PDB Short entry for 1ZJO HEADER TRANSFERASE 29-APR-05 1ZJO TITLE CRYSTAL STRUCTURE OF HUMAN N-ACETYLGALACTOSAMINYLTRANSFERASE (GTA) TITLE 2 COMPLEXED WITH GALACTOSE-GREASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTO-BLOOD GROUP ABO SYSTEM TRANSFERASE (NAGAT) INCLUDES: COMPND 3 GLYCOPROTEIN-FUCOSYLGALACTOSIDE ALPHA-N- COMPND 4 ACETYLGALACTOSAMINYLTRANSFERASE; COMPND 5 CHAIN: A; COMPND 6 SYNONYM: FUCOSYLGLYCOPROTEIN ALPHA-N-ACETYLGALACTOSAMINYLTRANSFERASE COMPND 7 (HISTO-BLOOD GROUP A TRANSFERASE) (A TRANSFERASE); COMPND 8 EC: 2.4.1.40; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABO; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCW DELTA 1AC (E-H) KEYWDS GTA, ABO(H), BLOOD GROUP, H-ANTIGEN, GLYCOSYLTRANSFERASE, RETAINING, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.LETTS,N.L.ROSE,Y.R.FANG,C.H.BARRY,S.N.BORISOVA,N.O.SETO, AUTHOR 2 M.M.PALCIC,S.V.EVANS REVDAT 5 23-AUG-23 1ZJO 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1ZJO 1 VERSN REVDAT 3 24-FEB-09 1ZJO 1 VERSN REVDAT 2 21-FEB-06 1ZJO 1 JRNL REVDAT 1 13-DEC-05 1ZJO 0 JRNL AUTH J.A.LETTS,N.L.ROSE,Y.R.FANG,C.H.BARRY,S.N.BORISOVA,N.O.SETO, JRNL AUTH 2 M.M.PALCIC,S.V.EVANS JRNL TITL DIFFERENTIAL RECOGNITION OF THE TYPE I AND II H ANTIGEN JRNL TITL 2 ACCEPTORS BY THE HUMAN ABO(H) BLOOD GROUP A AND B JRNL TITL 3 GLYCOSYLTRANSFERASES. JRNL REF J.BIOL.CHEM. V. 281 3625 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16326711 JRNL DOI 10.1074/JBC.M507620200 REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 37606 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2151 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 234 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZJO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000032792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1LZ0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.69500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.69500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.28500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.78500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.28500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.78500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.69500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.28500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.78500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.69500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.28500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.78500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 9860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -364.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 52.57000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 39.69500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 176 REMARK 465 ALA A 177 REMARK 465 TYR A 178 REMARK 465 LYS A 179 REMARK 465 ARG A 180 REMARK 465 TRP A 181 REMARK 465 GLN A 182 REMARK 465 ASP A 183 REMARK 465 VAL A 184 REMARK 465 SER A 185 REMARK 465 MET A 186 REMARK 465 ARG A 187 REMARK 465 ARG A 188 REMARK 465 MET A 189 REMARK 465 GLU A 190 REMARK 465 MET A 191 REMARK 465 ILE A 192 REMARK 465 SER A 193 REMARK 465 ASP A 194 REMARK 465 PHE A 195 REMARK 465 CYS A 196 REMARK 465 LYS A 346 REMARK 465 ASN A 347 REMARK 465 HIS A 348 REMARK 465 GLN A 349 REMARK 465 ALA A 350 REMARK 465 VAL A 351 REMARK 465 ARG A 352 REMARK 465 ASN A 353 REMARK 465 PRO A 354 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 124 -128.76 52.21 REMARK 500 THR A 245 46.67 -82.77 REMARK 500 PHE A 269 98.29 -160.49 REMARK 500 HIS A 301 -126.99 48.54 REMARK 500 LEU A 324 100.69 -163.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 450 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UDP A 2 O1A REMARK 620 2 UDP A 2 O3B 62.6 REMARK 620 3 ASP A 213 OD1 87.2 118.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 404 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 80 SG REMARK 620 2 GLY A 98 O 67.4 REMARK 620 3 HOH A 701 O 72.7 88.8 REMARK 620 4 HOH A 715 O 128.8 114.0 56.5 REMARK 620 5 HOH A 716 O 158.9 103.3 127.3 72.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 403 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 119 OG1 REMARK 620 2 CYS A 209 SG 90.7 REMARK 620 3 HOH A 728 O 93.7 175.0 REMARK 620 4 HOH A 729 O 110.8 89.8 90.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 401 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 284 SG REMARK 620 2 HOH A 734 O 170.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 405 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 284 SG REMARK 620 2 CYS A 284 N 62.3 REMARK 620 3 HIS A 305 O 86.1 146.9 REMARK 620 4 HOH A 732 O 166.7 120.0 93.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 407 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 288 SD REMARK 620 2 ASP A 302 OD2 79.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DR4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZHJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN N-ACETYLGALACTOSAMINYLTRANSFERASE (GTA) REMARK 900 COMPLEXED WITH GALACTOSE REMARK 900 RELATED ID: 1ZI1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN N-ACETYLGALACTOSAMINYLTRANSFERASE (GTA) REMARK 900 COMPLEXED WITH LACTOSE REMARK 900 RELATED ID: 1ZI3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN N-ACETYLGALACTOSAMINYLTRANSFERASE (GTA) REMARK 900 COMPLEXED WITH N-ACETYLLACTOSAMINE REMARK 900 RELATED ID: 1ZI4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN N-ACETYLGALACTOSAMINYLTRANSFERASE (GTA) REMARK 900 COMPLEXED WITH H TYPE II TRISACCHARIDE REMARK 900 RELATED ID: 1ZI5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN N-ACETYLGALACTOSAMINYLTRANSFERASE (GTA) REMARK 900 COMPLEXED WITH H TYPE I TRISACCHARIDE REMARK 900 RELATED ID: 1ZJ0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALACTOSYLTRANSFERASE (GTB) COMPLEXED REMARK 900 WITH LACTOSE REMARK 900 RELATED ID: 1ZIZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALACTOSYLTRANSFERASE (GTB) COMPLEXED REMARK 900 WITH GALACTOSE REMARK 900 RELATED ID: 1ZJ2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALACTOSYLTRANSFERASE (GTB) COMPLEXED REMARK 900 WITH H TYPE I TRISACCHARIDE REMARK 900 RELATED ID: 1ZJ1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALACTOSYLTRANSFERASE (GTB) COMPLEXED REMARK 900 WITH N-ACETYLLACTOSAMINE REMARK 900 RELATED ID: 1ZJ3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALACTOSYLTRANSFERASE (GTB) COMPLEXED REMARK 900 WITH H TYPE II TRISACCHARIDE REMARK 900 RELATED ID: 1ZJP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALACTOSYLTRANSFERASE (GTB) COMPLEXED REMARK 900 WITH GALACTOSE-GREASE DBREF 1ZJO A 64 354 UNP P16442 BGAT_HUMAN 64 354 SEQADV 1ZJO PHE A 62 UNP P16442 CLONING ARTIFACT SEQADV 1ZJO MET A 63 UNP P16442 CLONING ARTIFACT SEQRES 1 A 293 PHE MET VAL SER LEU PRO ARG MET VAL TYR PRO GLN PRO SEQRES 2 A 293 LYS VAL LEU THR PRO CYS ARG LYS ASP VAL LEU VAL VAL SEQRES 3 A 293 THR PRO TRP LEU ALA PRO ILE VAL TRP GLU GLY THR PHE SEQRES 4 A 293 ASN ILE ASP ILE LEU ASN GLU GLN PHE ARG LEU GLN ASN SEQRES 5 A 293 THR THR ILE GLY LEU THR VAL PHE ALA ILE LYS LYS TYR SEQRES 6 A 293 VAL ALA PHE LEU LYS LEU PHE LEU GLU THR ALA GLU LYS SEQRES 7 A 293 HIS PHE MET VAL GLY HIS ARG VAL HIS TYR TYR VAL PHE SEQRES 8 A 293 THR ASP GLN PRO ALA ALA VAL PRO ARG VAL THR LEU GLY SEQRES 9 A 293 THR GLY ARG GLN LEU SER VAL LEU GLU VAL ARG ALA TYR SEQRES 10 A 293 LYS ARG TRP GLN ASP VAL SER MET ARG ARG MET GLU MET SEQRES 11 A 293 ILE SER ASP PHE CYS GLU ARG ARG PHE LEU SER GLU VAL SEQRES 12 A 293 ASP TYR LEU VAL CYS VAL ASP VAL ASP MET GLU PHE ARG SEQRES 13 A 293 ASP HIS VAL GLY VAL GLU ILE LEU THR PRO LEU PHE GLY SEQRES 14 A 293 THR LEU HIS PRO GLY PHE TYR GLY SER SER ARG GLU ALA SEQRES 15 A 293 PHE THR TYR GLU ARG ARG PRO GLN SER GLN ALA TYR ILE SEQRES 16 A 293 PRO LYS ASP GLU GLY ASP PHE TYR TYR LEU GLY GLY PHE SEQRES 17 A 293 PHE GLY GLY SER VAL GLN GLU VAL GLN ARG LEU THR ARG SEQRES 18 A 293 ALA CYS HIS GLN ALA MET MET VAL ASP GLN ALA ASN GLY SEQRES 19 A 293 ILE GLU ALA VAL TRP HIS ASP GLU SER HIS LEU ASN LYS SEQRES 20 A 293 TYR LEU LEU ARG HIS LYS PRO THR LYS VAL LEU SER PRO SEQRES 21 A 293 GLU TYR LEU TRP ASP GLN GLN LEU LEU GLY TRP PRO ALA SEQRES 22 A 293 VAL LEU ARG LYS LEU ARG PHE THR ALA VAL PRO LYS ASN SEQRES 23 A 293 HIS GLN ALA VAL ARG ASN PRO HET HG A 401 1 HET CL A 402 1 HET HG A 403 1 HET HG A 404 1 HET HG A 405 1 HET CL A 406 1 HET HG A 407 1 HET MN A 450 1 HET DR4 A 1 24 HET UDP A 2 25 HETNAM HG MERCURY (II) ION HETNAM CL CHLORIDE ION HETNAM MN MANGANESE (II) ION HETNAM DR4 METHYL 9-(BETA-D-TALOPYRANOSYLOXY)NONANOATE HETNAM UDP URIDINE-5'-DIPHOSPHATE HETSYN DR4 GALACTOSE GREASE FORMUL 2 HG 5(HG 2+) FORMUL 3 CL 2(CL 1-) FORMUL 9 MN MN 2+ FORMUL 10 DR4 C16 H30 O8 FORMUL 11 UDP C9 H14 N2 O12 P2 FORMUL 12 HOH *234(H2 O) HELIX 1 1 ASN A 101 LEU A 111 1 11 HELIX 2 2 ILE A 123 ALA A 128 5 6 HELIX 3 3 PHE A 129 PHE A 141 1 13 HELIX 4 4 GLN A 155 VAL A 159 5 5 HELIX 5 5 GLU A 197 VAL A 204 1 8 HELIX 6 6 GLY A 221 LEU A 225 5 5 HELIX 7 7 SER A 240 PHE A 244 5 5 HELIX 8 8 VAL A 274 ASN A 294 1 21 HELIX 9 9 HIS A 301 HIS A 313 1 13 HELIX 10 10 PRO A 321 LEU A 324 5 4 HELIX 11 11 ASP A 326 GLY A 331 1 6 SHEET 1 A 8 ILE A 94 VAL A 95 0 SHEET 2 A 8 LYS A 317 LEU A 319 1 O VAL A 318 N VAL A 95 SHEET 3 A 8 LEU A 228 THR A 231 1 N GLY A 230 O LEU A 319 SHEET 4 A 8 PHE A 269 SER A 273 -1 O GLY A 271 N PHE A 229 SHEET 5 A 8 TYR A 206 VAL A 210 -1 N LEU A 207 O GLY A 272 SHEET 6 A 8 THR A 115 ALA A 122 1 N GLY A 117 O TYR A 206 SHEET 7 A 8 ARG A 146 THR A 153 1 O PHE A 152 N ALA A 122 SHEET 8 A 8 ARG A 168 GLU A 174 1 O GLN A 169 N TYR A 149 SHEET 1 B 2 MET A 214 PHE A 216 0 SHEET 2 B 2 PHE A 341 ALA A 343 -1 O THR A 342 N GLU A 215 LINK O1A UDP A 2 MN MN A 450 1555 1555 2.32 LINK O3B UDP A 2 MN MN A 450 1555 1555 2.36 LINK SG CYS A 80 HG HG A 404 1555 1555 2.79 LINK O GLY A 98 HG HG A 404 1555 1555 2.78 LINK OG1 THR A 119 HG HG A 403 1555 1555 2.93 LINK SG CYS A 209 HG HG A 403 1555 1555 2.40 LINK OD1 ASP A 213 MN MN A 450 1555 1555 2.56 LINK SG CYS A 284 HG HG A 401 1555 1555 2.50 LINK SG CYS A 284 HG HG A 405 1555 1555 2.53 LINK N CYS A 284 HG HG A 405 1555 1555 3.43 LINK SD MET A 288 HG HG A 407 1555 1555 2.71 LINK OD2 ASP A 302 HG HG A 407 1555 1555 3.44 LINK O HIS A 305 HG HG A 405 1555 1555 3.18 LINK HG HG A 401 O HOH A 734 1555 1555 2.43 LINK HG HG A 403 O HOH A 728 1555 1555 2.36 LINK HG HG A 403 O HOH A 729 1555 1555 2.30 LINK HG HG A 404 O HOH A 701 1555 1555 3.41 LINK HG HG A 404 O HOH A 715 1555 1555 3.27 LINK HG HG A 404 O HOH A 716 1555 1555 2.35 LINK HG HG A 405 O HOH A 732 1555 1555 2.54 SITE 1 AC1 3 LEU A 280 CYS A 284 HOH A 734 SITE 1 AC2 4 THR A 119 PHE A 121 CYS A 209 CL A 406 SITE 1 AC3 4 THR A 119 CYS A 209 HOH A 728 HOH A 729 SITE 1 AC4 3 CYS A 80 GLY A 98 HOH A 716 SITE 1 AC5 4 CYS A 284 HIS A 305 TYR A 309 HOH A 732 SITE 1 AC6 5 CYS A 209 VAL A 210 CL A 402 HOH A 600 SITE 2 AC6 5 HOH A 624 SITE 1 AC7 4 CYS A 284 HIS A 285 MET A 288 ASP A 302 SITE 1 AC8 3 UDP A 2 ASP A 211 ASP A 213 SITE 1 AC9 14 UDP A 2 HIS A 233 GLY A 235 PHE A 236 SITE 2 AC9 14 THR A 245 LEU A 266 TRP A 300 GLU A 303 SITE 3 AC9 14 LEU A 324 LEU A 329 LEU A 330 HOH A 589 SITE 4 AC9 14 HOH A 595 HOH A 626 SITE 1 BC1 11 DR4 A 1 PHE A 121 ILE A 123 LYS A 125 SITE 2 BC1 11 TYR A 126 ASP A 211 VAL A 212 ASP A 213 SITE 3 BC1 11 MN A 450 HOH A 649 HOH A 662 CRYST1 52.570 149.570 79.390 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019022 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006686 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012596 0.00000