO VAL VAL GLU GLU TYR GLU VAL SEQRES 8 B 94 ARG GLU LEU SEQRES 1 C 94 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS LEU SEQRES 2 C 94 PRO LEU PHE LYS PHE ALA ILE ASP VAL GLN TYR ARG SER SEQRES 3 C 94 ASN VAL ARG ASP PRO ARG GLY GLU THR ILE GLU ARG VAL SEQRES 4 C 94 LEU ARG GLU GLU LYS GLY LEU PRO VAL LYS LYS LEU ARG SEQRES 5 C 94 LEU GLY LYS SER ILE HIS LEU GLU VAL GLU ALA GLU ASN SEQRES 6 C 94 LYS GLU LYS ALA TYR GLU ILE VAL LYS LYS ALA CYS GLU SEQRES 7 C 94 GLU LEU LEU VAL ASN PRO VAL VAL GLU GLU TYR GLU VAL SEQRES 8 C 94 ARG GLU LEU SEQRES 1 D 94 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS LEU SEQRES 2 D 94 PRO LEU PHE LYS PHE ALA ILE ASP VAL GLN TYR ARG SER SEQRES 3 D 94 ASN VAL ARG ASP PRO ARG GLY GLU THR ILE GLU ARG VAL SEQRES 4 D 94 LEU ARG GLU GLU LYS GLY LEU PRO VAL LYS LYS LEU ARG SEQRES 5 D 94 LEU GLY LYS SER ILE HIS LEU GLU VAL GLU ALA GLU ASN SEQRES 6 D 94 LYS GLU LYS ALA TYR GLU ILE VAL LYS LYS ALA CYS GLU SEQRES 7 D 94 GLU LEU LEU VAL ASN PRO VAL VAL GLU GLU TYR GLU VAL SEQRES 8 D 94 ARG GLU LEU FORMUL 5 HOH *301(H2 O) HELIX 1 1 ASP A 18 GLU A 31 1 14 HELIX 2 2 ASN A 53 LEU A 68 1 16 HELIX 3 3 ASP B 18 GLU B 31 1 14 HELIX 4 4 ASN B 53 LEU B 68 1 16 HELIX 5 5 ASP C 18 GLU C 31 1 14 HELIX 6 6 ASN C 53 LEU C 68 1 16 HELIX 7 7 ASP D 18 GLU D 31 1 14 HELIX 8 8 ASN D 53 LEU D 68 1 16 SHEET 1 A 6 GLU A 75 GLU A 81 0 SHEET 2 A 6 LEU A 3 TYR A 12 -1 N ASP A 9 O GLU A 78 SHEET 3 A 6 VAL A 36 GLU A 50 -1 O ILE A 45 N ILE A 8 SHEET 4 A 6 VAL B 36 GLU B 50 -1 O ARG B 40 N HIS A 46 SHEET 5 A 6 LEU B 3 TYR B 12 -1 N PHE B 6 O LEU B 47 SHEET 6 A 6 GLU B 75 GLU B 81 -1 O GLU B 78 N ASP B 9 SHEET 1 B 6 GLU C 75 GLU C 81 0 SHEET 2 B 6 LEU C 3 TYR C 12 -1 N ALA C 7 O ARG C 80 SHEET 3 B 6 VAL C 36 GLU C 50 -1 O LEU C 47 N PHE C 6 SHEET 4 B 6 VAL D 36 GLU D 50 -1 O SER D 44 N GLY C 42 SHEET 5 B 6 LEU D 3 TYR D 12 -1 N ILE D 8 O ILE D 45 SHEET 6 B 6 GLU D 75 GLU D 81 -1 O GLU D 78 N ASP D 9 CRYST1 58.270 73.433 92.567 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017161 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010803 0.00000