PDB Short entry for 1Y4H HEADER HYDROLASE/HYDROLASE INHIBITOR 30-NOV-04 1Y4H TITLE WILD TYPE STAPHOPAIN-STAPHOSTATIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 220-393; COMPND 5 SYNONYM: STAPHOPAIN B; COMPND 6 EC: 3.4.22.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: CYSTEINE PROTEASE INHIBITOR; COMPND 10 CHAIN: C, D; COMPND 11 SYNONYM: STAPHOSTATIN B; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: SSPB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETDUET; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 12 ORGANISM_TAXID: 1280; SOURCE 13 GENE: SSPC; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PETDUET KEYWDS CYSTEINE PROTEASE, INHIBITOR, STAPHOPAIN B, STAPHOSTATIN B, KEYWDS 2 HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.FILIPEK,J.POTEMPA,M.BOCHTLER REVDAT 6 23-AUG-23 1Y4H 1 REMARK SEQADV REVDAT 5 24-JAN-18 1Y4H 1 JRNL REVDAT 4 13-JUL-11 1Y4H 1 VERSN REVDAT 3 24-FEB-09 1Y4H 1 VERSN REVDAT 2 19-APR-05 1Y4H 1 JRNL REVDAT 1 18-JAN-05 1Y4H 0 JRNL AUTH R.FILIPEK,J.POTEMPA,M.BOCHTLER JRNL TITL A COMPARISON OF STAPHOSTATIN B WITH STANDARD MECHANISM JRNL TITL 2 SERINE PROTEASE INHIBITORS. JRNL REF J.BIOL.CHEM. V. 280 14669 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15644332 JRNL DOI 10.1074/JBC.M411792200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.FILIPEK,M.RZYCHON,A.OLEKSY,M.GRUCA,A.DUBIN,J.POTEMPA, REMARK 1 AUTH 2 M.BOCHTLER REMARK 1 TITL THE STAPHOSTATIN-STAPHOPAIN COMPLEX: A FORWARD BINDING REMARK 1 TITL 2 INHIBITOR IN COMPLEX WITH ITS TARGET CYSTEINE PROTEASE. REMARK 1 REF J.BIOL.CHEM. V. 278 40959 2003 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.RZYCHON,R.FILIPEK,A.SABAT,K.KOSOWSKA,A.DUBIN,J.POTEMPA, REMARK 1 AUTH 2 M.BOCHTLER REMARK 1 TITL STAPHOSTATINS RESEMBLE LIPOCALINS, NOT CYSTATINS IN FOLD. REMARK 1 REF PROTEIN SCI. V. 12 2252 2003 REMARK 1 REFN ISSN 0961-8368 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.RZYCHON,A.SABAT,K.KOSOWSKA,J.POTEMPA,A.DUBIN REMARK 1 TITL STAPHOSTATINS: AN EXPANDING NEW GROUP OF PROTEINASE REMARK 1 TITL 2 INHIBITORS WITH A UNIQUE SPECIFICITY FOR THE REGULATION OF REMARK 1 TITL 3 STAPHOPAINS, STAPHYLOCOCCUS SPP. CYSTEINE PROTEINASES. REMARK 1 REF MOL.MICROBIOL. V. 49 1051 2003 REMARK 1 REFN ISSN 0950-382X REMARK 1 REFERENCE 4 REMARK 1 AUTH R.FILIPEK,R.SZCZEPANOWSKI,A.SABAT,J.POTEMPA,M.BOCHTLER REMARK 1 TITL PROSTAPHOPAIN B STRUCTURE: A COMPARISON OF REMARK 1 TITL 2 PROREGION-MEDIATED AND STAPHOSTATIN-MEDIATED PROTEASE REMARK 1 TITL 3 INHIBITION. REMARK 1 REF BIOCHEMISTRY V. 43 14306 2004 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 50784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2716 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3740 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4614 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 170 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 34.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.76000 REMARK 3 B22 (A**2) : 0.20000 REMARK 3 B33 (A**2) : -0.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.095 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.608 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4742 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6446 ; 1.509 ; 1.926 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 560 ; 5.666 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 264 ;40.651 ;25.530 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 792 ;12.880 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;22.754 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 690 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3688 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1851 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3172 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 248 ; 0.114 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.284 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.262 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2906 ; 1.605 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4558 ; 1.838 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2133 ; 3.136 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1888 ; 4.568 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 221 A 393 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9780 6.1550 9.3940 REMARK 3 T TENSOR REMARK 3 T11: -0.0059 T22: 0.0749 REMARK 3 T33: -0.1513 T12: -0.0301 REMARK 3 T13: -0.0147 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.8215 L22: 1.6731 REMARK 3 L33: 2.3747 L12: 0.0261 REMARK 3 L13: 0.1917 L23: 0.0218 REMARK 3 S TENSOR REMARK 3 S11: -0.0778 S12: 0.1797 S13: 0.0081 REMARK 3 S21: -0.3556 S22: 0.0797 S23: 0.1153 REMARK 3 S31: -0.0833 S32: -0.1799 S33: -0.0019 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 221 B 393 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8100 34.9200 23.0640 REMARK 3 T TENSOR REMARK 3 T11: -0.0211 T22: -0.0158 REMARK 3 T33: -0.0933 T12: 0.0847 REMARK 3 T13: 0.0373 T23: 0.0296 REMARK 3 L TENSOR REMARK 3 L11: 0.8861 L22: 1.4996 REMARK 3 L33: 4.2049 L12: 0.0986 REMARK 3 L13: 0.1791 L23: -0.7398 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: 0.0403 S13: 0.0950 REMARK 3 S21: -0.1500 S22: 0.1553 S23: -0.0202 REMARK 3 S31: -0.5001 S32: -0.4095 S33: -0.1307 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 109 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7520 -10.8650 30.4000 REMARK 3 T TENSOR REMARK 3 T11: -0.0859 T22: 0.0626 REMARK 3 T33: -0.1111 T12: 0.0194 REMARK 3 T13: 0.0202 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 1.2027 L22: 1.9436 REMARK 3 L33: 2.2526 L12: 0.6737 REMARK 3 L13: -1.0706 L23: -0.8283 REMARK 3 S TENSOR REMARK 3 S11: 0.0077 S12: -0.1090 S13: -0.1270 REMARK 3 S21: -0.1042 S22: -0.1144 S23: -0.0547 REMARK 3 S31: 0.1057 S32: 0.3230 S33: 0.1067 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 109 REMARK 3 ORIGIN FOR THE GROUP (A): 45.0950 20.2580 40.9120 REMARK 3 T TENSOR REMARK 3 T11: -0.0981 T22: 0.0414 REMARK 3 T33: -0.0567 T12: 0.0543 REMARK 3 T13: -0.0270 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 4.3416 L22: 1.5743 REMARK 3 L33: 2.6031 L12: 0.4826 REMARK 3 L13: -0.3981 L23: -0.2811 REMARK 3 S TENSOR REMARK 3 S11: 0.1579 S12: -0.3104 S13: -0.2349 REMARK 3 S21: 0.0712 S22: -0.0706 S23: -0.1489 REMARK 3 S31: 0.2070 S32: 0.3711 S33: -0.0873 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Y4H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000031104. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MONOCHROMATIC REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53525 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : 0.04700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 30.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : 0.32000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1PXV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M (NH4)2SO4, 9% ISOPROPANOL , PH 6.4, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.76000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -105.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 89.52237 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -38.76000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 80.69023 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 206 REMARK 465 GLY A 207 REMARK 465 SER A 208 REMARK 465 SER A 209 REMARK 465 HIS A 210 REMARK 465 HIS A 211 REMARK 465 HIS A 212 REMARK 465 HIS A 213 REMARK 465 HIS A 214 REMARK 465 HIS A 215 REMARK 465 SER A 216 REMARK 465 GLN A 217 REMARK 465 ASP A 218 REMARK 465 PRO A 219 REMARK 465 ASP A 220 REMARK 465 MET B 206 REMARK 465 GLY B 207 REMARK 465 SER B 208 REMARK 465 SER B 209 REMARK 465 HIS B 210 REMARK 465 HIS B 211 REMARK 465 HIS B 212 REMARK 465 HIS B 213 REMARK 465 HIS B 214 REMARK 465 HIS B 215 REMARK 465 SER B 216 REMARK 465 GLN B 217 REMARK 465 ASP B 218 REMARK 465 PRO B 219 REMARK 465 ASP B 220 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 238 -115.87 -116.70 REMARK 500 ASP A 352 0.36 85.21 REMARK 500 PHE B 238 -107.93 -113.71 REMARK 500 ALA B 283 -169.91 -109.26 REMARK 500 ASN D 72 65.27 -100.98 REMARK 500 ASP D 82 -72.20 -104.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D 451 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 452 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 453 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 460 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 461 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 462 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 463 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 464 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PXV RELATED DB: PDB REMARK 900 RELATED ID: 1NYC RELATED DB: PDB REMARK 900 RELATED ID: 1X9Y RELATED DB: PDB REMARK 900 RELATED ID: 1CV8 RELATED DB: PDB DBREF 1Y4H A 220 393 UNP Q70UQ8 SSPB_STAAU 220 393 DBREF 1Y4H B 220 393 UNP Q70UQ8 SSPB_STAAU 220 393 DBREF 1Y4H C 1 109 UNP Q9EYW6 SSPC_STAAU 1 109 DBREF 1Y4H D 1 109 UNP Q9EYW6 SSPC_STAAU 1 109 SEQADV 1Y4H MET A 206 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H GLY A 207 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H SER A 208 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H SER A 209 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS A 210 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS A 211 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS A 212 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS A 213 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS A 214 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS A 215 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H SER A 216 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H GLN A 217 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H ASP A 218 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H PRO A 219 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H MET B 206 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H GLY B 207 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H SER B 208 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H SER B 209 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS B 210 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS B 211 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS B 212 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS B 213 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS B 214 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H HIS B 215 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H SER B 216 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H GLN B 217 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H ASP B 218 UNP Q70UQ8 CLONING ARTIFACT SEQADV 1Y4H PRO B 219 UNP Q70UQ8 CLONING ARTIFACT SEQRES 1 A 188 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 188 PRO ASP GLN VAL GLN TYR GLU ASN THR LEU LYS ASN PHE SEQRES 3 A 188 LYS ILE ARG GLU GLN GLN PHE ASP ASN SER TRP CYS ALA SEQRES 4 A 188 GLY PHE SER MET ALA ALA LEU LEU ASN ALA THR LYS ASN SEQRES 5 A 188 THR ASP THR TYR ASN ALA HIS ASP ILE MET ARG THR LEU SEQRES 6 A 188 TYR PRO GLU VAL SER GLU GLN ASP LEU PRO ASN CYS ALA SEQRES 7 A 188 THR PHE PRO ASN GLN MET ILE GLU TYR GLY LYS SER GLN SEQRES 8 A 188 GLY ARG ASP ILE HIS TYR GLN GLU GLY VAL PRO SER TYR SEQRES 9 A 188 ASN GLN VAL ASP GLN LEU THR LYS ASP ASN VAL GLY ILE SEQRES 10 A 188 MET ILE LEU ALA GLN SER VAL SER GLN ASN PRO ASN ASP SEQRES 11 A 188 PRO HIS LEU GLY HIS ALA LEU ALA VAL VAL GLY ASN ALA SEQRES 12 A 188 LYS ILE ASN ASP GLN GLU LYS LEU ILE TYR TRP ASN PRO SEQRES 13 A 188 TRP ASP THR GLU LEU SER ILE GLN ASP ALA ASP SER SER SEQRES 14 A 188 LEU LEU HIS LEU SER PHE ASN ARG ASP TYR ASN TRP TYR SEQRES 15 A 188 GLY SER MET ILE GLY TYR SEQRES 1 B 188 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 B 188 PRO ASP GLN VAL GLN TYR GLU ASN THR LEU LYS ASN PHE SEQRES 3 B 188 LYS ILE ARG GLU GLN GLN PHE ASP ASN SER TRP CYS ALA SEQRES 4 B 188 GLY PHE SER MET ALA ALA LEU LEU ASN ALA THR LYS ASN SEQRES 5 B 188 THR ASP THR TYR ASN ALA HIS ASP ILE MET ARG THR LEU SEQRES 6 B 188 TYR PRO GLU VAL SER GLU GLN ASP LEU PRO ASN CYS ALA SEQRES 7 B 188 THR PHE PRO ASN GLN MET ILE GLU TYR GLY LYS SER GLN SEQRES 8 B 188 GLY ARG ASP ILE HIS TYR GLN GLU GLY VAL PRO SER TYR SEQRES 9 B 188 ASN GLN VAL ASP GLN LEU THR LYS ASP ASN VAL GLY ILE SEQRES 10 B 188 MET ILE LEU ALA GLN SER VAL SER GLN ASN PRO ASN ASP SEQRES 11 B 188 PRO HIS LEU GLY HIS ALA LEU ALA VAL VAL GLY ASN ALA SEQRES 12 B 188 LYS ILE ASN ASP GLN GLU LYS LEU ILE TYR TRP ASN PRO SEQRES 13 B 188 TRP ASP THR GLU LEU SER ILE GLN ASP ALA ASP SER SER SEQRES 14 B 188 LEU LEU HIS LEU SER PHE ASN ARG ASP TYR ASN TRP TYR SEQRES 15 B 188 GLY SER MET ILE GLY TYR SEQRES 1 C 109 MET TYR GLN LEU GLN PHE ILE ASN LEU VAL TYR ASP THR SEQRES 2 C 109 THR LYS LEU THR HIS LEU GLU GLN THR ASN ILE ASN LEU SEQRES 3 C 109 PHE ILE GLY ASN TRP SER ASN HIS GLN LEU GLN LYS SER SEQRES 4 C 109 ILE CYS ILE ARG HIS GLY ASP ASP THR SER HIS ASN GLN SEQRES 5 C 109 TYR HIS ILE LEU PHE ILE ASP THR ALA HIS GLN ARG ILE SEQRES 6 C 109 LYS PHE SER SER PHE ASP ASN GLU GLU ILE ILE TYR ILE SEQRES 7 C 109 LEU ASP TYR ASP ASP THR GLN HIS ILE LEU MET GLN THR SEQRES 8 C 109 SER SER LYS GLN GLY ILE GLY THR SER ARG PRO ILE VAL SEQRES 9 C 109 TYR GLU ARG LEU VAL SEQRES 1 D 109 MET TYR GLN LEU GLN PHE ILE ASN LEU VAL TYR ASP THR SEQRES 2 D 109 THR LYS LEU THR HIS LEU GLU GLN THR ASN ILE ASN LEU SEQRES 3 D 109 PHE ILE GLY ASN TRP SER ASN HIS GLN LEU GLN LYS SER SEQRES 4 D 109 ILE CYS ILE ARG HIS GLY ASP ASP THR SER HIS ASN GLN SEQRES 5 D 109 TYR HIS ILE LEU PHE ILE ASP THR ALA HIS GLN ARG ILE SEQRES 6 D 109 LYS PHE SER SER PHE ASP ASN GLU GLU ILE ILE TYR ILE SEQRES 7 D 109 LEU ASP TYR ASP ASP THR GLN HIS ILE LEU MET GLN THR SEQRES 8 D 109 SER SER LYS GLN GLY ILE GLY THR SER ARG PRO ILE VAL SEQRES 9 D 109 TYR GLU ARG LEU VAL HET CL A 453 1 HET SO4 A 461 5 HET SO4 A 463 5 HET SO4 B 460 5 HET CL C 450 1 HET CL C 452 1 HET SO4 C 462 5 HET SO4 C 464 5 HET CL D 451 1 HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 5 CL 4(CL 1-) FORMUL 6 SO4 5(O4 S 2-) FORMUL 14 HOH *170(H2 O) HELIX 1 1 TRP A 242 ASN A 257 1 16 HELIX 2 2 ASN A 262 TYR A 271 1 10 HELIX 3 3 ASP A 278 CYS A 282 5 5 HELIX 4 4 PHE A 285 GLN A 296 1 12 HELIX 5 5 SER A 308 ASP A 318 1 11 HELIX 6 6 TRP B 242 ASN B 257 1 16 HELIX 7 7 ASN B 262 TYR B 271 1 10 HELIX 8 8 ASP B 278 CYS B 282 5 5 HELIX 9 9 PHE B 285 GLN B 296 1 12 HELIX 10 10 SER B 308 ASP B 318 1 11 HELIX 11 11 ASP C 12 LEU C 16 5 5 HELIX 12 12 THR C 17 LEU C 26 1 10 HELIX 13 13 ASP D 12 LEU D 16 5 5 HELIX 14 14 THR D 17 LEU D 26 1 10 SHEET 1 A 6 VAL A 222 THR A 227 0 SHEET 2 A 6 GLY A 339 ILE A 350 -1 O ASN A 347 N ASN A 226 SHEET 3 A 6 ILE A 322 SER A 328 -1 N ILE A 322 O VAL A 344 SHEET 4 A 6 ARG A 382 ILE A 391 -1 O ASN A 385 N GLN A 327 SHEET 5 A 6 GLN A 353 TRP A 359 0 SHEET 6 A 6 SER A 367 ASP A 370 -1 O GLN A 369 N LEU A 356 SHEET 1 B 5 HIS A 301 GLU A 304 0 SHEET 2 B 5 ARG A 382 ILE A 391 -1 O SER A 389 N GLN A 303 SHEET 3 B 5 ILE A 322 SER A 328 -1 N GLN A 327 O ASN A 385 SHEET 4 B 5 GLY A 339 ILE A 350 -1 O VAL A 344 N ILE A 322 SHEET 5 B 5 LEU A 375 LEU A 378 0 SHEET 1 C 6 VAL B 222 THR B 227 0 SHEET 2 C 6 GLY B 339 ILE B 350 -1 O ASN B 347 N ASN B 226 SHEET 3 C 6 ILE B 322 GLN B 327 -1 N ILE B 322 O VAL B 344 SHEET 4 C 6 ARG B 382 ILE B 391 -1 O ASN B 385 N GLN B 327 SHEET 5 C 6 GLN B 353 TRP B 359 0 SHEET 6 C 6 SER B 367 ASP B 370 -1 O GLN B 369 N LEU B 356 SHEET 1 D 5 HIS B 301 GLU B 304 0 SHEET 2 D 5 ARG B 382 ILE B 391 -1 O ILE B 391 N HIS B 301 SHEET 3 D 5 ILE B 322 GLN B 327 -1 N GLN B 327 O ASN B 385 SHEET 4 D 5 GLY B 339 ILE B 350 -1 O VAL B 344 N ILE B 322 SHEET 5 D 5 LEU B 375 LEU B 378 0 SHEET 1 E 9 GLN C 3 VAL C 10 0 SHEET 2 E 9 LYS C 38 HIS C 44 1 O SER C 39 N GLN C 3 SHEET 3 E 9 GLY C 29 ASN C 33 -1 N GLY C 29 O ILE C 42 SHEET 4 E 9 ILE C 103 ARG C 107 -1 O GLU C 106 N SER C 32 SHEET 5 E 9 HIS C 86 SER C 93 -1 N ILE C 87 O TYR C 105 SHEET 6 E 9 ASN C 72 ASP C 83 -1 N ILE C 76 O SER C 92 SHEET 7 E 9 ARG C 64 SER C 69 -1 N PHE C 67 O TYR C 77 SHEET 8 E 9 GLN C 52 ASP C 59 -1 N ASP C 59 O ARG C 64 SHEET 9 E 9 GLN C 3 VAL C 10 1 N VAL C 10 O TYR C 53 SHEET 1 F 9 GLN D 3 VAL D 10 0 SHEET 2 F 9 LYS D 38 HIS D 44 1 O SER D 39 N GLN D 3 SHEET 3 F 9 GLY D 29 ASN D 33 -1 N ASN D 33 O LYS D 38 SHEET 4 F 9 ILE D 103 ARG D 107 -1 O GLU D 106 N SER D 32 SHEET 5 F 9 HIS D 86 SER D 93 -1 N ILE D 87 O TYR D 105 SHEET 6 F 9 ILE D 75 ASP D 83 -1 N ILE D 76 O SER D 92 SHEET 7 F 9 ARG D 64 SER D 69 -1 N PHE D 67 O TYR D 77 SHEET 8 F 9 GLN D 52 ASP D 59 -1 N ASP D 59 O ARG D 64 SHEET 9 F 9 GLN D 3 VAL D 10 1 N VAL D 10 O TYR D 53 SITE 1 AC1 1 HIS C 50 SITE 1 AC2 1 HIS D 50 SITE 1 AC3 2 HIS C 18 HOH C 480 SITE 1 AC4 1 HIS A 337 SITE 1 AC5 3 LYS B 232 ARG B 234 ASP B 259 SITE 1 AC6 2 LYS A 232 ARG A 234 SITE 1 AC7 3 THR C 22 ASN C 25 HOH C 473 SITE 1 AC8 2 LYS A 256 ARG A 298 SITE 1 AC9 1 ARG C 101 CRYST1 57.948 77.520 84.891 90.00 108.10 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017257 0.000000 0.005641 0.00000 SCALE2 0.000000 0.012900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012393 0.00000