PDB Short entry for 1WE6 HEADER GENE REGULATION 24-MAY-04 1WE6 TITLE SOLUTION STRUCTURE OF UBIQUITIN-LIKE DOMAIN IN SPLICING FACTOR TITLE 2 AAL91182 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPLICING FACTOR, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBIQUITIN-LIKE DOMAIN; COMPND 5 SYNONYM: SPLICING FACTOR AAL91182; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: RAFL06-12-F22; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P030212-82; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS STRUCTURAL GENOMICS, UBIQUITIN-LIKE DOMAIN, SPLICING FACTOR, RIKEN KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, GENE REGULATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 02-MAR-22 1WE6 1 REMARK SEQADV REVDAT 2 24-FEB-09 1WE6 1 VERSN REVDAT 1 24-NOV-04 1WE6 0 JRNL AUTH F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF UBIQUITIN-LIKE DOMAIN IN SPLICING JRNL TITL 2 FACTOR AAL91182 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.29 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT,P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WE6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-04. REMARK 100 THE DEPOSITION ID IS D_1000023483. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8MM U-15, 13C; 20MM PHOSPHATE REMARK 210 BUFFER NA; 100MM NACL; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.863, CYANA 2.0.29 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 149.03 173.44 REMARK 500 1 SER A 12 48.61 -89.62 REMARK 500 1 ALA A 13 36.41 173.32 REMARK 500 1 GLN A 23 -32.85 -35.09 REMARK 500 1 ASN A 36 41.05 76.09 REMARK 500 1 ASN A 38 -59.33 -167.57 REMARK 500 1 GLN A 41 148.26 -170.09 REMARK 500 1 GLU A 52 153.71 -41.93 REMARK 500 1 VAL A 54 -32.31 -39.04 REMARK 500 1 PHE A 80 108.54 -42.65 REMARK 500 1 ALA A 94 66.66 35.15 REMARK 500 1 GLU A 104 94.70 64.04 REMARK 500 1 SER A 106 -70.39 -65.33 REMARK 500 1 PRO A 108 0.70 -69.75 REMARK 500 2 SER A 2 -41.12 -159.15 REMARK 500 2 SER A 3 144.88 61.29 REMARK 500 2 GLN A 23 -33.45 -34.52 REMARK 500 2 GLU A 52 157.97 -43.12 REMARK 500 2 LYS A 60 -71.36 -56.73 REMARK 500 2 ALA A 62 -35.35 -38.46 REMARK 500 2 ALA A 69 -35.04 -37.63 REMARK 500 2 PHE A 80 97.20 -51.96 REMARK 500 2 ALA A 94 43.42 -80.21 REMARK 500 2 SER A 109 129.36 71.41 REMARK 500 3 SER A 2 97.18 -169.89 REMARK 500 3 SER A 5 119.02 175.66 REMARK 500 3 ALA A 13 53.94 -108.73 REMARK 500 3 GLN A 23 -34.41 -35.08 REMARK 500 3 ASN A 36 90.60 63.26 REMARK 500 3 GLU A 37 179.38 50.18 REMARK 500 3 GLU A 52 154.44 -37.72 REMARK 500 3 VAL A 54 -31.86 -38.87 REMARK 500 3 ALA A 62 -34.63 -36.99 REMARK 500 3 ALA A 69 -34.61 -38.66 REMARK 500 3 PHE A 80 97.50 -49.19 REMARK 500 3 ASN A 91 81.31 69.02 REMARK 500 3 ALA A 94 74.51 -67.88 REMARK 500 3 GLU A 104 -62.46 -142.83 REMARK 500 3 SER A 109 148.96 65.82 REMARK 500 4 SER A 12 38.55 -82.98 REMARK 500 4 ALA A 13 44.89 -177.58 REMARK 500 4 GLN A 23 -31.30 -35.63 REMARK 500 4 ASN A 36 178.35 70.15 REMARK 500 4 GLU A 37 125.67 -36.50 REMARK 500 4 GLN A 48 -39.55 -37.18 REMARK 500 4 GLU A 52 157.35 -38.12 REMARK 500 4 PHE A 80 119.20 -37.85 REMARK 500 4 ASN A 91 71.87 65.70 REMARK 500 4 ALA A 94 46.89 -87.06 REMARK 500 4 SER A 106 42.07 -178.18 REMARK 500 REMARK 500 THIS ENTRY HAS 263 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ATR001004705.1 RELATED DB: TARGETDB DBREF 1WE6 A 8 105 UNP Q8RXF1 SF3A1_ARATH 683 780 SEQADV 1WE6 GLY A 1 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 SER A 2 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 SER A 3 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 GLY A 4 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 SER A 5 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 SER A 6 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 GLY A 7 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 SER A 106 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 GLY A 107 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 PRO A 108 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 SER A 109 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 SER A 110 UNP Q8RXF1 CLONING ARTIFACT SEQADV 1WE6 GLY A 111 UNP Q8RXF1 CLONING ARTIFACT SEQRES 1 A 111 GLY SER SER GLY SER SER GLY LYS PHE ASP GLU SER ALA SEQRES 2 A 111 LEU VAL PRO GLU ASP GLN PHE LEU ALA GLN HIS PRO GLY SEQRES 3 A 111 PRO ALA THR ILE ARG VAL SER LYS PRO ASN GLU ASN ASP SEQRES 4 A 111 GLY GLN PHE MET GLU ILE THR VAL GLN SER LEU SER GLU SEQRES 5 A 111 ASN VAL GLY SER LEU LYS GLU LYS ILE ALA GLY GLU ILE SEQRES 6 A 111 GLN ILE PRO ALA ASN LYS GLN LYS LEU SER GLY LYS ALA SEQRES 7 A 111 GLY PHE LEU LYS ASP ASN MET SER LEU ALA HIS TYR ASN SEQRES 8 A 111 VAL GLY ALA GLY GLU ILE LEU THR LEU SER LEU ARG GLU SEQRES 9 A 111 ARG SER GLY PRO SER SER GLY HELIX 1 1 GLU A 17 GLN A 23 1 7 HELIX 2 2 VAL A 54 GLU A 64 1 11 SHEET 1 A 4 MET A 43 VAL A 47 0 SHEET 2 A 4 ALA A 28 VAL A 32 -1 N VAL A 32 O MET A 43 SHEET 3 A 4 ILE A 97 SER A 101 1 O LEU A 98 N ARG A 31 SHEET 4 A 4 LYS A 73 SER A 75 -1 N LYS A 73 O SER A 101 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000