PDB Full entry for 238D HEADER DNA 02-NOV-95 238D TITLE CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGG(BR)CATGCCT): TITLE 2 COMPARISON WITH D(AGGCATGCCT) AND IMPLICATIONS FOR COBALT TITLE 3 HEXAMMINE BINDING TO DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*AP*GP*GP*(CBR)P*AP*TP*GP*CP*CP*T)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS A-DNA, DOUBLE HELIX, FLIPPED-OUT BASES, BASE TRIPLET EXPDTA X-RAY DIFFRACTION AUTHOR C.M.NUNN REVDAT 3 24-FEB-09 238D 1 VERSN REVDAT 2 01-APR-03 238D 1 JRNL REVDAT 1 30-JAN-96 238D 0 JRNL AUTH C.M.NUNN JRNL TITL CRYSTAL STRUCTURE OF D(AGGBRCATGCCT): IMPLICATIONS JRNL TITL 2 FOR COBALT HEXAMMINE BINDING TO DNA JRNL REF J.BIOMOL.STRUCT.DYN. V. 14 49 1996 JRNL REFN ISSN 0739-1102 JRNL PMID 8877561 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 1748 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : 29.40 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 202 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 56 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.027 REMARK 3 BOND ANGLES (DEGREES) : 4.25 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 29.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.04 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 238D COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-94 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1777 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 9.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 287.00K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.70000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 51.40000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.55000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 64.25000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 12.85000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 25.70000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 51.40000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 64.25000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 38.55000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 12.85000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 38.55000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG A 2 C2' DG A 2 C1' -0.060 REMARK 500 DG A 3 P DG A 3 O5' 0.124 REMARK 500 DG A 3 O3' DG A 3 C3' -0.058 REMARK 500 DG A 3 C5 DG A 3 N7 -0.045 REMARK 500 DG A 3 C8 DG A 3 N9 -0.048 REMARK 500 DG A 3 N9 DG A 3 C4 -0.058 REMARK 500 DA A 5 C2' DA A 5 C1' -0.103 REMARK 500 DA A 5 C5 DA A 5 N7 -0.046 REMARK 500 DA A 5 N7 DA A 5 C8 -0.051 REMARK 500 DT A 6 C5 DT A 6 C6 -0.057 REMARK 500 DG A 7 C5' DG A 7 C4' 0.057 REMARK 500 DG A 7 C2 DG A 7 N2 -0.068 REMARK 500 DT A 10 P DT A 10 O5' 0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA A 1 O4' - C1' - N9 ANGL. DEV. = 4.9 DEGREES REMARK 500 DA A 1 C6 - N1 - C2 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG A 2 C1' - O4' - C4' ANGL. DEV. = -6.8 DEGREES REMARK 500 DG A 2 O4' - C1' - C2' ANGL. DEV. = 4.9 DEGREES REMARK 500 DG A 3 P - O5' - C5' ANGL. DEV. = 12.9 DEGREES REMARK 500 DG A 3 C1' - O4' - C4' ANGL. DEV. = -8.2 DEGREES REMARK 500 DG A 3 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 DG A 3 O4' - C1' - C2' ANGL. DEV. = 3.7 DEGREES REMARK 500 DG A 3 C5 - N7 - C8 ANGL. DEV. = -3.2 DEGREES REMARK 500 DA A 5 O4' - C4' - C3' ANGL. DEV. = -4.2 DEGREES REMARK 500 DA A 5 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 DT A 6 O4' - C4' - C3' ANGL. DEV. = -5.4 DEGREES REMARK 500 DT A 6 C3' - C2' - C1' ANGL. DEV. = -5.9 DEGREES REMARK 500 DT A 6 C2 - N3 - C4 ANGL. DEV. = -4.0 DEGREES REMARK 500 DT A 6 N3 - C4 - C5 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT A 6 N3 - C4 - O4 ANGL. DEV. = -6.0 DEGREES REMARK 500 DG A 7 C4' - C3' - C2' ANGL. DEV. = -6.7 DEGREES REMARK 500 DG A 7 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG A 7 C4 - C5 - N7 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG A 7 C5 - N7 - C8 ANGL. DEV. = -3.3 DEGREES REMARK 500 DG A 7 C5 - C6 - O6 ANGL. DEV. = -4.4 DEGREES REMARK 500 DT A 6 C3' - O3' - P ANGL. DEV. = -7.9 DEGREES REMARK 500 DC A 8 O4' - C1' - C2' ANGL. DEV. = -6.0 DEGREES REMARK 500 DC A 8 O4' - C1' - N1 ANGL. DEV. = 5.4 DEGREES REMARK 500 DC A 9 O4' - C1' - C2' ANGL. DEV. = -4.8 DEGREES REMARK 500 DC A 9 N3 - C4 - N4 ANGL. DEV. = 4.3 DEGREES REMARK 500 DT A 10 C6 - N1 - C2 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT A 10 N3 - C4 - O4 ANGL. DEV. = -8.9 DEGREES REMARK 500 DT A 10 C5 - C4 - O4 ANGL. DEV. = 9.3 DEGREES REMARK 500 DT A 10 C4 - C5 - C7 ANGL. DEV. = 4.7 DEGREES REMARK 500 DT A 10 C6 - C5 - C7 ANGL. DEV. = -6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 56 DISTANCE = 9.27 ANGSTROMS DBREF 238D A 1 10 PDB 238D 238D 1 10 SEQRES 1 A 10 DA DG DG CBR DA DT DG DC DC DT MODRES 238D CBR A 4 DC HET CBR A 4 20 HETNAM CBR 5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE FORMUL 1 CBR C9 H13 BR N3 O7 P FORMUL 2 HOH *56(H2 O) LINK O3' DG A 3 P CBR A 4 1555 1555 1.62 LINK O3' CBR A 4 P DA A 5 1555 1555 1.61 CRYST1 33.200 33.200 77.100 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030120 0.017389 0.000000 0.00000 SCALE2 0.000000 0.034779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012970 0.00000 ATOM 1 O5' DA A 1 8.993 14.933 23.995 1.00 44.06 O ATOM 2 C5' DA A 1 9.246 16.228 23.419 1.00 42.48 C ATOM 3 C4' DA A 1 9.636 16.244 21.964 1.00 40.52 C ATOM 4 O4' DA A 1 10.925 15.720 21.669 1.00 39.78 O ATOM 5 C3' DA A 1 8.633 15.370 21.286 1.00 40.18 C ATOM 6 O3' DA A 1 7.621 16.278 20.907 1.00 41.15 O ATOM 7 C2' DA A 1 9.400 14.860 20.122 1.00 39.31 C ATOM 8 C1' DA A 1 10.829 14.917 20.486 1.00 37.24 C ATOM 9 N9 DA A 1 11.297 13.555 20.680 1.00 34.09 N ATOM 10 C8 DA A 1 10.625 12.383 20.819 1.00 33.47 C ATOM 11 N7 DA A 1 11.406 11.353 20.953 1.00 32.73 N ATOM 12 C5 DA A 1 12.655 11.879 20.908 1.00 32.10 C ATOM 13 C6 DA A 1 13.909 11.318 21.047 1.00 31.78 C ATOM 14 N6 DA A 1 14.184 10.025 21.212 1.00 32.13 N ATOM 15 N1 DA A 1 14.923 12.189 20.986 1.00 31.28 N ATOM 16 C2 DA A 1 14.734 13.484 20.801 1.00 30.40 C ATOM 17 N3 DA A 1 13.614 14.111 20.651 1.00 31.72 N ATOM 18 C4 DA A 1 12.598 13.226 20.727 1.00 32.70 C ATOM 19 P DG A 2 6.085 15.888 20.950 1.00 41.62 P ATOM 20 OP1 DG A 2 5.863 14.554 20.337 1.00 42.07 O ATOM 21 OP2 DG A 2 5.384 17.126 20.528 1.00 42.50 O ATOM 22 O5' DG A 2 5.625 15.701 22.491 1.00 41.67 O ATOM 23 C5' DG A 2 5.371 14.478 23.156 1.00 38.03 C ATOM 24 C4' DG A 2 5.015 14.863 24.588 1.00 36.73 C ATOM 25 O4' DG A 2 6.059 15.544 25.319 1.00 34.74 O ATOM 26 C3' DG A 2 3.870 15.863 24.507 1.00 34.99 C ATOM 27 O3' DG A 2 2.710 15.126 24.273 1.00 34.98 O ATOM 28 C2' DG A 2 3.903 16.349 25.944 1.00 33.99 C ATOM 29 C1' DG A 2 5.345 16.499 26.098 1.00 31.90 C ATOM 30 N9 DG A 2 5.816 17.737 25.649 1.00 29.07 N ATOM 31 C8 DG A 2 6.610 18.036 24.583 1.00 29.27 C ATOM 32 N7 DG A 2 6.978 19.296 24.519 1.00 28.73 N ATOM 33 C5 DG A 2 6.365 19.840 25.654 1.00 29.03 C ATOM 34 C6 DG A 2 6.420 21.165 26.131 1.00 28.36 C ATOM 35 O6 DG A 2 7.051 22.103 25.623 1.00 31.85 O ATOM 36 N1 DG A 2 5.707 21.297 27.289 1.00 25.93 N ATOM 37 C2 DG A 2 5.032 20.279 27.911 1.00 25.86 C ATOM 38 N2 DG A 2 4.400 20.577 29.031 1.00 23.84 N ATOM 39 N3 DG A 2 4.966 19.031 27.462 1.00 27.31 N ATOM 40 C4 DG A 2 5.657 18.892 26.335 1.00 28.08 C ATOM 41 P DG A 3 1.491 15.911 23.611 1.00 34.26 P ATOM 42 OP1 DG A 3 0.441 14.842 23.481 1.00 32.45 O ATOM 43 OP2 DG A 3 2.092 16.768 22.510 1.00 32.31 O ATOM 44 O5' DG A 3 0.969 16.971 24.857 1.00 32.46 O ATOM 45 C5' DG A 3 0.056 16.835 25.968 1.00 26.63 C ATOM 46 C4' DG A 3 0.164 18.076 26.800 1.00 24.04 C ATOM 47 O4' DG A 3 1.492 18.532 26.745 1.00 22.50 O ATOM 48 C3' DG A 3 -0.601 19.236 26.256 1.00 23.56 C ATOM 49 O3' DG A 3 -1.913 18.934 26.454 1.00 23.69 O ATOM 50 C2' DG A 3 -0.110 20.316 27.131 1.00 22.03 C ATOM 51 C1' DG A 3 1.353 19.895 27.165 1.00 22.84 C ATOM 52 N9 DG A 3 2.174 20.625 26.264 1.00 21.12 N ATOM 53 C8 DG A 3 2.784 20.177 25.175 1.00 22.95 C ATOM 54 N7 DG A 3 3.473 21.071 24.509 1.00 21.59 N ATOM 55 C5 DG A 3 3.274 22.164 25.263 1.00 21.29 C ATOM 56 C6 DG A 3 3.803 23.432 25.050 1.00 22.21 C ATOM 57 O6 DG A 3 4.620 23.729 24.187 1.00 25.45 O ATOM 58 N1 DG A 3 3.406 24.325 25.997 1.00 20.87 N ATOM 59 C2 DG A 3 2.579 23.980 27.046 1.00 21.32 C ATOM 60 N2 DG A 3 2.288 24.979 27.862 1.00 22.64 N ATOM 61 N3 DG A 3 2.064 22.756 27.272 1.00 20.85 N ATOM 62 C4 DG A 3 2.477 21.905 26.327 1.00 20.97 C HETATM 63 BR CBR A 4 0.054 21.492 23.042 1.00 30.37 BR HETATM 64 P CBR A 4 -3.107 19.523 25.538 1.00 27.45 P HETATM 65 OP1 CBR A 4 -4.390 19.013 26.026 1.00 28.83 O HETATM 66 OP2 CBR A 4 -2.801 19.448 24.063 1.00 28.49 O HETATM 67 O5' CBR A 4 -3.089 21.048 25.967 1.00 26.35 O HETATM 68 N1 CBR A 4 -0.841 24.303 25.762 1.00 23.14 N HETATM 69 C6 CBR A 4 -0.821 23.178 25.034 1.00 23.71 C HETATM 70 C2 CBR A 4 -0.046 25.360 25.388 1.00 23.38 C HETATM 71 O2 CBR A 4 -0.177 26.412 25.994 1.00 24.54 O HETATM 72 N3 CBR A 4 0.801 25.323 24.311 1.00 22.88 N HETATM 73 C4 CBR A 4 0.813 24.184 23.601 1.00 23.21 C HETATM 74 N4 CBR A 4 1.640 24.019 22.565 1.00 21.09 N HETATM 75 C5 CBR A 4 -0.025 23.085 23.969 1.00 23.27 C HETATM 76 C2' CBR A 4 -3.063 25.035 26.721 1.00 24.65 C HETATM 77 C5' CBR A 4 -3.791 21.470 27.143 1.00 25.65 C HETATM 78 C4' CBR A 4 -3.421 22.894 27.472 1.00 25.72 C HETATM 79 O4' CBR A 4 -1.972 23.078 27.496 1.00 25.03 O HETATM 80 C1' CBR A 4 -1.706 24.411 26.995 1.00 24.66 C HETATM 81 C3' CBR A 4 -3.887 23.798 26.356 1.00 24.98 C HETATM 82 O3' CBR A 4 -5.310 23.983 26.474 1.00 27.40 O ATOM 83 P DA A 5 -6.267 24.674 25.381 1.00 28.21 P ATOM 84 OP1 DA A 5 -7.663 24.669 25.897 1.00 30.31 O ATOM 85 OP2 DA A 5 -5.904 23.928 24.142 1.00 30.92 O ATOM 86 O5' DA A 5 -5.725 26.163 25.248 1.00 27.60 O ATOM 87 C5' DA A 5 -5.836 27.167 26.265 1.00 26.86 C ATOM 88 C4' DA A 5 -5.293 28.547 25.903 1.00 25.43 C ATOM 89 O4' DA A 5 -3.914 28.579 25.710 1.00 23.19 O ATOM 90 C3' DA A 5 -5.760 28.907 24.537 1.00 26.37 C ATOM 91 O3' DA A 5 -7.099 29.445 24.650 1.00 29.66 O ATOM 92 C2' DA A 5 -4.730 29.943 24.171 1.00 22.02 C ATOM 93 C1' DA A 5 -3.505 29.379 24.601 1.00 19.83 C ATOM 94 N9 DA A 5 -2.751 28.454 23.686 1.00 16.70 N ATOM 95 C8 DA A 5 -2.880 27.110 23.518 1.00 15.47 C ATOM 96 N7 DA A 5 -2.020 26.568 22.773 1.00 13.26 N ATOM 97 C5 DA A 5 -1.245 27.591 22.380 1.00 14.88 C ATOM 98 C6 DA A 5 -0.162 27.648 21.516 1.00 14.89 C ATOM 99 N6 DA A 5 0.374 26.616 20.882 1.00 14.96 N ATOM 100 N1 DA A 5 0.341 28.858 21.322 1.00 17.12 N ATOM 101 C2 DA A 5 -0.169 29.913 21.933 1.00 16.17 C ATOM 102 N3 DA A 5 -1.167 29.993 22.740 1.00 16.08 N ATOM 103 C4 DA A 5 -1.674 28.758 22.918 1.00 15.47 C ATOM 104 P DT A 6 -8.083 29.628 23.337 1.00 31.93 P ATOM 105 OP1 DT A 6 -9.258 30.414 23.799 1.00 33.87 O ATOM 106 OP2 DT A 6 -8.330 28.240 22.845 1.00 32.09 O ATOM 107 O5' DT A 6 -7.249 30.524 22.268 1.00 28.82 O ATOM 108 C5' DT A 6 -7.574 31.886 22.199 1.00 28.62 C ATOM 109 C4' DT A 6 -6.422 32.641 21.565 1.00 29.82 C ATOM 110 O4' DT A 6 -5.169 32.022 21.850 1.00 27.72 O ATOM 111 C3' DT A 6 -6.411 32.522 20.055 1.00 31.42 C ATOM 112 O3' DT A 6 -7.333 33.433 19.533 1.00 37.05 O ATOM 113 C2' DT A 6 -5.022 32.884 19.614 1.00 29.01 C ATOM 114 C1' DT A 6 -4.314 32.112 20.644 1.00 25.64 C ATOM 115 N1 DT A 6 -4.021 30.736 20.237 1.00 21.93 N ATOM 116 C2 DT A 6 -2.921 30.633 19.468 1.00 21.36 C ATOM 117 O2 DT A 6 -2.255 31.582 19.073 1.00 22.44 O ATOM 118 N3 DT A 6 -2.562 29.388 19.158 1.00 20.30 N ATOM 119 C4 DT A 6 -3.237 28.299 19.576 1.00 18.95 C ATOM 120 O4 DT A 6 -2.726 27.245 19.247 1.00 21.04 O ATOM 121 C5 DT A 6 -4.392 28.469 20.375 1.00 16.78 C ATOM 122 C7 DT A 6 -5.203 27.284 20.791 1.00 16.92 C ATOM 123 C6 DT A 6 -4.746 29.664 20.675 1.00 18.50 C ATOM 124 P DG A 7 -8.296 32.740 18.371 1.00 38.57 P ATOM 125 OP1 DG A 7 -9.430 33.696 18.423 1.00 41.85 O ATOM 126 OP2 DG A 7 -8.544 31.296 18.691 1.00 39.70 O ATOM 127 O5' DG A 7 -7.464 32.801 17.001 1.00 37.03 O ATOM 128 C5' DG A 7 -6.870 33.968 16.475 1.00 35.02 C ATOM 129 C4' DG A 7 -5.654 33.755 15.506 1.00 34.33 C ATOM 130 O4' DG A 7 -4.537 33.127 16.149 1.00 33.85 O ATOM 131 C3' DG A 7 -6.022 32.885 14.338 1.00 34.14 C ATOM 132 O3' DG A 7 -6.655 33.748 13.394 1.00 35.44 O ATOM 133 C2' DG A 7 -4.601 32.595 13.919 1.00 32.86 C ATOM 134 C1' DG A 7 -3.900 32.247 15.227 1.00 30.67 C ATOM 135 N9 DG A 7 -4.110 30.794 15.646 1.00 25.68 N ATOM 136 C8 DG A 7 -5.042 30.195 16.506 1.00 23.73 C ATOM 137 N7 DG A 7 -4.888 28.903 16.662 1.00 20.83 N ATOM 138 C5 DG A 7 -3.772 28.665 15.843 1.00 20.67 C ATOM 139 C6 DG A 7 -3.150 27.449 15.581 1.00 20.22 C ATOM 140 O6 DG A 7 -3.403 26.407 16.170 1.00 19.36 O ATOM 141 N1 DG A 7 -2.103 27.564 14.651 1.00 19.40 N ATOM 142 C2 DG A 7 -1.722 28.726 14.077 1.00 19.11 C ATOM 143 N2 DG A 7 -0.748 28.692 13.258 1.00 19.61 N ATOM 144 N3 DG A 7 -2.275 29.865 14.315 1.00 21.47 N ATOM 145 C4 DG A 7 -3.303 29.773 15.214 1.00 21.79 C ATOM 146 P DC A 8 -7.758 33.346 12.348 1.00 35.07 P ATOM 147 OP1 DC A 8 -8.105 34.634 11.682 1.00 36.07 O ATOM 148 OP2 DC A 8 -8.775 32.478 12.956 1.00 32.32 O ATOM 149 O5' DC A 8 -6.901 32.468 11.352 1.00 30.19 O ATOM 150 C5' DC A 8 -5.967 33.114 10.589 1.00 28.91 C ATOM 151 C4' DC A 8 -5.149 32.076 9.897 1.00 30.36 C ATOM 152 O4' DC A 8 -4.588 31.175 10.858 1.00 30.32 O ATOM 153 C3' DC A 8 -5.963 31.236 8.958 1.00 30.74 C ATOM 154 O3' DC A 8 -5.189 31.196 7.790 1.00 34.48 O ATOM 155 C2' DC A 8 -5.937 29.887 9.630 1.00 30.18 C ATOM 156 C1' DC A 8 -4.687 29.832 10.495 1.00 27.99 C ATOM 157 N1 DC A 8 -5.038 28.958 11.591 1.00 25.32 N ATOM 158 C2 DC A 8 -4.327 27.780 11.702 1.00 23.91 C ATOM 159 O2 DC A 8 -3.330 27.581 11.002 1.00 21.28 O ATOM 160 N3 DC A 8 -4.749 26.873 12.657 1.00 22.00 N ATOM 161 C4 DC A 8 -5.786 27.174 13.410 1.00 20.95 C ATOM 162 N4 DC A 8 -6.147 26.273 14.267 1.00 21.40 N ATOM 163 C5 DC A 8 -6.502 28.371 13.320 1.00 20.99 C ATOM 164 C6 DC A 8 -6.090 29.229 12.394 1.00 22.68 C ATOM 165 P DC A 9 -5.637 30.463 6.410 1.00 34.54 P ATOM 166 OP1 DC A 9 -5.058 31.346 5.378 1.00 36.15 O ATOM 167 OP2 DC A 9 -7.080 30.220 6.462 1.00 34.43 O ATOM 168 O5' DC A 9 -4.894 29.028 6.368 1.00 33.99 O ATOM 169 C5' DC A 9 -3.499 28.915 6.316 1.00 32.25 C ATOM 170 C4' DC A 9 -3.155 27.477 6.279 1.00 31.99 C ATOM 171 O4' DC A 9 -3.528 26.771 7.442 1.00 29.66 O ATOM 172 C3' DC A 9 -3.951 26.806 5.178 1.00 33.37 C ATOM 173 O3' DC A 9 -3.062 25.973 4.488 1.00 38.06 O ATOM 174 C2' DC A 9 -4.950 25.909 5.897 1.00 32.67 C ATOM 175 C1' DC A 9 -4.176 25.523 7.119 1.00 28.91 C ATOM 176 N1 DC A 9 -5.069 25.215 8.196 1.00 26.10 N ATOM 177 C2 DC A 9 -4.995 23.986 8.832 1.00 24.20 C ATOM 178 O2 DC A 9 -4.243 23.132 8.391 1.00 21.61 O ATOM 179 N3 DC A 9 -5.774 23.771 9.957 1.00 24.66 N ATOM 180 C4 DC A 9 -6.590 24.759 10.401 1.00 24.10 C ATOM 181 N4 DC A 9 -7.367 24.610 11.460 1.00 24.10 N ATOM 182 C5 DC A 9 -6.652 26.025 9.729 1.00 25.34 C ATOM 183 C6 DC A 9 -5.879 26.206 8.634 1.00 25.39 C ATOM 184 P DT A 10 -2.722 26.413 3.002 1.00 54.11 P ATOM 185 OP1 DT A 10 -2.912 27.873 2.669 1.00 54.51 O ATOM 186 OP2 DT A 10 -3.372 25.376 2.124 1.00 54.35 O ATOM 187 O5' DT A 10 -1.038 26.298 2.925 1.00 52.08 O ATOM 188 C5' DT A 10 -0.246 27.428 3.319 1.00 49.81 C ATOM 189 C4' DT A 10 1.118 27.070 3.878 1.00 47.81 C ATOM 190 O4' DT A 10 0.964 25.841 4.595 1.00 45.96 O ATOM 191 C3' DT A 10 2.224 26.772 2.865 1.00 48.50 C ATOM 192 O3' DT A 10 3.456 27.124 3.560 1.00 50.90 O ATOM 193 C2' DT A 10 2.112 25.234 2.674 1.00 46.19 C ATOM 194 C1' DT A 10 1.862 24.834 4.091 1.00 42.95 C ATOM 195 N1 DT A 10 1.209 23.539 4.236 1.00 39.12 N ATOM 196 C2 DT A 10 2.059 22.453 4.421 1.00 37.81 C ATOM 197 O2 DT A 10 3.307 22.545 4.438 1.00 37.80 O ATOM 198 N3 DT A 10 1.397 21.266 4.579 1.00 36.22 N ATOM 199 C4 DT A 10 0.016 21.088 4.564 1.00 36.87 C ATOM 200 O4 DT A 10 -0.280 19.893 4.716 1.00 37.21 O ATOM 201 C5 DT A 10 -0.764 22.322 4.350 1.00 36.84 C ATOM 202 C7 DT A 10 -2.267 22.359 4.291 1.00 38.44 C ATOM 203 C6 DT A 10 -0.140 23.465 4.200 1.00 37.02 C TER 204 DT A 10 HETATM 205 O HOH A 11 4.426 20.089 22.284 1.00 57.30 O HETATM 206 O HOH A 12 -5.798 25.307 17.611 1.00 46.85 O HETATM 207 O HOH A 13 -2.732 15.611 21.189 1.00 46.10 O HETATM 208 O HOH A 14 -2.303 24.179 21.764 1.00 35.68 O HETATM 209 O HOH A 15 -7.560 37.723 10.819 1.00 41.04 O HETATM 210 O HOH A 16 -6.351 23.811 29.246 1.00 54.16 O HETATM 211 O HOH A 17 -0.515 33.530 16.472 1.00 51.89 O HETATM 212 O HOH A 18 -4.103 16.495 26.636 1.00 39.07 O HETATM 213 O HOH A 19 -9.609 36.494 16.126 1.00 35.79 O HETATM 214 O HOH A 20 -9.633 26.548 24.265 1.00 61.14 O HETATM 215 O HOH A 21 -7.526 22.108 26.573 1.00 58.35 O HETATM 216 O HOH A 22 -10.620 38.536 10.264 1.00 50.08 O HETATM 217 O HOH A 23 -4.380 15.593 24.094 1.00 62.41 O HETATM 218 O HOH A 24 -11.136 31.373 10.175 1.00 63.22 O HETATM 219 O HOH A 25 -12.654 30.998 16.398 1.00 64.78 O HETATM 220 O HOH A 26 -4.510 23.495 0.604 1.00 58.67 O HETATM 221 O HOH A 27 -8.425 28.514 4.131 1.00 61.44 O HETATM 222 O HOH A 28 -8.513 26.606 28.181 1.00 63.85 O HETATM 223 O HOH A 29 10.147 19.300 21.943 1.00 56.66 O HETATM 224 O HOH A 30 -11.396 34.753 19.831 1.00 56.35 O HETATM 225 O HOH A 31 -8.963 26.416 14.828 1.00 59.46 O HETATM 226 O HOH A 32 -7.539 25.660 22.202 1.00 58.50 O HETATM 227 O HOH A 33 -9.240 26.841 11.853 1.00 40.53 O HETATM 228 O HOH A 34 -9.568 31.819 30.682 1.00 71.22 O HETATM 229 O HOH A 35 6.676 14.938 17.714 1.00 58.89 O HETATM 230 O HOH A 36 -9.502 28.694 9.297 1.00 64.29 O HETATM 231 O HOH A 37 -10.288 29.192 16.054 1.00 61.23 O HETATM 232 O HOH A 38 -10.465 24.441 25.969 1.00 60.80 O HETATM 233 O HOH A 39 5.931 22.586 22.225 1.00 52.61 O HETATM 234 O HOH A 40 2.848 14.034 20.288 1.00 57.90 O HETATM 235 O HOH A 41 -9.001 28.047 20.154 1.00 48.30 O HETATM 236 O HOH A 42 7.233 20.012 21.613 1.00 66.07 O HETATM 237 O HOH A 43 -10.099 33.941 10.018 1.00 48.05 O HETATM 238 O HOH A 44 13.083 17.311 21.550 1.00 59.93 O HETATM 239 O HOH A 45 -13.115 34.618 14.177 1.00 60.56 O HETATM 240 O HOH A 46 -4.704 35.728 4.979 1.00 61.24 O HETATM 241 O HOH A 47 1.207 22.585 19.414 1.00 59.26 O HETATM 242 O HOH A 48 -2.777 35.251 16.587 1.00 58.06 O HETATM 243 O HOH A 49 -7.192 22.180 22.480 1.00 66.53 O HETATM 244 O HOH A 50 -11.936 32.687 7.357 1.00 62.55 O HETATM 245 O HOH A 51 -11.611 28.693 23.045 1.00 72.48 O HETATM 246 O HOH A 52 -6.661 33.523 5.142 1.00 69.32 O HETATM 247 O HOH A 53 -4.117 27.412 -0.228 1.00 61.57 O HETATM 248 O HOH A 54 -3.117 24.632 19.049 1.00 48.26 O HETATM 249 O HOH A 55 -10.080 36.440 12.931 1.00 69.87 O HETATM 250 O HOH A 56 -14.895 23.031 18.894 1.00 48.73 O HETATM 251 O HOH A 57 -3.258 21.848 22.734 1.00 53.04 O HETATM 252 O HOH A 58 -9.562 23.278 20.945 1.00 62.13 O HETATM 253 O HOH A 59 -6.947 27.628 18.413 1.00 53.65 O HETATM 254 O HOH A 60 -8.676 29.671 28.421 1.00 53.56 O HETATM 255 O HOH A 61 -10.623 26.294 9.325 1.00 42.84 O HETATM 256 O HOH A 62 -6.869 14.120 24.516 1.00 64.16 O HETATM 257 O HOH A 63 13.716 18.774 19.305 1.00 67.93 O HETATM 258 O HOH A 64 -9.361 30.011 11.589 1.00 48.06 O HETATM 259 O HOH A 65 -11.797 25.638 20.967 1.00 64.73 O HETATM 260 O HOH A 66 -0.228 18.539 20.996 1.00 58.87 O CONECT 49 64 CONECT 63 75 CONECT 64 49 65 66 67 CONECT 65 64 CONECT 66 64 CONECT 67 64 77 CONECT 68 69 70 80 CONECT 69 68 75 CONECT 70 68 71 72 CONECT 71 70 CONECT 72 70 73 CONECT 73 72 74 75 CONECT 74 73 CONECT 75 63 69 73 CONECT 76 80 81 CONECT 77 67 78 CONECT 78 77 79 81 CONECT 79 78 80 CONECT 80 68 76 79 CONECT 81 76 78 82 CONECT 82 81 83 CONECT 83 82 MASTER 327 0 1 0 0 0 0 6 259 1 22 1 END