PDB Short entry for 1XSE HEADER OXIDOREDUCTASE 19-OCT-04 1XSE TITLE CRYSTAL STRUCTURE OF GUINEA PIG 11BETA-HYDROXYSTEROID DEHYDROGENASE TITLE 2 TYPE 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 11BETA-HYDROXYSTEROID DEHYDROGENASE TYPE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 EC: 1.1.1.146; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAVIA PORCELLUS; SOURCE 3 ORGANISM_COMMON: DOMESTIC GUINEA PIG; SOURCE 4 ORGANISM_TAXID: 10141; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS 11BETA-HYDROXYSTEROID DEHYDROGENASE DIMER, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.OGG,B.ELLEBY,C.NORSTROM,K.STEFANSSON,L.ABRAHMSEN,U.OPPERMANN, AUTHOR 2 S.SVENSSON REVDAT 7 13-MAR-24 1XSE 1 REMARK SEQADV REVDAT 6 08-AUG-18 1XSE 1 REMARK REVDAT 5 27-JUL-11 1XSE 1 REVDAT REVDAT 4 13-JUL-11 1XSE 1 VERSN REVDAT 3 24-FEB-09 1XSE 1 VERSN REVDAT 2 15-MAR-05 1XSE 1 AUTHOR JRNL REVDAT 1 16-NOV-04 1XSE 0 JRNL AUTH D.OGG,B.ELLEBY,C.NORSTROM,K.STEFANSSON,L.ABRAHMSEN, JRNL AUTH 2 U.OPPERMANN,S.SVENSSON JRNL TITL THE CRYSTAL STRUCTURE OF GUINEA PIG 11BETA-HYDROXYSTEROID JRNL TITL 2 DEHYDROGENASE TYPE 1 PROVIDES A MODEL FOR ENZYME-LIPID JRNL TITL 3 BILAYER INTERACTIONS JRNL REF J.BIOL.CHEM. V. 280 3789 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15542590 JRNL DOI 10.1074/JBC.M412463200 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0001 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 21448 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1161 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1513 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4210 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 349 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.68000 REMARK 3 B22 (A**2) : -0.68000 REMARK 3 B33 (A**2) : 1.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.630 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.319 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.216 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.054 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4394 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5954 ; 1.761 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 546 ; 6.993 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 170 ;35.620 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 756 ;20.273 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;21.223 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 680 ; 0.161 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3200 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2409 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2997 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 321 ; 0.193 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 42 ; 0.306 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.270 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2783 ; 0.564 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4340 ; 0.970 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1860 ; 1.742 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1614 ; 2.619 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 24 A 297 NULL REMARK 3 1 B 24 B 297 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1096 ; 0.05 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 1057 ; 0.54 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 1096 ; 0.13 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1057 ; 0.85 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XSE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-OCT-04. REMARK 100 THE DEPOSITION ID IS D_1000030713. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-03; 17-SEP-03 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N REMARK 200 RADIATION SOURCE : MAX II; ROTATING ANODE REMARK 200 BEAMLINE : I711; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.092; 1.5405 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111); REMARK 200 CONFOCAL MULTILAYER OPTICS REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22866 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 200.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 550 MME, BISTRIS, PH 6.5, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 59.19250 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 59.19250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 92.38600 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 59.19250 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 59.19250 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 92.38600 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 59.19250 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 59.19250 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 92.38600 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 59.19250 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 59.19250 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 92.38600 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 59.19250 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 59.19250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 92.38600 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 59.19250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 59.19250 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 92.38600 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 59.19250 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 59.19250 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 92.38600 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 59.19250 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 59.19250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 92.38600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 SER A 13 REMARK 465 SER A 14 REMARK 465 GLY A 15 REMARK 465 LEU A 16 REMARK 465 VAL A 17 REMARK 465 PRO A 18 REMARK 465 ARG A 19 REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 HIS A 22 REMARK 465 MET A 23 REMARK 465 MET B 3 REMARK 465 GLY B 4 REMARK 465 SER B 5 REMARK 465 SER B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 HIS B 12 REMARK 465 SER B 13 REMARK 465 SER B 14 REMARK 465 GLY B 15 REMARK 465 LEU B 16 REMARK 465 VAL B 17 REMARK 465 PRO B 18 REMARK 465 ARG B 19 REMARK 465 GLY B 20 REMARK 465 SER B 21 REMARK 465 HIS B 22 REMARK 465 MET B 23 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1363 O HOH A 1411 2.06 REMARK 500 O HOH A 1470 O HOH A 1507 2.14 REMARK 500 O HOH A 1376 O HOH A 1457 2.17 REMARK 500 CB VAL A 171 O HOH A 1518 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 80 CG GLU B 80 CD 0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 198 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASN A 204 N - CA - C ANGL. DEV. = 19.0 DEGREES REMARK 500 ARG A 252 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASN B 204 N - CA - C ANGL. DEV. = 17.1 DEGREES REMARK 500 LEU B 295 CA - CB - CG ANGL. DEV. = 17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 65 178.76 170.11 REMARK 500 SER A 169 -147.21 -123.15 REMARK 500 LEU A 179 171.43 71.84 REMARK 500 ASP A 219 39.43 -74.18 REMARK 500 ILE A 230 -52.04 -124.74 REMARK 500 ASN A 270 102.89 -17.44 REMARK 500 ALA B 65 -172.51 175.30 REMARK 500 SER B 169 -144.67 -120.91 REMARK 500 LEU B 179 174.22 66.81 REMARK 500 ASP B 219 41.31 -74.76 REMARK 500 ILE B 230 -58.16 -121.35 REMARK 500 ASN B 270 108.00 -24.84 REMARK 500 TYR B 296 -140.31 -155.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 2300 DBREF 1XSE A 24 297 UNP Q6QLL4 DHI1_CAVPO 24 297 DBREF 1XSE B 24 297 UNP Q6QLL4 DHI1_CAVPO 24 297 SEQADV 1XSE MET A 3 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE GLY A 4 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER A 5 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER A 6 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS A 7 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS A 8 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS A 9 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS A 10 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS A 11 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS A 12 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER A 13 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER A 14 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE GLY A 15 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE LEU A 16 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE VAL A 17 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE PRO A 18 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE ARG A 19 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE GLY A 20 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER A 21 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS A 22 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE MET A 23 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE MET B 3 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE GLY B 4 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER B 5 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER B 6 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS B 7 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS B 8 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS B 9 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS B 10 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS B 11 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS B 12 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER B 13 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER B 14 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE GLY B 15 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE LEU B 16 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE VAL B 17 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE PRO B 18 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE ARG B 19 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE GLY B 20 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE SER B 21 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE HIS B 22 UNP Q6QLL4 CLONING ARTIFACT SEQADV 1XSE MET B 23 UNP Q6QLL4 CLONING ARTIFACT SEQRES 1 A 295 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 295 LEU VAL PRO ARG GLY SER HIS MET ASN GLU LYS PHE ARG SEQRES 3 A 295 PRO GLU MET LEU GLN GLY LYS LYS VAL ILE VAL THR GLY SEQRES 4 A 295 ALA SER LYS GLY ILE GLY ARG GLU ILE ALA TYR HIS LEU SEQRES 5 A 295 ALA LYS MET GLY ALA HIS VAL VAL VAL THR ALA ARG SER SEQRES 6 A 295 LYS GLU ALA LEU GLN LYS VAL VAL ALA ARG CYS LEU GLU SEQRES 7 A 295 LEU GLY ALA ALA SER ALA HIS TYR ILE ALA GLY SER MET SEQRES 8 A 295 GLU ASP MET THR PHE ALA GLU GLU PHE VAL ALA GLU ALA SEQRES 9 A 295 GLY ASN LEU MET GLY GLY LEU ASP MET LEU ILE LEU ASN SEQRES 10 A 295 HIS VAL LEU TYR ASN ARG LEU THR PHE PHE HIS GLY GLU SEQRES 11 A 295 ILE ASP ASN VAL ARG LYS SER MET GLU VAL ASN PHE HIS SEQRES 12 A 295 SER PHE VAL VAL LEU SER VAL ALA ALA MET PRO MET LEU SEQRES 13 A 295 MET GLN SER GLN GLY SER ILE ALA VAL VAL SER SER VAL SEQRES 14 A 295 ALA GLY LYS ILE THR TYR PRO LEU ILE ALA PRO TYR SER SEQRES 15 A 295 ALA SER LYS PHE ALA LEU ASP GLY PHE PHE SER THR LEU SEQRES 16 A 295 ARG SER GLU PHE LEU VAL ASN LYS VAL ASN VAL SER ILE SEQRES 17 A 295 THR LEU CYS ILE LEU GLY LEU ILE ASP THR GLU THR ALA SEQRES 18 A 295 ILE LYS ALA THR SER GLY ILE TYR LEU GLY PRO ALA SER SEQRES 19 A 295 PRO LYS GLU GLU CYS ALA LEU GLU ILE ILE LYS GLY THR SEQRES 20 A 295 ALA LEU ARG GLN ASP GLU MET TYR TYR VAL GLY SER ARG SEQRES 21 A 295 TRP VAL PRO TYR LEU LEU GLY ASN PRO GLY ARG LYS ILE SEQRES 22 A 295 MET GLU PHE LEU SER ALA ALA GLU TYR ASN TRP ASP ASN SEQRES 23 A 295 VAL LEU SER ASN GLU LYS LEU TYR GLY SEQRES 1 B 295 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 295 LEU VAL PRO ARG GLY SER HIS MET ASN GLU LYS PHE ARG SEQRES 3 B 295 PRO GLU MET LEU GLN GLY LYS LYS VAL ILE VAL THR GLY SEQRES 4 B 295 ALA SER LYS GLY ILE GLY ARG GLU ILE ALA TYR HIS LEU SEQRES 5 B 295 ALA LYS MET GLY ALA HIS VAL VAL VAL THR ALA ARG SER SEQRES 6 B 295 LYS GLU ALA LEU GLN LYS VAL VAL ALA ARG CYS LEU GLU SEQRES 7 B 295 LEU GLY ALA ALA SER ALA HIS TYR ILE ALA GLY SER MET SEQRES 8 B 295 GLU ASP MET THR PHE ALA GLU GLU PHE VAL ALA GLU ALA SEQRES 9 B 295 GLY ASN LEU MET GLY GLY LEU ASP MET LEU ILE LEU ASN SEQRES 10 B 295 HIS VAL LEU TYR ASN ARG LEU THR PHE PHE HIS GLY GLU SEQRES 11 B 295 ILE ASP ASN VAL ARG LYS SER MET GLU VAL ASN PHE HIS SEQRES 12 B 295 SER PHE VAL VAL LEU SER VAL ALA ALA MET PRO MET LEU SEQRES 13 B 295 MET GLN SER GLN GLY SER ILE ALA VAL VAL SER SER VAL SEQRES 14 B 295 ALA GLY LYS ILE THR TYR PRO LEU ILE ALA PRO TYR SER SEQRES 15 B 295 ALA SER LYS PHE ALA LEU ASP GLY PHE PHE SER THR LEU SEQRES 16 B 295 ARG SER GLU PHE LEU VAL ASN LYS VAL ASN VAL SER ILE SEQRES 17 B 295 THR LEU CYS ILE LEU GLY LEU ILE ASP THR GLU THR ALA SEQRES 18 B 295 ILE LYS ALA THR SER GLY ILE TYR LEU GLY PRO ALA SER SEQRES 19 B 295 PRO LYS GLU GLU CYS ALA LEU GLU ILE ILE LYS GLY THR SEQRES 20 B 295 ALA LEU ARG GLN ASP GLU MET TYR TYR VAL GLY SER ARG SEQRES 21 B 295 TRP VAL PRO TYR LEU LEU GLY ASN PRO GLY ARG LYS ILE SEQRES 22 B 295 MET GLU PHE LEU SER ALA ALA GLU TYR ASN TRP ASP ASN SEQRES 23 B 295 VAL LEU SER ASN GLU LYS LEU TYR GLY HET NDP A1300 48 HET NDP B2300 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 5 HOH *349(H2 O) HELIX 1 1 ARG A 28 GLN A 33 5 6 HELIX 2 2 LYS A 44 MET A 57 1 14 HELIX 3 3 SER A 67 GLY A 82 1 16 HELIX 4 4 ASP A 95 GLY A 111 1 17 HELIX 5 5 GLU A 132 PHE A 144 1 13 HELIX 6 6 PHE A 144 GLN A 162 1 19 HELIX 7 7 SER A 170 LYS A 174 5 5 HELIX 8 8 ILE A 180 ASN A 204 1 25 HELIX 9 9 THR A 220 SER A 228 1 9 HELIX 10 10 PRO A 237 LEU A 251 1 15 HELIX 11 11 TRP A 263 GLY A 269 1 7 HELIX 12 12 ASN A 270 ALA A 282 1 13 HELIX 13 13 ASN A 285 TYR A 296 1 12 HELIX 14 14 ARG B 28 GLN B 33 5 6 HELIX 15 15 LYS B 44 MET B 57 1 14 HELIX 16 16 SER B 67 GLY B 82 1 16 HELIX 17 17 ASP B 95 GLY B 111 1 17 HELIX 18 18 GLU B 132 PHE B 144 1 13 HELIX 19 19 PHE B 144 SER B 161 1 18 HELIX 20 20 SER B 170 LYS B 174 5 5 HELIX 21 21 ILE B 180 ASN B 204 1 25 HELIX 22 22 THR B 220 SER B 228 1 9 HELIX 23 23 PRO B 237 LEU B 251 1 15 HELIX 24 24 TRP B 263 GLY B 269 1 7 HELIX 25 25 ASN B 270 ALA B 282 1 13 HELIX 26 26 ASN B 285 TYR B 296 1 12 SHEET 1 A 7 SER A 85 ALA A 90 0 SHEET 2 A 7 HIS A 60 ALA A 65 1 N VAL A 63 O HIS A 87 SHEET 3 A 7 LYS A 36 VAL A 39 1 N VAL A 37 O HIS A 60 SHEET 4 A 7 MET A 115 LEU A 118 1 O ILE A 117 N ILE A 38 SHEET 5 A 7 SER A 164 VAL A 168 1 O ALA A 166 N LEU A 118 SHEET 6 A 7 SER A 209 LEU A 215 1 O THR A 211 N ILE A 165 SHEET 7 A 7 GLU A 255 TYR A 258 1 O MET A 256 N ILE A 214 SHEET 1 B 7 SER B 85 ALA B 90 0 SHEET 2 B 7 HIS B 60 ALA B 65 1 N VAL B 63 O HIS B 87 SHEET 3 B 7 LYS B 36 VAL B 39 1 N VAL B 37 O HIS B 60 SHEET 4 B 7 MET B 115 LEU B 118 1 O MET B 115 N ILE B 38 SHEET 5 B 7 SER B 164 VAL B 168 1 O ALA B 166 N LEU B 118 SHEET 6 B 7 SER B 209 LEU B 215 1 O THR B 211 N VAL B 167 SHEET 7 B 7 GLU B 255 TYR B 258 1 O MET B 256 N ILE B 214 CISPEP 1 ASN A 204 LYS A 205 0 -25.86 CISPEP 2 ASN B 204 LYS B 205 0 -26.29 SITE 1 AC1 35 GLY A 41 ALA A 42 SER A 43 GLY A 45 SITE 2 AC1 35 ILE A 46 ALA A 65 ARG A 66 SER A 67 SITE 3 AC1 35 ARG A 77 GLY A 91 MET A 93 ASN A 119 SITE 4 AC1 35 HIS A 120 VAL A 121 TYR A 123 VAL A 142 SITE 5 AC1 35 VAL A 168 SER A 169 SER A 170 TYR A 183 SITE 6 AC1 35 LYS A 187 LEU A 215 GLY A 216 LEU A 217 SITE 7 AC1 35 ILE A 218 THR A 220 THR A 222 ALA A 223 SITE 8 AC1 35 HOH A1301 HOH A1305 HOH A1311 HOH A1350 SITE 9 AC1 35 HOH A1353 HOH A1476 HOH A1492 SITE 1 AC2 30 GLY B 41 ALA B 42 SER B 43 GLY B 45 SITE 2 AC2 30 ILE B 46 ALA B 65 ARG B 66 SER B 67 SITE 3 AC2 30 GLY B 91 SER B 92 MET B 93 ASN B 119 SITE 4 AC2 30 HIS B 120 VAL B 121 TYR B 123 VAL B 168 SITE 5 AC2 30 SER B 169 SER B 170 TYR B 183 LYS B 187 SITE 6 AC2 30 LEU B 215 GLY B 216 LEU B 217 ILE B 218 SITE 7 AC2 30 THR B 220 THR B 222 ALA B 223 HOH B2302 SITE 8 AC2 30 HOH B2324 HOH B2350 CRYST1 118.385 118.385 184.772 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008447 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008447 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005412 0.00000