PDB Full entry for 211D HEADER DNA 13-JUN-95 211D TITLE THE CRYSTAL AND MOLECULAR STRUCTURE OF A NEW Z-DNA CRYSTAL FORM: TITLE 2 D[CGT(2-NH2-A) CG] AND ITS PLATINATED DERIVATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*CP*GP*TP*(1AP)P*CP*(PT(NH3)3)G)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS Z-DNA, DOUBLE HELIX, MODIFIED, DNA EXPDTA X-RAY DIFFRACTION AUTHOR G.N.PARKINSON,G.M.ARVANTIS,L.LESSINGER,S.L.GINELL,R.JONES,B.GAFFNEY, AUTHOR 2 H.M.BERMAN REVDAT 5 14-FEB-24 211D 1 REMARK LINK REVDAT 4 18-APR-18 211D 1 REMARK REVDAT 3 24-FEB-09 211D 1 VERSN REVDAT 2 01-APR-03 211D 1 JRNL REVDAT 1 22-MAR-96 211D 0 JRNL AUTH G.N.PARKINSON,G.M.ARVANITIS,L.LESSINGER,S.L.GINELL,R.JONES, JRNL AUTH 2 B.GAFFNEY,H.M.BERMAN JRNL TITL CRYSTAL AND MOLECULAR STRUCTURE OF A NEW Z-DNA CRYSTAL FORM: JRNL TITL 2 D[CGT(2-NH2-A)CG] AND ITS PLATINATED DERIVATIVE. JRNL REF BIOCHEMISTRY V. 34 15487 1995 JRNL REFN ISSN 0006-2960 JRNL PMID 7492550 JRNL DOI 10.1021/BI00047A014 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 70.4 REMARK 3 NUMBER OF REFLECTIONS : 1583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 121 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.660 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 211D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000177569. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 277.00 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ELLIOTT GX-21 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : DIFFRACTOMETER REMARK 200 DETECTOR MANUFACTURER : ENRAF-NONIUS CAD4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1741 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.96533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 12.98267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 12.98267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.96533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 38.94800 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OP2 DG A 2 C3 SPM A 8 2444 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1AP A 4 O3' DC A 5 P 0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1AP A 4 C3' - O3' - P ANGL. DEV. = 14.1 DEGREES REMARK 500 DC A 5 O3' - P - OP2 ANGL. DEV. = 7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PTN A 7 PT REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 6 N7 REMARK 620 2 PTN A 7 N1 87.6 REMARK 620 3 PTN A 7 N2 91.6 179.1 REMARK 620 4 PTN A 7 N3 156.3 89.7 91.1 REMARK 620 5 DG A 6 C8 22.1 99.5 79.6 169.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PTN A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPM A 8 DBREF 211D A 1 6 PDB 211D 211D 1 6 SEQRES 1 A 6 DC DG DT 1AP DC DG MODRES 211D 1AP A 4 DA 2,6-DIAMINOPURINE NUCLEOTIDE HET 1AP A 4 22 HET PTN A 7 4 HET SPM A 8 14 HETNAM 1AP 2,6-DIAMINOPURINE NUCLEOTIDE HETNAM PTN PLATINUM TRIAMINE ION HETNAM SPM SPERMINE FORMUL 1 1AP C10 H15 N6 O6 P FORMUL 2 PTN H9 N3 PT 2+ FORMUL 3 SPM C10 H26 N4 FORMUL 4 HOH *23(H2 O) LINK O3' DT A 3 P 1AP A 4 1555 1555 1.62 LINK O3' 1AP A 4 P A DC A 5 1555 1555 1.69 LINK O3' 1AP A 4 P B DC A 5 1555 1555 1.59 LINK N7 DG A 6 PT PTN A 7 1555 1555 2.25 LINK C8 DG A 6 PT PTN A 7 1555 1555 3.08 SITE 1 AC1 4 DG A 2 DC A 5 DG A 6 SPM A 8 SITE 1 AC2 10 DG A 2 DT A 3 1AP A 4 DC A 5 SITE 2 AC2 10 DG A 6 PTN A 7 HOH A 9 HOH A 12 SITE 3 AC2 10 HOH A 24 HOH A 31 CRYST1 25.193 25.193 38.948 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.039694 0.022917 0.000000 0.00000 SCALE2 0.000000 0.045834 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025675 0.00000 ATOM 1 O5' DC A 1 2.540 -11.894 14.501 1.00 23.70 O ATOM 2 C5' DC A 1 2.175 -12.369 15.800 1.00 14.90 C ATOM 3 C4' DC A 1 1.381 -13.658 15.805 1.00 13.31 C ATOM 4 O4' DC A 1 0.122 -13.485 15.107 1.00 12.14 O ATOM 5 C3' DC A 1 2.065 -14.890 15.185 1.00 12.18 C ATOM 6 O3' DC A 1 1.843 -16.077 15.980 1.00 13.59 O ATOM 7 C2' DC A 1 1.304 -15.094 13.889 1.00 12.12 C ATOM 8 C1' DC A 1 -0.083 -14.601 14.260 1.00 11.77 C ATOM 9 N1 DC A 1 -0.891 -14.164 13.108 1.00 11.39 N ATOM 10 C2 DC A 1 -1.681 -15.117 12.469 1.00 12.12 C ATOM 11 O2 DC A 1 -1.657 -16.281 12.893 1.00 13.31 O ATOM 12 N3 DC A 1 -2.443 -14.751 11.414 1.00 10.05 N ATOM 13 C4 DC A 1 -2.429 -13.486 10.996 1.00 9.49 C ATOM 14 N4 DC A 1 -3.199 -13.167 9.957 1.00 9.82 N ATOM 15 C5 DC A 1 -1.621 -12.486 11.628 1.00 10.64 C ATOM 16 C6 DC A 1 -0.875 -12.868 12.673 1.00 10.01 C ATOM 17 P DG A 2 2.944 -16.562 17.039 1.00 11.64 P ATOM 18 OP1 DG A 2 4.291 -16.263 16.522 1.00 14.92 O ATOM 19 OP2 DG A 2 2.578 -17.948 17.386 1.00 13.56 O ATOM 20 O5' DG A 2 2.705 -15.619 18.312 1.00 11.73 O ATOM 21 C5' DG A 2 1.435 -15.601 18.941 1.00 10.51 C ATOM 22 C4' DG A 2 1.396 -14.523 19.995 1.00 10.62 C ATOM 23 O4' DG A 2 1.521 -13.220 19.387 1.00 10.69 O ATOM 24 C3' DG A 2 0.087 -14.519 20.776 1.00 10.38 C ATOM 25 O3' DG A 2 0.297 -15.219 21.997 1.00 9.33 O ATOM 26 C2' DG A 2 -0.207 -13.050 21.018 1.00 11.28 C ATOM 27 C1' DG A 2 0.606 -12.306 19.959 1.00 9.53 C ATOM 28 N9 DG A 2 -0.147 -11.685 18.875 1.00 10.47 N ATOM 29 C8 DG A 2 -0.033 -10.389 18.459 1.00 9.60 C ATOM 30 N7 DG A 2 -0.805 -10.104 17.448 1.00 8.87 N ATOM 31 C5 DG A 2 -1.464 -11.294 17.165 1.00 9.58 C ATOM 32 C6 DG A 2 -2.400 -11.618 16.124 1.00 10.30 C ATOM 33 O6 DG A 2 -2.819 -10.896 15.201 1.00 11.88 O ATOM 34 N1 DG A 2 -2.833 -12.931 16.220 1.00 9.79 N ATOM 35 C2 DG A 2 -2.414 -13.838 17.167 1.00 10.03 C ATOM 36 N2 DG A 2 -2.964 -15.063 17.094 1.00 8.26 N ATOM 37 N3 DG A 2 -1.523 -13.563 18.118 1.00 10.15 N ATOM 38 C4 DG A 2 -1.094 -12.279 18.051 1.00 10.13 C ATOM 39 P DT A 3 -0.796 -16.251 22.506 1.00 10.43 P ATOM 40 OP1 DT A 3 -0.336 -16.787 23.809 1.00 12.15 O ATOM 41 OP2 DT A 3 -1.069 -17.196 21.398 1.00 12.79 O ATOM 42 O5' DT A 3 -2.043 -15.292 22.756 1.00 11.78 O ATOM 43 C5' DT A 3 -3.055 -15.624 23.697 1.00 10.17 C ATOM 44 C4' DT A 3 -4.387 -15.746 22.997 1.00 11.07 C ATOM 45 O4' DT A 3 -4.732 -14.485 22.371 1.00 9.13 O ATOM 46 C3' DT A 3 -4.443 -16.809 21.889 1.00 12.23 C ATOM 47 O3' DT A 3 -5.660 -17.573 21.987 1.00 14.74 O ATOM 48 C2' DT A 3 -4.491 -15.979 20.615 1.00 10.52 C ATOM 49 C1' DT A 3 -5.250 -14.754 21.090 1.00 9.08 C ATOM 50 N1 DT A 3 -5.078 -13.547 20.252 1.00 9.13 N ATOM 51 C2 DT A 3 -5.768 -13.535 19.054 1.00 9.87 C ATOM 52 O2 DT A 3 -6.455 -14.465 18.676 1.00 9.77 O ATOM 53 N3 DT A 3 -5.613 -12.402 18.313 1.00 8.48 N ATOM 54 C4 DT A 3 -4.856 -11.300 18.624 1.00 9.32 C ATOM 55 O4 DT A 3 -4.829 -10.354 17.845 1.00 12.08 O ATOM 56 C5 DT A 3 -4.144 -11.369 19.890 1.00 9.08 C ATOM 57 C7 DT A 3 -3.300 -10.210 20.314 1.00 9.00 C ATOM 58 C6 DT A 3 -4.285 -12.482 20.634 1.00 8.14 C HETATM 59 N1 1AP A 4 -7.033 -12.367 23.100 1.00 8.82 N HETATM 60 C2 1AP A 4 -7.480 -13.559 23.533 1.00 8.32 C HETATM 61 C4 1AP A 4 -6.114 -13.619 25.269 1.00 11.41 C HETATM 62 C5 1AP A 4 -5.549 -12.400 24.937 1.00 11.56 C HETATM 63 C6 1AP A 4 -6.053 -11.751 23.792 1.00 8.58 C HETATM 64 C8 1AP A 4 -4.487 -13.101 26.644 1.00 13.43 C HETATM 65 N2 1AP A 4 -8.432 -14.181 22.829 1.00 8.74 N HETATM 66 N3 1AP A 4 -7.100 -14.259 24.601 1.00 10.25 N HETATM 67 N9 1AP A 4 -5.424 -14.062 26.381 1.00 11.40 N HETATM 68 N7 1AP A 4 -4.521 -12.082 25.821 1.00 13.35 N HETATM 69 N6 1AP A 4 -5.624 -10.565 23.365 1.00 11.27 N HETATM 70 P 1AP A 4 -5.677 -19.004 22.735 1.00 17.21 P HETATM 71 OP1 1AP A 4 -4.363 -19.670 22.599 1.00 16.71 O HETATM 72 OP2 1AP A 4 -6.914 -19.691 22.300 1.00 19.25 O HETATM 73 O5' 1AP A 4 -5.804 -18.642 24.280 1.00 18.28 O HETATM 74 C5' 1AP A 4 -6.721 -17.664 24.738 1.00 16.94 C HETATM 75 C4' 1AP A 4 -6.441 -17.323 26.185 1.00 14.83 C HETATM 76 O4' 1AP A 4 -5.357 -16.370 26.243 1.00 14.64 O HETATM 77 C1' 1AP A 4 -5.637 -15.306 27.124 1.00 12.47 C HETATM 78 C2' 1AP A 4 -7.030 -15.571 27.724 1.00 15.22 C HETATM 79 C3' 1AP A 4 -7.639 -16.660 26.850 1.00 15.16 C HETATM 80 O3' 1AP A 4 -8.341 -17.533 27.652 1.00 20.81 O ATOM 81 P A DC A 5 -9.893 -17.963 27.146 0.70 19.51 P ATOM 82 P B DC A 5 -9.651 -17.398 28.541 0.30 16.78 P ATOM 83 OP1A DC A 5 -10.367 -18.934 28.092 0.70 23.56 O ATOM 84 OP1B DC A 5 -9.280 -16.668 29.775 0.30 17.69 O ATOM 85 OP2A DC A 5 -10.121 -18.126 25.724 0.70 22.10 O ATOM 86 OP2B DC A 5 -10.348 -18.681 28.769 0.30 18.82 O ATOM 87 O5' DC A 5 -10.622 -16.570 27.520 1.00 17.68 O ATOM 88 C5' DC A 5 -11.943 -16.459 27.927 1.00 13.51 C ATOM 89 C4' DC A 5 -12.617 -15.406 27.078 1.00 11.33 C ATOM 90 O4' DC A 5 -11.898 -14.154 27.172 1.00 11.33 O ATOM 91 C3' DC A 5 -12.627 -15.762 25.585 1.00 13.89 C ATOM 92 O3' DC A 5 -13.910 -15.458 25.045 1.00 16.41 O ATOM 93 C2' DC A 5 -11.591 -14.827 24.993 1.00 11.55 C ATOM 94 C1' DC A 5 -11.779 -13.624 25.871 1.00 9.80 C ATOM 95 N1 DC A 5 -10.672 -12.659 25.863 1.00 8.93 N ATOM 96 C2 DC A 5 -10.635 -11.699 24.843 1.00 8.04 C ATOM 97 O2 DC A 5 -11.494 -11.738 23.960 1.00 10.38 O ATOM 98 N3 DC A 5 -9.658 -10.770 24.837 1.00 8.16 N ATOM 99 C4 DC A 5 -8.734 -10.774 25.794 1.00 6.71 C ATOM 100 N4 DC A 5 -7.812 -9.819 25.760 1.00 7.94 N ATOM 101 C5 DC A 5 -8.728 -11.760 26.839 1.00 8.06 C ATOM 102 C6 DC A 5 -9.702 -12.679 26.830 1.00 7.18 C ATOM 103 P DG A 6 -15.003 -16.623 24.897 1.00 19.40 P ATOM 104 OP1 DG A 6 -14.347 -17.831 24.340 1.00 22.06 O ATOM 105 OP2 DG A 6 -16.134 -15.990 24.180 1.00 22.86 O ATOM 106 O5' DG A 6 -15.438 -16.952 26.398 1.00 18.51 O ATOM 107 C5' DG A 6 -16.344 -16.098 27.091 1.00 16.74 C ATOM 108 C4' DG A 6 -16.632 -16.657 28.459 1.00 14.24 C ATOM 109 O4' DG A 6 -15.415 -16.591 29.227 1.00 13.63 O ATOM 110 C3' DG A 6 -17.685 -15.877 29.243 1.00 14.00 C ATOM 111 O3' DG A 6 -18.454 -16.779 30.039 1.00 14.70 O ATOM 112 C2' DG A 6 -16.869 -14.944 30.114 1.00 12.81 C ATOM 113 C1' DG A 6 -15.596 -15.746 30.354 1.00 12.91 C ATOM 114 N9 DG A 6 -14.411 -14.964 30.510 1.00 13.14 N ATOM 115 C8 DG A 6 -13.368 -15.228 31.360 1.00 11.88 C ATOM 116 N7 DG A 6 -12.393 -14.364 31.255 1.00 13.96 N ATOM 117 C5 DG A 6 -12.811 -13.480 30.264 1.00 11.41 C ATOM 118 C6 DG A 6 -12.143 -12.373 29.678 1.00 10.26 C ATOM 119 O6 DG A 6 -11.025 -11.924 29.950 1.00 10.12 O ATOM 120 N1 DG A 6 -12.905 -11.785 28.674 1.00 11.40 N ATOM 121 C2 DG A 6 -14.156 -12.201 28.288 1.00 13.34 C ATOM 122 N2 DG A 6 -14.753 -11.469 27.347 1.00 14.57 N ATOM 123 N3 DG A 6 -14.782 -13.242 28.807 1.00 13.44 N ATOM 124 C4 DG A 6 -14.056 -13.832 29.790 1.00 11.97 C TER 125 DG A 6 HETATM 126 PT PTN A 7 -10.515 -14.760 32.420 0.30 16.52 PT HETATM 127 N1 PTN A 7 -9.512 -14.695 30.662 0.30 15.42 N HETATM 128 N2 PTN A 7 -11.530 -14.835 34.141 0.30 14.18 N HETATM 129 N3 PTN A 7 -8.791 -14.283 33.410 0.30 14.92 N HETATM 130 N1 SPM A 8 -6.908 -16.983 31.281 0.30 42.88 N HETATM 131 C2 SPM A 8 -6.671 -15.509 31.457 0.30 42.75 C HETATM 132 C3 SPM A 8 -5.363 -15.168 32.198 0.30 42.30 C HETATM 133 C4 SPM A 8 -5.630 -14.477 33.492 0.30 41.37 C HETATM 134 N5 SPM A 8 -5.874 -12.959 33.233 0.30 40.28 N HETATM 135 C6 SPM A 8 -4.558 -12.389 33.526 0.30 39.89 C HETATM 136 C7 SPM A 8 -4.351 -12.220 34.908 0.30 39.89 C HETATM 137 C8 SPM A 8 -3.938 -10.616 34.994 0.30 40.50 C HETATM 138 C9 SPM A 8 -3.291 -10.407 33.508 0.30 40.81 C HETATM 139 N10 SPM A 8 -2.713 -9.089 33.189 0.30 41.19 N HETATM 140 C11 SPM A 8 -3.708 -8.380 32.234 0.30 40.47 C HETATM 141 C12 SPM A 8 -3.488 -6.868 32.385 0.30 39.85 C HETATM 142 C13 SPM A 8 -4.599 -6.106 31.696 0.30 39.33 C HETATM 143 N14 SPM A 8 -4.418 -5.876 30.344 0.30 39.02 N HETATM 144 O HOH A 9 -1.986 -17.340 18.670 1.00 14.11 O HETATM 145 O HOH A 10 -0.082 -18.652 17.198 1.00 13.96 O HETATM 146 O HOH A 11 -1.859 -18.133 15.082 1.00 14.80 O HETATM 147 O HOH A 12 -1.258 -19.211 24.905 1.00 26.94 O HETATM 148 O HOH A 13 2.035 -18.092 24.098 1.00 33.23 O HETATM 149 O HOH A 14 -3.449 -18.850 26.453 1.00 39.98 O HETATM 150 O HOH A 15 -15.475 -13.274 23.454 0.50 23.80 O HETATM 151 O HOH A 16 4.143 -12.075 19.045 1.00 40.32 O HETATM 152 O HOH A 17 -9.814 -17.479 22.679 1.00 29.98 O HETATM 153 O HOH A 18 -5.768 -17.032 17.200 1.00 35.76 O HETATM 154 O HOH A 19 -1.279 -9.445 13.597 1.00 26.52 O HETATM 155 O HOH A 20 -9.747 -21.768 28.692 0.50 28.69 O HETATM 156 O HOH A 21 -3.549 -10.312 8.938 0.50 24.02 O HETATM 157 O HOH A 22 -2.570 -22.011 27.487 0.50 38.07 O HETATM 158 O HOH A 23 5.680 -13.756 16.944 0.50 26.67 O HETATM 159 O HOH A 24 3.597 -16.993 21.886 0.50 38.13 O HETATM 160 O HOH A 25 -1.320 -8.587 11.062 0.50 47.24 O HETATM 161 O HOH A 26 -11.258 -15.723 20.100 1.00 38.66 O HETATM 162 O HOH A 27 -6.821 -19.716 29.687 0.50 26.58 O HETATM 163 O HOH A 28 -6.368 -11.992 29.842 1.00 35.47 O HETATM 164 O HOH A 29 -6.231 -9.852 28.059 1.00 38.70 O HETATM 165 O HOH A 30 -4.524 -9.332 25.931 1.00 29.68 O HETATM 166 O HOH A 31 -4.210 -19.087 17.924 0.50 27.83 O CONECT 47 70 CONECT 59 60 63 CONECT 60 59 65 66 CONECT 61 62 66 67 CONECT 62 61 63 68 CONECT 63 59 62 69 CONECT 64 67 68 CONECT 65 60 CONECT 66 60 61 CONECT 67 61 64 77 CONECT 68 62 64 CONECT 69 63 CONECT 70 47 71 72 73 CONECT 71 70 CONECT 72 70 CONECT 73 70 74 CONECT 74 73 75 CONECT 75 74 76 79 CONECT 76 75 77 CONECT 77 67 76 78 CONECT 78 77 79 CONECT 79 75 78 80 CONECT 80 79 81 82 CONECT 81 80 CONECT 82 80 CONECT 115 126 CONECT 116 126 CONECT 126 115 116 127 128 CONECT 126 129 CONECT 127 126 CONECT 128 126 CONECT 129 126 CONECT 130 131 CONECT 131 130 132 CONECT 132 131 133 CONECT 133 132 134 CONECT 134 133 135 CONECT 135 134 136 CONECT 136 135 137 CONECT 137 136 138 CONECT 138 137 139 CONECT 139 138 140 CONECT 140 139 141 CONECT 141 140 142 CONECT 142 141 143 CONECT 143 142 MASTER 290 0 3 0 0 0 4 6 162 1 46 1 END