PDB Short entry for 1Z77 HEADER TRANSCRIPTION 24-MAR-05 1Z77 TITLE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR PROTEIN FROM THERMOTOGA TITLE 2 MARITIMA. COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR (TETR FAMILY); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: B834(DE3)PLYSS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS TRANSCRIPTIONAL REGULATOR, TETR FAMILY, STRUCTURAL GENOMICS, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR K.D.KOCLEGA,M.CHRUSZCZ,M.D.ZIMMERMAN,M.CYMBOROWSKI,M.KUDRITSKA, AUTHOR 2 W.MINOR,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 8 13-APR-22 1Z77 1 AUTHOR JRNL REMARK SEQADV REVDAT 8 2 1 LINK REVDAT 7 07-NOV-18 1Z77 1 REMARK REVDAT 6 11-OCT-17 1Z77 1 REMARK REVDAT 5 24-FEB-09 1Z77 1 VERSN REVDAT 4 16-OCT-07 1Z77 1 JRNL REVDAT 3 21-NOV-06 1Z77 1 AUTHOR REVDAT 2 02-MAY-06 1Z77 1 JRNL REVDAT 1 10-MAY-05 1Z77 0 JRNL AUTH K.D.KOCLEGA,M.CHRUSZCZ,M.D.ZIMMERMAN,M.CYMBOROWSKI, JRNL AUTH 2 E.EVDOKIMOVA,W.MINOR JRNL TITL CRYSTAL STRUCTURE OF A TRANSCRIPTIONAL REGULATOR TM1030 FROM JRNL TITL 2 THERMOTOGA MARITIMA SOLVED BY AN UNUSUAL MAD EXPERIMENT. JRNL REF J.STRUCT.BIOL. V. 159 424 2007 JRNL REFN ISSN 1047-8477 JRNL PMID 17588774 JRNL DOI 10.1016/J.JSB.2007.04.012 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 13472 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 715 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 996 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1596 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 36 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.29000 REMARK 3 B22 (A**2) : 1.53000 REMARK 3 B33 (A**2) : 0.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.190 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1632 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2192 ; 1.667 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 199 ; 5.153 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;33.921 ;24.533 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 298 ;13.892 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.246 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 244 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1204 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 786 ; 0.219 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1179 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 65 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.194 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.176 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1045 ; 1.454 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1584 ; 1.888 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 703 ; 3.631 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 608 ; 4.916 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Z77 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032384. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-05; 10-FEB-05 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 19-ID; 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91932; 0.97932 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL; SI 111 CHANNEL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15569 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.8400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.53900 REMARK 200 R SYM FOR SHELL (I) : 0.47100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD/SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXD, MLPHARE, DM, SOLVE, RESOLVE, CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M NA CITRATE, 30% W/V PEG 2K MME, REMARK 280 0.1M KSCN, PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 28.02150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.84200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.02150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.84200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). THE BIOLOGICAL MOLECULE REMARK 300 IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 65.68400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CE NZ REMARK 470 LYS A 18 CG CD CE NZ REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 LYS A 32 CE NZ REMARK 470 LYS A 45 CE NZ REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 LYS A 61 CD CE NZ REMARK 470 LYS A 64 CE NZ REMARK 470 ARG A 74 NE CZ NH1 NH2 REMARK 470 ARG A 84 CD NE CZ NH1 NH2 REMARK 470 LYS A 89 CD CE NZ REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 ILE A 104 CD1 REMARK 470 GLU A 111 CB CG CD OE1 OE2 REMARK 470 LYS A 115 CE NZ REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 ARG A 133 NE CZ NH1 NH2 REMARK 470 LYS A 137 NZ REMARK 470 GLU A 143 CB CG CD OE1 OE2 REMARK 470 ILE A 149 CD1 REMARK 470 LYS A 172 CD CE NZ REMARK 470 ARG A 178 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 200 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 180 CG - SE - CE ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 45 -63.86 82.87 REMARK 500 SER A 108 -28.11 -171.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC4542 RELATED DB: TARGETDB DBREF 1Z77 A 1 200 UNP Q9X0C0 Q9X0C0_THEMA 1 200 SEQADV 1Z77 MSE A 1 UNP Q9X0C0 MET 1 MODIFIED RESIDUE SEQADV 1Z77 MSE A 56 UNP Q9X0C0 MET 56 MODIFIED RESIDUE SEQADV 1Z77 MSE A 71 UNP Q9X0C0 MET 71 MODIFIED RESIDUE SEQADV 1Z77 MSE A 82 UNP Q9X0C0 MET 82 MODIFIED RESIDUE SEQADV 1Z77 MSE A 155 UNP Q9X0C0 MET 155 MODIFIED RESIDUE SEQADV 1Z77 MSE A 180 UNP Q9X0C0 MET 180 MODIFIED RESIDUE SEQADV 1Z77 MSE A 190 UNP Q9X0C0 MET 190 MODIFIED RESIDUE SEQADV 1Z77 MSE A 198 UNP Q9X0C0 MET 198 MODIFIED RESIDUE SEQRES 1 A 200 MSE LEU SER LYS ARG ASP ALA ILE LEU LYS ALA ALA VAL SEQRES 2 A 200 GLU VAL PHE GLY LYS LYS GLY TYR ASP ARG ALA THR THR SEQRES 3 A 200 ASP GLU ILE ALA GLU LYS ALA GLY VAL ALA LYS GLY LEU SEQRES 4 A 200 ILE PHE HIS TYR PHE LYS ASN LYS GLU GLU LEU TYR TYR SEQRES 5 A 200 GLN ALA TYR MSE SER VAL THR GLU LYS LEU GLN LYS GLU SEQRES 6 A 200 PHE GLU ASN PHE LEU MSE LYS ASN ARG ASN ARG ASP ILE SEQRES 7 A 200 PHE ASP PHE MSE GLU ARG TRP ILE GLU LYS LYS LEU GLU SEQRES 8 A 200 TYR SER ALA SER HIS PRO GLU GLU ALA ASP PHE LEU ILE SEQRES 9 A 200 THR LEU VAL SER VAL ASP GLU GLY LEU ARG LYS ARG ILE SEQRES 10 A 200 LEU LEU ASP LEU GLU LYS SER GLN ARG VAL PHE PHE ASP SEQRES 11 A 200 PHE VAL ARG GLU LYS LEU LYS ASP LEU ASP LEU ALA GLU SEQRES 12 A 200 ASP VAL THR GLU GLU ILE ALA LEU LYS PHE LEU MSE TRP SEQRES 13 A 200 PHE PHE SER GLY PHE GLU GLU VAL TYR LEU ARG THR TYR SEQRES 14 A 200 GLN GLY LYS PRO GLU LEU LEU LYS ARG ASP MSE ASN THR SEQRES 15 A 200 LEU VAL GLU GLU VAL LYS VAL MSE LEU ARG ILE LEU LYS SEQRES 16 A 200 LYS GLY MSE THR LYS MODRES 1Z77 MSE A 1 MET SELENOMETHIONINE MODRES 1Z77 MSE A 56 MET SELENOMETHIONINE MODRES 1Z77 MSE A 71 MET SELENOMETHIONINE MODRES 1Z77 MSE A 82 MET SELENOMETHIONINE MODRES 1Z77 MSE A 155 MET SELENOMETHIONINE MODRES 1Z77 MSE A 180 MET SELENOMETHIONINE MODRES 1Z77 MSE A 190 MET SELENOMETHIONINE MODRES 1Z77 MSE A 198 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 56 8 HET MSE A 71 8 HET MSE A 82 8 HET MSE A 155 8 HET MSE A 180 8 HET MSE A 190 8 HET MSE A 198 8 HET EDO A2201 4 HET EDO A2202 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 HOH *36(H2 O) HELIX 1 1 SER A 3 GLY A 20 1 18 HELIX 2 2 THR A 25 GLY A 34 1 10 HELIX 3 3 ALA A 36 LYS A 45 1 10 HELIX 4 4 ASN A 46 ARG A 74 1 29 HELIX 5 5 ASP A 77 HIS A 96 1 20 HELIX 6 6 HIS A 96 ILE A 104 1 9 HELIX 7 7 THR A 105 VAL A 107 5 3 HELIX 8 8 ASP A 110 LYS A 137 1 28 HELIX 9 9 THR A 146 TYR A 169 1 24 HELIX 10 10 LYS A 172 THR A 199 1 28 LINK C MSE A 1 N LEU A 2 1555 1555 1.33 LINK C TYR A 55 N MSE A 56 1555 1555 1.36 LINK C MSE A 56 N SER A 57 1555 1555 1.32 LINK C LEU A 70 N MSE A 71 1555 1555 1.34 LINK C MSE A 71 N LYS A 72 1555 1555 1.33 LINK C PHE A 81 N MSE A 82 1555 1555 1.33 LINK C MSE A 82 N GLU A 83 1555 1555 1.34 LINK C LEU A 154 N MSE A 155 1555 1555 1.35 LINK C MSE A 155 N TRP A 156 1555 1555 1.33 LINK C ASP A 179 N MSE A 180 1555 1555 1.33 LINK C MSE A 180 N ASN A 181 1555 1555 1.33 LINK C VAL A 189 N MSE A 190 1555 1555 1.34 LINK C MSE A 190 N LEU A 191 1555 1555 1.34 LINK C GLY A 197 N MSE A 198 1555 1555 1.33 LINK C MSE A 198 N THR A 199 1555 1555 1.33 SITE 1 AC1 5 ALA A 36 LYS A 37 ARG A 76 ASP A 77 SITE 2 AC1 5 ASP A 80 SITE 1 AC2 8 SER A 93 PRO A 97 ALA A 100 TYR A 169 SITE 2 AC2 8 GLY A 171 LYS A 172 PRO A 173 HOH A2204 CRYST1 56.043 65.684 55.694 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017843 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015224 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017955 0.00000 HETATM 1 N MSE A 1 25.087 10.081 46.049 1.00 47.91 N HETATM 2 CA MSE A 1 24.126 11.238 45.889 1.00 50.13 C HETATM 3 C MSE A 1 22.685 10.923 46.389 1.00 47.85 C HETATM 4 O MSE A 1 22.308 9.768 46.527 1.00 48.75 O HETATM 5 CB MSE A 1 24.097 11.632 44.410 1.00 50.80 C HETATM 6 CG MSE A 1 24.104 13.129 44.073 1.00 52.59 C HETATM 7 SE MSE A 1 24.884 13.373 42.230 1.00 56.70 SE HETATM 8 CE MSE A 1 26.665 12.574 42.524 1.00 57.90 C