PDB Short entry for 1WXI
HEADER    LIGASE                                  23-JAN-05   1WXI              
TITLE     E.COLI NAD SYNTHETASE, AMP.PP                                         
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: NH(3)-DEPENDENT NAD(+) SYNTHETASE;                         
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: NAD SYNTHETASE, NITROGEN-REGULATORY PROTEIN;                
COMPND   5 EC: 6.3.1.5;                                                         
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;                               
SOURCE   3 ORGANISM_TAXID: 562;                                                 
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PRSETHE                                   
KEYWDS    NADE, NAD, E.COLI, LIGASE                                             
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.JAUCH,A.HUMM,R.HUBER,M.C.WAHL                                       
REVDAT   6   13-MAR-24 1WXI    1       REMARK LINK                              
REVDAT   5   26-JUN-13 1WXI    1       REMARK                                   
REVDAT   4   13-JUL-11 1WXI    1       VERSN                                    
REVDAT   3   24-FEB-09 1WXI    1       VERSN                                    
REVDAT   2   19-APR-05 1WXI    1       JRNL                                     
REVDAT   1   15-FEB-05 1WXI    0                                                
JRNL        AUTH   R.JAUCH,A.HUMM,R.HUBER,M.C.WAHL                              
JRNL        TITL   STRUCTURES OF ESCHERICHIA COLI NAD SYNTHETASE WITH           
JRNL        TITL 2 SUBSTRATES AND PRODUCTS REVEAL MECHANISTIC REARRANGEMENTS    
JRNL        REF    J.BIOL.CHEM.                  V. 280 15131 2005              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   15699042                                                     
JRNL        DOI    10.1074/JBC.M413195200                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.70 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 30.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : NULL                           
REMARK   3   NUMBER OF REFLECTIONS             : 29229                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.176                           
REMARK   3   FREE R VALUE                     : 0.205                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 1454                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2050                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 57                                      
REMARK   3   SOLVENT ATOMS            : 277                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.005                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.100                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL                            
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : NULL                                      
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1WXI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JAN-05.                  
REMARK 100 THE DEPOSITION ID IS D_1000024118.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 295                                
REMARK 200  PH                             : 5.2                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RU200                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : YALE MIRRORS                       
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 29229                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.700                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 91.6                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 30.00                    
REMARK 200  COMPLETENESS FOR SHELL     (%) : 87.6                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 48.20                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, MAGNESIUM CHLORIDE, SODIUM       
REMARK 280  -ACETATE, LITHIUM-META-TANTALATE, PH 5.2, VAPOR DIFFUSION,          
REMARK 280  TEMPERATURE 295K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       46.22200            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       33.96100            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       46.22200            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       33.96100            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 8910 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 21450 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000       80.53984            
REMARK 350   BIOMT2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000 -1.000000       46.90704            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     PRO A   210                                                      
REMARK 465     THR A   211                                                      
REMARK 465     ALA A   212                                                      
REMARK 465     ASP A   213                                                      
REMARK 465     LEU A   214                                                      
REMARK 465     GLU A   215                                                      
REMARK 465     ASP A   216                                                      
REMARK 465     ASP A   217                                                      
REMARK 465     ARG A   218                                                      
REMARK 465     PRO A   219                                                      
REMARK 465     SER A   220                                                      
REMARK 465     LEU A   221                                                      
REMARK 465     PRO A   222                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    HOH A   716     O    HOH A   716     2656     1.95            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ARG A 186      -27.33    119.88                                   
REMARK 500    TYR A 206       -2.15   -140.86                                   
REMARK 500    LYS A 208      150.79     68.04                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 600  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A  52   OD2                                                    
REMARK 620 2 GLU A 165   OE1  74.7                                              
REMARK 620 3 AMP A 400   O2P 152.0  79.0                                        
REMARK 620 4 DPO A 500   O7   73.2  87.2 115.2                                  
REMARK 620 5 DPO A 500   O1  115.3 166.7  92.2  87.6                            
REMARK 620 6 HOH A 880   O    80.8  77.3  84.4 152.5 112.0                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 700  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 AMP A 400   O1P                                                    
REMARK 620 2 DPO A 500   O3  102.4                                              
REMARK 620 3 DPO A 500   O5   98.7  59.4                                        
REMARK 620 4 HOH A 729   O   157.7  57.7  63.5                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 600                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 700                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 300                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 400                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DPO A 500                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1WXE   RELATED DB: PDB                                   
REMARK 900 E.COLI NAD SYNTHETASE, AMP                                           
REMARK 900 RELATED ID: 1WXF   RELATED DB: PDB                                   
REMARK 900 E.COLI NAD SYNTHETASE                                                
REMARK 900 RELATED ID: 1WXG   RELATED DB: PDB                                   
REMARK 900 E.COLI NAD SYNTHETASE, DND                                           
REMARK 900 RELATED ID: 1WXH   RELATED DB: PDB                                   
REMARK 900 E.COLI NAD SYNTHETASE, NAD                                           
DBREF  1WXI A    1   275  UNP    P18843   NADE_ECOLI       1    275             
SEQRES   1 A  275  MET THR LEU GLN GLN GLN ILE ILE LYS ALA LEU GLY ALA          
SEQRES   2 A  275  LYS PRO GLN ILE ASN ALA GLU GLU GLU ILE ARG ARG SER          
SEQRES   3 A  275  VAL ASP PHE LEU LYS SER TYR LEU GLN THR TYR PRO PHE          
SEQRES   4 A  275  ILE LYS SER LEU VAL LEU GLY ILE SER GLY GLY GLN ASP          
SEQRES   5 A  275  SER THR LEU ALA GLY LYS LEU CYS GLN MET ALA ILE ASN          
SEQRES   6 A  275  GLU LEU ARG LEU GLU THR GLY ASN GLU SER LEU GLN PHE          
SEQRES   7 A  275  ILE ALA VAL ARG LEU PRO TYR GLY VAL GLN ALA ASP GLU          
SEQRES   8 A  275  GLN ASP CYS GLN ASP ALA ILE ALA PHE ILE GLN PRO ASP          
SEQRES   9 A  275  ARG VAL LEU THR VAL ASN ILE LYS GLY ALA VAL LEU ALA          
SEQRES  10 A  275  SER GLU GLN ALA LEU ARG GLU ALA GLY ILE GLU LEU SER          
SEQRES  11 A  275  ASP PHE VAL ARG GLY ASN GLU LYS ALA ARG GLU ARG MET          
SEQRES  12 A  275  LYS ALA GLN TYR SER ILE ALA GLY MET THR SER GLY VAL          
SEQRES  13 A  275  VAL VAL GLY THR ASP HIS ALA ALA GLU ALA ILE THR GLY          
SEQRES  14 A  275  PHE PHE THR LYS TYR GLY ASP GLY GLY THR ASP ILE ASN          
SEQRES  15 A  275  PRO LEU TYR ARG LEU ASN LYS ARG GLN GLY LYS GLN LEU          
SEQRES  16 A  275  LEU ALA ALA LEU ALA CYS PRO GLU HIS LEU TYR LYS LYS          
SEQRES  17 A  275  ALA PRO THR ALA ASP LEU GLU ASP ASP ARG PRO SER LEU          
SEQRES  18 A  275  PRO ASP GLU VAL ALA LEU GLY VAL THR TYR ASP ASN ILE          
SEQRES  19 A  275  ASP ASP TYR LEU GLU GLY LYS ASN VAL PRO GLN GLN VAL          
SEQRES  20 A  275  ALA ARG THR ILE GLU ASN TRP TYR LEU LYS THR GLU HIS          
SEQRES  21 A  275  LYS ARG ARG PRO PRO ILE THR VAL PHE ASP ASP PHE TRP          
SEQRES  22 A  275  LYS LYS                                                      
HET     MG  A 600       1                                                       
HET     MG  A 700       1                                                       
HET    AMP  A 300      23                                                       
HET    AMP  A 400      23                                                       
HET    DPO  A 500       9                                                       
HETNAM      MG MAGNESIUM ION                                                    
HETNAM     AMP ADENOSINE MONOPHOSPHATE                                          
HETNAM     DPO DIPHOSPHATE                                                      
FORMUL   2   MG    2(MG 2+)                                                     
FORMUL   4  AMP    2(C10 H14 N5 O7 P)                                           
FORMUL   6  DPO    O7 P2 4-                                                     
FORMUL   7  HOH   *277(H2 O)                                                    
HELIX    1   1 THR A    2  GLY A   12  1                                  11    
HELIX    2   2 ASN A   18  TYR A   37  1                                  20    
HELIX    3   3 GLY A   50  GLY A   72  1                                  23    
HELIX    4   4 ASP A   90  GLN A  102  1                                  13    
HELIX    5   5 ILE A  111  GLY A  126  1                                  16    
HELIX    6   6 SER A  130  THR A  153  1                                  24    
HELIX    7   7 HIS A  162  ILE A  167  1                                   6    
HELIX    8   8 ASN A  188  LEU A  199  1                                  12    
HELIX    9   9 PRO A  202  TYR A  206  5                                   5    
HELIX   10  10 ASP A  223  GLY A  228  1                                   6    
HELIX   11  11 THR A  230  GLU A  239  1                                  10    
HELIX   12  12 PRO A  244  THR A  258  1                                  15    
HELIX   13  13 GLU A  259  ARG A  263  5                                   5    
HELIX   14  14 ASP A  271  LYS A  275  5                                   5    
SHEET    1   A 4 ARG A 105  THR A 108  0                                        
SHEET    2   A 4 GLN A  77  ARG A  82  1  N  ARG A  82   O  LEU A 107           
SHEET    3   A 4 SER A  42  GLY A  46  1  N  LEU A  43   O  ILE A  79           
SHEET    4   A 4 GLY A 155  VAL A 157  1  O  VAL A 156   N  VAL A  44           
LINK         OD2 ASP A  52                MG    MG A 600     1555   1555  2.42  
LINK         OE1 GLU A 165                MG    MG A 600     1555   1555  2.49  
LINK         O2P AMP A 400                MG    MG A 600     1555   1555  2.61  
LINK         O1P AMP A 400                MG    MG A 700     1555   1555  2.60  
LINK         O7  DPO A 500                MG    MG A 600     1555   1555  2.67  
LINK         O1  DPO A 500                MG    MG A 600     1555   1555  2.60  
LINK         O3  DPO A 500                MG    MG A 700     1555   1555  2.81  
LINK         O5  DPO A 500                MG    MG A 700     1555   1555  2.86  
LINK        MG    MG A 600                 O   HOH A 880     1555   1555  2.44  
LINK        MG    MG A 700                 O   HOH A 729     1555   1555  2.67  
SITE     1 AC1  5 ASP A  52  GLU A 165  AMP A 400  DPO A 500                    
SITE     2 AC1  5 HOH A 880                                                     
SITE     1 AC2  3 AMP A 400  DPO A 500  HOH A 729                               
SITE     1 AC3 14 TYR A  33  ASN A 136  ARG A 140  TYR A 147                    
SITE     2 AC3 14 GLY A 155  PHE A 171  THR A 172  LYS A 173                    
SITE     3 AC3 14 ASP A 180  HIS A 260  LYS A 261  HOH A 775                    
SITE     4 AC3 14 HOH A 799  HOH A 879                                          
SITE     1 AC4 16 GLY A  46  ILE A  47  SER A  48  SER A  53                    
SITE     2 AC4 16 ARG A  82  LEU A  83  GLN A  88  ARG A 142                    
SITE     3 AC4 16 THR A 160  GLU A 165  ASP A 176  DPO A 500                    
SITE     4 AC4 16  MG A 600   MG A 700  HOH A 712  HOH A 892                    
SITE     1 AC5 14 SER A  48  GLY A  50  GLN A  51  ASP A  52                    
SITE     2 AC5 14 SER A  53  GLU A 165  LYS A 189  AMP A 400                    
SITE     3 AC5 14  MG A 600   MG A 700  HOH A 710  HOH A 729                    
SITE     4 AC5 14 HOH A 873  HOH A 881                                          
CRYST1   92.444   67.922   48.394  90.00 104.24  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010817  0.000000  0.002745        0.00000                         
SCALE2      0.000000  0.014723  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.021319        0.00000