PDB Short entry for 1XRD
HEADER    MEMBRANE PROTEIN                        14-OCT-04   1XRD              
TITLE     LIGHT-HARVESTING COMPLEX 1 ALFA SUBUNIT FROM WILD-TYPE RHODOSPIRILLUM 
TITLE    2 RUBRUM                                                               
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: LIGHT-HARVESTING PROTEIN B-880, ALPHA CHAIN;               
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: LH-1; ANTENNA PIGMENT PROTEIN, ALPHA CHAIN                  
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: RHODOSPIRILLUM RUBRUM;                          
SOURCE   3 ORGANISM_TAXID: 1085                                                 
KEYWDS    MEMBRANE SPANNING HELIX, LIGHT-HARVESTING, PIGMENT BINDING,           
KEYWDS   2 PHOTOSYNTHESIS, MEMBRANE PROTEIN                                     
EXPDTA    SOLUTION NMR                                                          
NUMMDL    10                                                                    
AUTHOR    Z.-Y.WANG,K.GOKAN,M.KOBAYASHI,T.NOZAWA                                
REVDAT   3   02-MAR-22 1XRD    1       REMARK                                   
REVDAT   2   24-FEB-09 1XRD    1       VERSN                                    
REVDAT   1   15-MAR-05 1XRD    0                                                
JRNL        AUTH   Z.-Y.WANG,K.GOKAN,M.KOBAYASHI,T.NOZAWA                       
JRNL        TITL   SOLUTION STRUCTURES OF THE CORE LIGHT-HARVESTING ALPHA AND   
JRNL        TITL 2 BETA POLYPEPTIDES FROM RHODOSPIRILLUM RUBRUM: IMPLICATIONS   
JRNL        TITL 3 FOR THE PIGMENT-PROTEIN AND PROTEIN-PROTEIN INTERACTIONS     
JRNL        REF    J.MOL.BIOL.                   V. 347   465 2005              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   15740753                                                     
JRNL        DOI    10.1016/J.JMB.2005.01.017                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : NMRPIPE 97.027, CNS 1.1                              
REMARK   3   AUTHORS     : DELAGLIO ET AL. (NMRPIPE),                           
REMARK   3  BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI,   
REMARK   3  NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS)                       
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1XRD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-OCT-04.                  
REMARK 100 THE DEPOSITION ID IS D_1000030676.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : NULL                               
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1MM LH1 ALFA SUBUNIT U-15N, 13C    
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_15N-SEPARATED_NOESY; HNHA       
REMARK 210  SPECTROMETER FIELD STRENGTH    : 400 MHZ                            
REMARK 210  SPECTROMETER MODEL             : DRX                                
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRVIEW 5.0.4                      
REMARK 210   METHOD USED                   : DISTANCE GEOMETRY, SIMULATED       
REMARK 210                                   ANNEALING                          
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 300                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 10                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 TRP A   2       29.47     44.80                                   
REMARK 500  1 ARG A   3       29.76     45.27                                   
REMARK 500  1 TRP A   5       37.58     33.89                                   
REMARK 500  1 GLN A   6       36.83     34.01                                   
REMARK 500  1 ASP A   9      -56.27   -167.02                                   
REMARK 500  1 TRP A  40      -70.68    -68.68                                   
REMARK 500  1 ALA A  44       74.25   -172.11                                   
REMARK 500  1 SER A  45       26.92     83.42                                   
REMARK 500  1 THR A  46      -57.78   -149.28                                   
REMARK 500  1 GLN A  50      -91.04     41.78                                   
REMARK 500  2 TRP A   2       34.07     38.89                                   
REMARK 500  2 ILE A   4       28.45     46.89                                   
REMARK 500  2 TRP A   5       32.86     35.12                                   
REMARK 500  2 GLN A   6       20.19   -171.59                                   
REMARK 500  2 ASP A   9      -64.49   -164.52                                   
REMARK 500  2 TRP A  40      -70.57    -67.44                                   
REMARK 500  2 ALA A  44      -86.85     39.89                                   
REMARK 500  2 VAL A  49      -48.40   -142.64                                   
REMARK 500  2 GLN A  50       84.34   -164.24                                   
REMARK 500  2 THR A  51       86.50     52.46                                   
REMARK 500  3 TRP A   5       51.23     32.55                                   
REMARK 500  3 GLN A   6      -30.08   -171.75                                   
REMARK 500  3 ASP A   9       69.27     78.69                                   
REMARK 500  3 TRP A  40      -74.91    -68.11                                   
REMARK 500  3 THR A  46      -74.04    -87.78                                   
REMARK 500  3 LYS A  47      146.60     72.70                                   
REMARK 500  3 VAL A  49      -77.75     62.74                                   
REMARK 500  3 GLN A  50      153.83     76.13                                   
REMARK 500  4 TRP A   2      -77.79     47.38                                   
REMARK 500  4 GLN A   6       87.40     90.70                                   
REMARK 500  4 LEU A   7      -42.42   -154.78                                   
REMARK 500  4 TRP A  40      -70.49    -67.55                                   
REMARK 500  4 LYS A  47       72.14   -161.44                                   
REMARK 500  5 TRP A   2       57.05     38.41                                   
REMARK 500  5 TRP A   5       35.57     35.23                                   
REMARK 500  5 GLN A   6      -84.86   -173.25                                   
REMARK 500  5 LEU A   7      -83.74     55.99                                   
REMARK 500  5 TRP A  40      -73.68    -69.75                                   
REMARK 500  5 SER A  45       26.48     80.51                                   
REMARK 500  5 THR A  46      -46.83   -149.06                                   
REMARK 500  5 LYS A  47      130.12     63.34                                   
REMARK 500  5 PRO A  48      109.14    -53.09                                   
REMARK 500  5 VAL A  49     -175.14     55.77                                   
REMARK 500  5 GLN A  50       74.20     78.06                                   
REMARK 500  6 TRP A   2       67.06     39.14                                   
REMARK 500  6 ILE A   4       18.55     59.05                                   
REMARK 500  6 TRP A   5      -23.98     86.18                                   
REMARK 500  6 LEU A   7       81.79     59.12                                   
REMARK 500  6 ARG A  11      -72.58    -63.78                                   
REMARK 500  6 TRP A  40      -75.98    -68.27                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      98 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1WRG   RELATED DB: PDB                                   
REMARK 900 LIGHT-HARVESTING COMPLEX 1 BETA SUBUNIT FROM WILD-TYPE               
REMARK 900 RHODOSPIRILLUM RUBRUM                                                
DBREF  1XRD A    1    52  UNP    P02947   LHA_RHORU        1     52             
SEQRES   1 A   52  MET TRP ARG ILE TRP GLN LEU PHE ASP PRO ARG GLN ALA          
SEQRES   2 A   52  LEU VAL GLY LEU ALA THR PHE LEU PHE VAL LEU ALA LEU          
SEQRES   3 A   52  LEU ILE HIS PHE ILE LEU LEU SER THR GLU ARG PHE ASN          
SEQRES   4 A   52  TRP LEU GLU GLY ALA SER THR LYS PRO VAL GLN THR SER          
HELIX    1   1 MET A    1  LEU A    7  5                                   7    
HELIX    2   2 ASP A    9  GLY A   43  1                                  35    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000