PDB Short entry for 1Y8M HEADER UNKNOWN FUNCTION 13-DEC-04 1Y8M TITLE SOLUTION STRUCTURE OF YEAST MITOCHONDRIA FISSION PROTEIN FIS1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIS1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS MITOCHONDRIA, FISSION, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.SUZUKI,R.J.YOULE,N.TJANDRA REVDAT 4 02-MAR-22 1Y8M 1 REMARK SEQADV REVDAT 3 24-FEB-09 1Y8M 1 VERSN REVDAT 2 21-JUN-05 1Y8M 1 JRNL REVDAT 1 05-APR-05 1Y8M 0 JRNL AUTH M.SUZUKI,A.NEUTZNER,N.TJANDRA,R.J.YOULE JRNL TITL NOVEL STRUCTURE OF THE N TERMINUS IN YEAST FIS1 CORRELATES JRNL TITL 2 WITH A SPECIALIZED FUNCTION IN MITOCHONDRIAL FISSION. JRNL REF J.BIOL.CHEM. V. 280 21444 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15809300 JRNL DOI 10.1074/JBC.M414092200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.1, XPLOR-NIH 3.8.5 REMARK 3 AUTHORS : C.D.SCHWIETERS,J.J.KUSZEWSKI,N.TJANDRA,G.M.CLORE REMARK 3 (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Y8M COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-DEC-04. REMARK 100 THE DEPOSITION ID IS D_1000031253. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 305 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 10 MM TRIS ACETATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM PROTEIN U-15N; 1MM PROTEIN U REMARK 210 -15N, 13C; 1MM PROTEIN U-15N, 13C REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; REMARK 210 4D_13C/15N-SEPARATED_NOESY; 4D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.3, PIPP 4.2.8, XPLOR REMARK 210 -NIH 3.8.5 REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING, MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 73 H ARG A 75 1.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 4 -31.86 -136.29 REMARK 500 1 PRO A 8 -174.44 -58.53 REMARK 500 1 SER A 74 -44.67 65.66 REMARK 500 1 ARG A 75 25.73 -74.34 REMARK 500 1 GLU A 92 44.10 -82.77 REMARK 500 1 TYR A 93 -14.86 -45.24 REMARK 500 1 HIS A 106 -21.93 -35.46 REMARK 500 1 GLU A 107 32.14 75.25 REMARK 500 1 ASN A 109 -112.69 -66.50 REMARK 500 1 ASN A 110 75.72 53.53 REMARK 500 1 LYS A 111 -10.79 -49.61 REMARK 500 1 THR A 128 -124.46 89.29 REMARK 500 1 LEU A 129 -77.14 -137.56 REMARK 500 1 VAL A 133 28.17 -79.72 REMARK 500 1 VAL A 134 110.52 57.11 REMARK 500 1 ALA A 135 107.60 -59.56 REMARK 500 1 HIS A 143 -19.77 -165.50 REMARK 500 2 LYS A 3 -25.83 -162.69 REMARK 500 2 VAL A 4 -139.68 -64.69 REMARK 500 2 ASP A 5 -147.52 -61.90 REMARK 500 2 PHE A 6 28.36 -154.75 REMARK 500 2 PRO A 8 -174.17 -59.98 REMARK 500 2 TYR A 14 23.70 -75.96 REMARK 500 2 PRO A 16 175.11 -59.65 REMARK 500 2 GLU A 71 39.49 -99.61 REMARK 500 2 ALA A 72 86.55 -171.94 REMARK 500 2 GLU A 73 60.79 -63.54 REMARK 500 2 SER A 74 -74.05 -177.66 REMARK 500 2 ARG A 75 -9.15 -46.62 REMARK 500 2 GLU A 92 45.15 -81.98 REMARK 500 2 TYR A 93 -14.73 -46.92 REMARK 500 2 HIS A 106 -136.34 -118.28 REMARK 500 2 GLU A 107 -176.45 77.67 REMARK 500 2 ARG A 108 -127.56 -97.31 REMARK 500 2 THR A 128 12.05 -69.88 REMARK 500 2 LEU A 129 -170.53 52.18 REMARK 500 2 LYS A 130 174.74 -55.48 REMARK 500 2 ALA A 135 88.66 -64.17 REMARK 500 2 VAL A 138 -172.57 -54.93 REMARK 500 2 HIS A 140 -78.74 -74.99 REMARK 500 3 THR A 2 -19.55 -165.73 REMARK 500 3 LYS A 3 -0.14 -163.49 REMARK 500 3 VAL A 4 -49.37 64.02 REMARK 500 3 ASP A 5 111.13 58.58 REMARK 500 3 TRP A 7 146.63 58.55 REMARK 500 3 PRO A 8 175.84 -57.04 REMARK 500 3 GLU A 73 -100.47 -151.73 REMARK 500 3 SER A 74 -33.92 -32.05 REMARK 500 3 ARG A 75 29.05 -78.22 REMARK 500 3 GLU A 92 47.32 -88.58 REMARK 500 REMARK 500 THIS ENTRY HAS 404 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PC2 RELATED DB: PDB REMARK 900 HUMAN FIS1 DBREF 1Y8M A 1 138 UNP P40515 YIG5_YEAST 1 138 SEQADV 1Y8M HIS A 139 UNP P40515 EXPRESSION TAG SEQADV 1Y8M HIS A 140 UNP P40515 EXPRESSION TAG SEQADV 1Y8M HIS A 141 UNP P40515 EXPRESSION TAG SEQADV 1Y8M HIS A 142 UNP P40515 EXPRESSION TAG SEQADV 1Y8M HIS A 143 UNP P40515 EXPRESSION TAG SEQADV 1Y8M HIS A 144 UNP P40515 EXPRESSION TAG SEQRES 1 A 144 MET THR LYS VAL ASP PHE TRP PRO THR LEU LYS ASP ALA SEQRES 2 A 144 TYR GLU PRO LEU TYR PRO GLN GLN LEU GLU ILE LEU ARG SEQRES 3 A 144 GLN GLN VAL VAL SER GLU GLY GLY PRO THR ALA THR ILE SEQRES 4 A 144 GLN SER ARG PHE ASN TYR ALA TRP GLY LEU ILE LYS SER SEQRES 5 A 144 THR ASP VAL ASN ASP GLU ARG LEU GLY VAL LYS ILE LEU SEQRES 6 A 144 THR ASP ILE TYR LYS GLU ALA GLU SER ARG ARG ARG GLU SEQRES 7 A 144 CYS LEU TYR TYR LEU THR ILE GLY CYS TYR LYS LEU GLY SEQRES 8 A 144 GLU TYR SER MET ALA LYS ARG TYR VAL ASP THR LEU PHE SEQRES 9 A 144 GLU HIS GLU ARG ASN ASN LYS GLN VAL GLY ALA LEU LYS SEQRES 10 A 144 SER MET VAL GLU ASP LYS ILE GLN LYS GLU THR LEU LYS SEQRES 11 A 144 GLY VAL VAL VAL ALA GLY GLY VAL HIS HIS HIS HIS HIS SEQRES 12 A 144 HIS HELIX 1 1 PRO A 19 SER A 31 1 13 HELIX 2 2 ILE A 39 LYS A 51 1 13 HELIX 3 3 VAL A 55 LYS A 70 1 16 HELIX 4 4 ARG A 76 LYS A 89 1 14 HELIX 5 5 TYR A 93 GLU A 105 1 13 HELIX 6 6 LYS A 111 GLU A 127 1 17 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000