PDB Short entry for 1WZG HEADER OXIDOREDUCTASE 04-MAR-05 1WZG TITLE CRYSTAL STRUCTURE OF AN ARTIFICIAL METALLOPROTEIN: FE(SALOPHEN)/WILD TITLE 2 TYPE HEME OXYGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEME OXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.14.99.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE; SOURCE 3 ORGANISM_TAXID: 1717; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMW172-A KEYWDS ELECTRON-TRANSFER, ARTIFICIAL METALLOPROTEIN, HEME OXYGENASE, KEYWDS 2 SALOPHEN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.UNNO,N.YOKOI,T.UENO,Y.WATANABE,M.IKEDA-SAITO REVDAT 5 13-MAR-24 1WZG 1 REMARK LINK REVDAT 4 13-JUL-11 1WZG 1 VERSN REVDAT 3 24-FEB-09 1WZG 1 VERSN REVDAT 2 15-AUG-06 1WZG 1 JRNL REVDAT 1 21-FEB-06 1WZG 0 JRNL AUTH T.UENO,N.YOKOI,M.UNNO,T.MATSUI,Y.TOKITA,M.YAMADA, JRNL AUTH 2 M.IKEDA-SAITO,H.NAKAJIMA,Y.WATANABE JRNL TITL DESIGN OF METAL COFACTORS ACTIVATED BY A PROTEIN-PROTEIN JRNL TITL 2 ELECTRON TRANSFER SYSTEM. JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 9416 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16769893 JRNL DOI 10.1073/PNAS.0510968103 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 36009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3993 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2375 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 278 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3286 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 391 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.35000 REMARK 3 B22 (A**2) : -12.05000 REMARK 3 B33 (A**2) : 0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.871 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3439 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4669 ; 1.392 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 416 ; 4.781 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;34.707 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 546 ;13.447 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;14.302 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 498 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2666 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1804 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2375 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 337 ; 0.145 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 44 ; 0.163 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.139 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2117 ; 0.803 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3283 ; 1.300 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1474 ; 2.330 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1384 ; 3.503 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): -4.6910 3.1610 35.6060 REMARK 3 T TENSOR REMARK 3 T11: -0.0416 T22: 0.0565 REMARK 3 T33: -0.1017 T12: 0.0051 REMARK 3 T13: 0.0078 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.2588 L22: 0.4232 REMARK 3 L33: 0.8596 L12: 0.0551 REMARK 3 L13: 0.4152 L23: -0.1936 REMARK 3 S TENSOR REMARK 3 S11: 0.0034 S12: 0.0102 S13: -0.0031 REMARK 3 S21: 0.0496 S22: -0.0115 S23: -0.0206 REMARK 3 S31: -0.0341 S32: -0.0374 S33: 0.0081 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 215 REMARK 3 ORIGIN FOR THE GROUP (A): -17.2230 19.3600 -1.0320 REMARK 3 T TENSOR REMARK 3 T11: -0.0364 T22: 0.0374 REMARK 3 T33: -0.0952 T12: -0.0079 REMARK 3 T13: -0.0247 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.2873 L22: 0.2696 REMARK 3 L33: 1.1418 L12: 0.0354 REMARK 3 L13: -0.1896 L23: -0.4452 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: 0.0077 S13: -0.0017 REMARK 3 S21: -0.0044 S22: 0.0231 S23: -0.0351 REMARK 3 S31: 0.0051 S32: -0.0114 S33: 0.0252 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 901 A 901 REMARK 3 ORIGIN FOR THE GROUP (A): -3.3610 11.7420 36.4320 REMARK 3 T TENSOR REMARK 3 T11: 0.1800 T22: 0.1230 REMARK 3 T33: 0.1009 T12: 0.0829 REMARK 3 T13: 0.0604 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 26.9349 L22: 9.6434 REMARK 3 L33: 0.1378 L12: -8.6844 REMARK 3 L13: 0.7410 L23: -1.1354 REMARK 3 S TENSOR REMARK 3 S11: 1.6872 S12: 1.3133 S13: -0.8149 REMARK 3 S21: -0.5683 S22: -0.6918 S23: 3.8110 REMARK 3 S31: 1.1019 S32: -1.6443 S33: -0.9954 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 902 B 902 REMARK 3 ORIGIN FOR THE GROUP (A): -17.1350 28.3720 0.5200 REMARK 3 T TENSOR REMARK 3 T11: 0.0351 T22: 0.0179 REMARK 3 T33: -0.0340 T12: -0.0055 REMARK 3 T13: -0.1607 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 0.0421 L22: 10.1260 REMARK 3 L33: 95.7776 L12: -0.6529 REMARK 3 L13: -2.0079 L23: 31.1423 REMARK 3 S TENSOR REMARK 3 S11: -1.6261 S12: -0.4382 S13: -1.1573 REMARK 3 S21: -0.4738 S22: 0.1171 S23: -1.4389 REMARK 3 S31: -3.6124 S32: -1.6798 S33: 1.5089 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1WZG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000024187. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40022 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, AMMONIUM SULFATE, PEG2000MME, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.44200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 ALA B 4 REMARK 465 THR B 5 REMARK 465 ALA B 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 GLU A 184 CG CD OE1 OE2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 LYS B 22 CG CD CE NZ REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 LYS B 170 CG CD CE NZ REMARK 470 GLU B 184 CG CD OE1 OE2 REMARK 470 LYS B 213 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 37 -129.03 -104.65 REMARK 500 LEU B 37 -125.94 -99.74 REMARK 500 LEU B 73 56.29 -90.51 REMARK 500 SER B 93 -179.79 -176.13 REMARK 500 SER B 138 -82.90 -123.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YOM A 901 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 20 NE2 REMARK 620 2 YOM A 901 NA 99.5 REMARK 620 3 YOM A 901 OA 147.5 85.7 REMARK 620 4 YOM A 901 NB 85.7 74.4 126.2 REMARK 620 5 YOM A 901 OB 90.5 158.5 96.0 87.6 REMARK 620 6 GLU A 24 OE1 74.5 104.7 73.2 159.8 96.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YOM B 902 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 20 NE2 REMARK 620 2 YOM B 902 NA 96.9 REMARK 620 3 YOM B 902 OA 152.6 86.1 REMARK 620 4 YOM B 902 NB 84.5 75.8 122.4 REMARK 620 5 YOM B 902 OB 94.1 159.8 92.0 88.5 REMARK 620 6 GLU B 24 OE2 75.0 95.6 77.6 156.8 103.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YOM A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YOM B 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1IW0 RELATED DB: PDB REMARK 900 WILD TYPE FERRIC HEME-HMUO REMARK 900 RELATED ID: 1IW1 RELATED DB: PDB REMARK 900 WILD TYPE FERROUS HEME-HMUO REMARK 900 RELATED ID: 1V8X RELATED DB: PDB REMARK 900 DIOXYGEN BOUND HEME-HMUO REMARK 900 RELATED ID: 1WZD RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH YOK REMARK 900 RELATED ID: 1WZF RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH YOL DBREF 1WZG A 1 215 UNP P71119 HMUO_CORDI 1 215 DBREF 1WZG B 1 215 UNP P71119 HMUO_CORDI 1 215 SEQADV 1WZG LYS A 34 UNP P71119 GLU 34 SEE REMARK 999 SEQADV 1WZG VAL A 60 UNP P71119 ALA 60 SEE REMARK 999 SEQADV 1WZG GLY A 92 UNP P71119 ASP 92 SEE REMARK 999 SEQADV 1WZG SER A 93 UNP P71119 GLY 93 SEE REMARK 999 SEQADV 1WZG HIS A 192 UNP P71119 ASN 192 SEE REMARK 999 SEQADV 1WZG LYS B 34 UNP P71119 GLU 34 SEE REMARK 999 SEQADV 1WZG VAL B 60 UNP P71119 ALA 60 SEE REMARK 999 SEQADV 1WZG GLY B 92 UNP P71119 ASP 92 SEE REMARK 999 SEQADV 1WZG SER B 93 UNP P71119 GLY 93 SEE REMARK 999 SEQADV 1WZG HIS B 192 UNP P71119 ASN 192 SEE REMARK 999 SEQRES 1 A 215 MET THR THR ALA THR ALA GLY LEU ALA VAL GLU LEU LYS SEQRES 2 A 215 GLN SER THR ALA GLN ALA HIS GLU LYS ALA GLU HIS SER SEQRES 3 A 215 THR PHE MET SER ASP LEU LEU LYS GLY ARG LEU GLY VAL SEQRES 4 A 215 ALA GLU PHE THR ARG LEU GLN GLU GLN ALA TRP LEU PHE SEQRES 5 A 215 TYR THR ALA LEU GLU GLN ALA VAL ASP ALA VAL ARG ALA SEQRES 6 A 215 SER GLY PHE ALA GLU SER LEU LEU ASP PRO ALA LEU ASN SEQRES 7 A 215 ARG ALA GLU VAL LEU ALA ARG ASP LEU ASP LYS LEU ASN SEQRES 8 A 215 GLY SER SER GLU TRP ARG SER ARG ILE THR ALA SER PRO SEQRES 9 A 215 ALA VAL ILE ASP TYR VAL ASN ARG LEU GLU GLU ILE ARG SEQRES 10 A 215 ASP ASN VAL ASP GLY PRO ALA LEU VAL ALA HIS HIS TYR SEQRES 11 A 215 VAL ARG TYR LEU GLY ASP LEU SER GLY GLY GLN VAL ILE SEQRES 12 A 215 ALA ARG MET MET GLN ARG HIS TYR GLY VAL ASP PRO GLU SEQRES 13 A 215 ALA LEU GLY PHE TYR HIS PHE GLU GLY ILE ALA LYS LEU SEQRES 14 A 215 LYS VAL TYR LYS ASP GLU TYR ARG GLU LYS LEU ASN ASN SEQRES 15 A 215 LEU GLU LEU SER ASP GLU GLN ARG GLU HIS LEU LEU LYS SEQRES 16 A 215 GLU ALA THR ASP ALA PHE VAL PHE ASN HIS GLN VAL PHE SEQRES 17 A 215 ALA ASP LEU GLY LYS GLY LEU SEQRES 1 B 215 MET THR THR ALA THR ALA GLY LEU ALA VAL GLU LEU LYS SEQRES 2 B 215 GLN SER THR ALA GLN ALA HIS GLU LYS ALA GLU HIS SER SEQRES 3 B 215 THR PHE MET SER ASP LEU LEU LYS GLY ARG LEU GLY VAL SEQRES 4 B 215 ALA GLU PHE THR ARG LEU GLN GLU GLN ALA TRP LEU PHE SEQRES 5 B 215 TYR THR ALA LEU GLU GLN ALA VAL ASP ALA VAL ARG ALA SEQRES 6 B 215 SER GLY PHE ALA GLU SER LEU LEU ASP PRO ALA LEU ASN SEQRES 7 B 215 ARG ALA GLU VAL LEU ALA ARG ASP LEU ASP LYS LEU ASN SEQRES 8 B 215 GLY SER SER GLU TRP ARG SER ARG ILE THR ALA SER PRO SEQRES 9 B 215 ALA VAL ILE ASP TYR VAL ASN ARG LEU GLU GLU ILE ARG SEQRES 10 B 215 ASP ASN VAL ASP GLY PRO ALA LEU VAL ALA HIS HIS TYR SEQRES 11 B 215 VAL ARG TYR LEU GLY ASP LEU SER GLY GLY GLN VAL ILE SEQRES 12 B 215 ALA ARG MET MET GLN ARG HIS TYR GLY VAL ASP PRO GLU SEQRES 13 B 215 ALA LEU GLY PHE TYR HIS PHE GLU GLY ILE ALA LYS LEU SEQRES 14 B 215 LYS VAL TYR LYS ASP GLU TYR ARG GLU LYS LEU ASN ASN SEQRES 15 B 215 LEU GLU LEU SER ASP GLU GLN ARG GLU HIS LEU LEU LYS SEQRES 16 B 215 GLU ALA THR ASP ALA PHE VAL PHE ASN HIS GLN VAL PHE SEQRES 17 B 215 ALA ASP LEU GLY LYS GLY LEU HET SO4 A 701 5 HET SO4 A 702 5 HET SO4 A 704 5 HET SO4 A 705 5 HET SO4 A 706 5 HET YOM A 901 25 HET SO4 B 703 5 HET YOM B 902 25 HET GOL B 801 6 HETNAM SO4 SULFATE ION HETNAM YOM 2,2'-[1,2-PHENYLENEBIS(NITRILOMETHYLIDYNE) HETNAM 2 YOM ]BIS[PHENOLATO]](2-)-N,N',O,O']-IRON HETNAM GOL GLYCEROL HETSYN YOM SALOPHEN IRON CHELATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 6(O4 S 2-) FORMUL 8 YOM 2(C20 H14 FE N2 O2 2+) FORMUL 11 GOL C3 H8 O3 FORMUL 12 HOH *391(H2 O) HELIX 1 1 GLY A 7 THR A 16 1 10 HELIX 2 2 THR A 16 HIS A 25 1 10 HELIX 3 3 SER A 26 LYS A 34 1 9 HELIX 4 4 GLY A 38 GLY A 67 1 30 HELIX 5 5 ASP A 74 ASN A 78 5 5 HELIX 6 6 ARG A 79 GLY A 92 1 14 HELIX 7 7 GLU A 95 ILE A 100 1 6 HELIX 8 8 SER A 103 ASN A 119 1 17 HELIX 9 9 ASP A 121 GLY A 152 1 32 HELIX 10 10 ASP A 154 HIS A 162 5 9 HELIX 11 11 LYS A 168 LEU A 183 1 16 HELIX 12 12 SER A 186 LYS A 213 1 28 HELIX 13 13 GLY B 7 THR B 16 1 10 HELIX 14 14 THR B 16 HIS B 25 1 10 HELIX 15 15 SER B 26 LYS B 34 1 9 HELIX 16 16 GLY B 38 GLY B 67 1 30 HELIX 17 17 ASP B 74 ASN B 78 5 5 HELIX 18 18 ARG B 79 GLY B 92 1 14 HELIX 19 19 GLU B 95 ILE B 100 1 6 HELIX 20 20 SER B 103 ASN B 119 1 17 HELIX 21 21 ASP B 121 LEU B 137 1 17 HELIX 22 22 SER B 138 GLY B 152 1 15 HELIX 23 23 ASP B 154 HIS B 162 5 9 HELIX 24 24 LYS B 168 LEU B 183 1 16 HELIX 25 25 SER B 186 LYS B 213 1 28 LINK NE2 HIS A 20 FE YOM A 901 1555 1555 2.22 LINK OE1 GLU A 24 FE YOM A 901 1555 1555 2.26 LINK NE2 HIS B 20 FE YOM B 902 1555 1555 2.24 LINK OE2 GLU B 24 FE YOM B 902 1555 1555 2.26 SITE 1 AC1 6 ASN A 91 SER A 93 GLU A 95 TRP A 96 SITE 2 AC1 6 ARG A 99 HOH A1049 SITE 1 AC2 5 SER A 26 THR A 27 HIS A 205 HOH A 931 SITE 2 AC2 5 HOH A1095 SITE 1 AC3 4 SER B 26 THR B 27 HIS B 205 HOH B 932 SITE 1 AC4 4 SER A 138 LYS A 173 ARG A 177 HOH A1009 SITE 1 AC5 3 ARG A 112 HIS A 192 HOH A 941 SITE 1 AC6 12 HIS A 20 GLU A 24 VAL A 131 ARG A 132 SITE 2 AC6 12 LEU A 134 GLY A 135 SER A 138 GLY A 139 SITE 3 AC6 12 PHE A 201 ASN A 204 PHE A 208 HOH A1054 SITE 1 AC7 9 HIS B 20 GLU B 24 VAL B 131 GLY B 135 SITE 2 AC7 9 SER B 138 GLY B 139 PHE B 201 ASN B 204 SITE 3 AC7 9 PHE B 208 SITE 1 AC8 7 VAL A 39 TYR A 151 ASN B 119 ASP B 121 SITE 2 AC8 7 HIS B 192 GLU B 196 HOH B1024 CRYST1 41.471 62.884 77.991 90.00 98.89 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024113 0.000000 0.003773 0.00000 SCALE2 0.000000 0.015902 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012978 0.00000