PDB Short entry for 2AFB HEADER TRANSFERASE 25-JUL-05 2AFB TITLE CRYSTAL STRUCTURE OF 2-DEHYDRO-3- DEOXYGLUCONOKINASE (EC 2.7.1.45) TITLE 2 (TM0067) FROM THERMOTOGA MARITIMA AT 2.05 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-KETO-3-DEOXYGLUCONATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 GENE: TM0067; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TM0067, 2-DEHYDRO-3- DEOXYGLUCONOKINASE, PFKB FAMILY CARBOHYDRATE KEYWDS 2 KINASE, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 JCSG, PROTEIN STRUCTURE INITIATIVE, PSI, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 25-JAN-23 2AFB 1 REMARK SEQADV LINK REVDAT 6 11-OCT-17 2AFB 1 REMARK REVDAT 5 13-JUL-11 2AFB 1 VERSN REVDAT 4 24-FEB-09 2AFB 1 VERSN REVDAT 3 01-JAN-08 2AFB 1 JRNL REVDAT 2 28-FEB-06 2AFB 1 SPRSDE REVDAT 1 14-FEB-06 2AFB 0 SPRSDE 28-FEB-06 2AFB 1J5V JRNL AUTH I.I.MATHEWS,D.MCMULLAN,M.D.MILLER,J.M.CANAVES,M.A.ELSLIGER, JRNL AUTH 2 R.FLOYD,S.K.GRZECHNIK,L.JAROSZEWSKI,H.E.KLOCK,E.KOESEMA, JRNL AUTH 3 J.S.KOVARIK,A.KREUSCH,P.KUHN,T.M.MCPHILLIPS,A.T.MORSE, JRNL AUTH 4 K.QUIJANO,C.L.RIFE,R.SCHWARZENBACHER,G.SPRAGGON,R.C.STEVENS, JRNL AUTH 5 H.VAN DEN BEDEM,D.WEEKES,G.WOLF,K.O.HODGSON,J.WOOLEY, JRNL AUTH 6 A.M.DEACON,A.GODZIK,S.A.LESLEY,I.A.WILSON JRNL TITL CRYSTAL STRUCTURE OF 2-KETO-3-DEOXYGLUCONATE KINASE (TM0067) JRNL TITL 2 FROM THERMOTOGA MARITIMA AT 2.05 A RESOLUTION. JRNL REF PROTEINS V. 70 603 2007 JRNL REFN ISSN 0887-3585 JRNL PMID 18004772 JRNL DOI 10.1002/PROT.21842 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 44437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1069 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2836 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5040 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 394 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 27.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.74000 REMARK 3 B22 (A**2) : 0.74000 REMARK 3 B33 (A**2) : -1.12000 REMARK 3 B12 (A**2) : 0.37000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.179 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.167 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.753 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5153 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4686 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6981 ; 1.550 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10815 ; 0.835 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 651 ; 6.892 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 227 ;32.363 ;23.568 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 826 ;15.112 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;14.239 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 774 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5808 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1101 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1027 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4568 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2549 ; 0.183 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2969 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 281 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.306 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 35 ; 0.415 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 61 ; 0.350 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.348 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3351 ; 2.202 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1344 ; 0.708 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5178 ; 2.974 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2094 ; 5.306 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1803 ; 6.783 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 0 A 330 4 REMARK 3 1 B 0 B 330 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 4760 ; 0.310 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 4760 ; 1.060 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -4 A 331 REMARK 3 ORIGIN FOR THE GROUP (A): 82.5667 20.9921 2.6489 REMARK 3 T TENSOR REMARK 3 T11: -0.1058 T22: -0.0903 REMARK 3 T33: -0.0774 T12: 0.0124 REMARK 3 T13: 0.0103 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 0.8091 L22: 0.8784 REMARK 3 L33: 1.2827 L12: -0.2414 REMARK 3 L13: -0.1917 L23: 0.1852 REMARK 3 S TENSOR REMARK 3 S11: 0.0155 S12: 0.0941 S13: -0.0586 REMARK 3 S21: -0.1409 S22: 0.0760 S23: -0.1369 REMARK 3 S31: 0.1151 S32: 0.1508 S33: -0.0915 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 331 REMARK 3 ORIGIN FOR THE GROUP (A): 81.8449 49.7838 36.8975 REMARK 3 T TENSOR REMARK 3 T11: -0.0560 T22: -0.0244 REMARK 3 T33: -0.0381 T12: -0.0011 REMARK 3 T13: -0.0503 T23: -0.0970 REMARK 3 L TENSOR REMARK 3 L11: 0.6155 L22: 1.3082 REMARK 3 L33: 1.8851 L12: -0.0390 REMARK 3 L13: -0.0143 L23: 0.6421 REMARK 3 S TENSOR REMARK 3 S11: -0.0153 S12: -0.1516 S13: 0.1092 REMARK 3 S21: 0.2774 S22: 0.1984 S23: -0.2803 REMARK 3 S31: -0.0703 S32: 0.3453 S33: -0.1831 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. THE NI SITES REMARK 3 WERE ASSIGNED BASED ON ANOMALOUS PEAK HEIGHT, GEOMETRY, AND B- REMARK 3 FACTORS. REMARK 3 OTHER METALS COULD BE BOUND BUT NI IS MOST PROBABLE. THE REMARK 3 ASSIGNMENT OF CA SITES 7 AND 9 IS BASED ON GEOMETRY, B-FACTOR, AND REMARK 3 ANOMALOUS REMARK 3 DIFFERENCE FOURIER PEAK HEIGHT. CA SITE 8 AND 10 WERE ASSIGNED REMARK 3 BASED ON A SIMILAR ANOMALOUS PEAK HEIGHT AND B-FACTOR. SITE 8 REMARK 3 COULD ALSO REMARK 3 BE ANOTHER METAL (ZN OR NI) AT LOWER OCCUPANCY. MISSING RESIDUES REMARK 3 IN CHAIN A ARE 210-216 AND 332-339, WHILE MISSING RESIDUES IN REMARK 3 CHAIN B REMARK 3 ARE 211-216 AND 332-339 REMARK 4 REMARK 4 2AFB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033825. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979413, 0.904964, 0.979150 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45533 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 49.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : 0.07700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.38100 REMARK 200 R SYM FOR SHELL (I) : 0.38100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SNB, MLPHARE, CCP4, SOLVE, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50.0% PEG-200, 0.1M TRIS PH 7.0 , REMARK 280 VAPOR DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 60.49650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 34.92767 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 86.76667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 60.49650 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 34.92767 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 86.76667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 60.49650 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 34.92767 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 86.76667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 60.49650 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 34.92767 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 86.76667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 60.49650 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 34.92767 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 86.76667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 60.49650 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 34.92767 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 86.76667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 69.85534 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 173.53333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 69.85534 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 173.53333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 69.85534 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 173.53333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 69.85534 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 173.53333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 69.85534 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 173.53333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 69.85534 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 173.53333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 17170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 65600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -228.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 120.99300 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 60.49650 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 104.78301 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NI NI A 341 LIES ON A SPECIAL POSITION. REMARK 375 CA CA A 343 LIES ON A SPECIAL POSITION. REMARK 375 NI NI B 341 LIES ON A SPECIAL POSITION. REMARK 375 CA CA B 343 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 347 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 543 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 349 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 ASP A 210 REMARK 465 LEU A 211 REMARK 465 LYS A 212 REMARK 465 THR A 213 REMARK 465 GLY A 214 REMARK 465 LYS A 215 REMARK 465 LEU A 216 REMARK 465 ALA A 332 REMARK 465 THR A 333 REMARK 465 SER A 334 REMARK 465 GLY A 335 REMARK 465 ARG A 336 REMARK 465 VAL A 337 REMARK 465 GLU A 338 REMARK 465 ARG A 339 REMARK 465 MSE B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 LEU B 211 REMARK 465 LYS B 212 REMARK 465 THR B 213 REMARK 465 GLY B 214 REMARK 465 LYS B 215 REMARK 465 LEU B 216 REMARK 465 ALA B 332 REMARK 465 THR B 333 REMARK 465 SER B 334 REMARK 465 GLY B 335 REMARK 465 ARG B 336 REMARK 465 VAL B 337 REMARK 465 GLU B 338 REMARK 465 ARG B 339 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 114 CE NZ REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 LYS A 122 CD CE NZ REMARK 470 ARG A 170 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 186 CD OE1 OE2 REMARK 470 GLU A 196 CD OE1 OE2 REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 GLU A 207 CG CD OE1 OE2 REMARK 470 GLU A 219 CD OE1 OE2 REMARK 470 ILE A 224 CG1 CD1 REMARK 470 ARG A 230 CD NE CZ NH1 NH2 REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 LYS A 235 CD CE NZ REMARK 470 LYS B 114 CE NZ REMARK 470 LYS B 122 CD CE NZ REMARK 470 ARG B 128 CD NE CZ NH1 NH2 REMARK 470 LYS B 141 CG CD CE NZ REMARK 470 GLU B 175 CG CD OE1 OE2 REMARK 470 GLU B 176 CG CD OE1 OE2 REMARK 470 LYS B 179 CD CE NZ REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 470 GLU B 196 CD OE1 OE2 REMARK 470 GLU B 199 CG CD OE1 OE2 REMARK 470 LYS B 200 CG CD CE NZ REMARK 470 GLU B 207 CG CD OE1 OE2 REMARK 470 ASP B 210 CG OD1 REMARK 470 GLU B 219 CG CD OE1 OE2 REMARK 470 LYS B 231 CD CE NZ REMARK 470 LYS B 235 CD CE NZ REMARK 470 GLU B 323 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 25 CB - CG - OD1 ANGL. DEV. = 9.6 DEGREES REMARK 500 ARG B 84 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG B 84 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 95 -126.08 50.90 REMARK 500 ASN A 166 55.78 39.67 REMARK 500 THR B 53 -165.61 -167.50 REMARK 500 SER B 95 -121.86 50.28 REMARK 500 ASP B 104 59.79 -143.28 REMARK 500 ASP B 274 104.63 -164.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 344 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A -4 NE2 REMARK 620 2 HIS A -3 NE2 129.2 REMARK 620 3 GLU A 326 OE1 102.2 114.7 REMARK 620 4 GLU A 326 OE2 115.7 69.0 52.1 REMARK 620 5 HOH A 555 O 100.4 95.7 113.5 142.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 342 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 0 ND1 REMARK 620 2 ASP A 48 OD2 108.4 REMARK 620 3 HOH A 348 O 99.5 115.7 REMARK 620 4 HOH A 349 O 114.3 101.2 118.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 343 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 17 OD1 REMARK 620 2 ASP A 17 OD2 42.0 REMARK 620 3 ASP A 17 OD1 99.5 136.5 REMARK 620 4 ASP A 17 OD2 105.5 117.0 42.0 REMARK 620 5 ASP A 17 OD1 99.5 105.6 99.5 136.4 REMARK 620 6 ASP A 17 OD2 136.5 117.0 105.5 116.9 42.0 REMARK 620 7 HOH A 350 O 85.3 62.4 103.5 63.0 155.4 121.5 REMARK 620 8 HOH A 350 O 103.5 63.0 155.4 121.4 85.2 62.4 70.2 REMARK 620 9 HOH A 350 O 155.4 121.5 85.2 62.4 103.5 63.0 70.2 70.2 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 344 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 25 OD2 REMARK 620 2 ASP A 25 OD1 57.1 REMARK 620 3 HOH A 561 O 83.4 64.8 REMARK 620 4 ASP B 25 OD2 73.3 59.7 124.1 REMARK 620 5 ASP B 25 OD1 80.8 106.1 164.2 50.8 REMARK 620 6 HOH B 368 O 96.1 150.1 102.0 129.9 79.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 340 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 ND1 REMARK 620 2 HOH A 345 O 101.9 REMARK 620 3 HOH A 346 O 112.3 108.8 REMARK 620 4 HOH B 345 O 107.2 116.4 110.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 341 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 271 NE2 REMARK 620 2 HIS A 271 NE2 109.1 REMARK 620 3 HIS A 271 NE2 109.8 109.7 REMARK 620 4 HOH A 347 O 109.4 109.2 109.7 REMARK 620 5 HOH A 347 O 109.3 109.0 109.9 0.3 REMARK 620 6 HOH A 347 O 109.1 109.3 109.8 0.3 0.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 343 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 17 OD1 REMARK 620 2 ASP B 17 OD2 41.6 REMARK 620 3 ASP B 17 OD2 125.8 118.5 REMARK 620 4 ASP B 17 OD1 92.0 125.9 111.3 REMARK 620 5 ASP B 17 OD2 111.3 118.6 118.7 41.7 REMARK 620 6 ASP B 17 OD1 91.9 111.1 41.7 92.0 126.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 340 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 67 ND1 REMARK 620 2 HOH B 346 O 106.6 REMARK 620 3 HOH B 347 O 111.1 118.2 REMARK 620 4 HOH B 348 O 98.4 112.2 108.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 342 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 263 NE2 REMARK 620 2 HOH B 350 O 93.2 REMARK 620 3 HOH B 351 O 105.3 120.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 341 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 271 NE2 REMARK 620 2 HIS B 271 NE2 111.5 REMARK 620 3 HIS B 271 NE2 111.4 111.0 REMARK 620 4 HOH B 349 O 107.5 107.4 107.9 REMARK 620 5 HOH B 349 O 108.3 107.2 107.2 0.9 REMARK 620 6 HOH B 349 O 107.7 108.0 107.0 0.9 0.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 342 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 343 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 344 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 342 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 343 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 344 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 281948 RELATED DB: TARGETDB DBREF 2AFB A 1 339 GB 15642842 NP_227883 1 339 DBREF 2AFB B 1 339 GB 15642842 NP_227883 1 339 SEQADV 2AFB MSE A -11 GB 15642842 MODIFIED RESIDUE SEQADV 2AFB GLY A -10 GB 15642842 EXPRESSION TAG SEQADV 2AFB SER A -9 GB 15642842 EXPRESSION TAG SEQADV 2AFB ASP A -8 GB 15642842 EXPRESSION TAG SEQADV 2AFB LYS A -7 GB 15642842 EXPRESSION TAG SEQADV 2AFB ILE A -6 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS A -5 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS A -4 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS A -3 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS A -2 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS A -1 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS A 0 GB 15642842 EXPRESSION TAG SEQADV 2AFB MSE A 1 GB 15642842 MET 1 MODIFIED RESIDUE SEQADV 2AFB MSE A 10 GB 15642842 MET 10 MODIFIED RESIDUE SEQADV 2AFB MSE A 45 GB 15642842 MET 45 MODIFIED RESIDUE SEQADV 2AFB MSE A 181 GB 15642842 MET 181 MODIFIED RESIDUE SEQADV 2AFB MSE A 185 GB 15642842 MET 185 MODIFIED RESIDUE SEQADV 2AFB MSE A 255 GB 15642842 MET 255 MODIFIED RESIDUE SEQADV 2AFB MSE A 292 GB 15642842 MET 292 MODIFIED RESIDUE SEQADV 2AFB MSE B -11 GB 15642842 MODIFIED RESIDUE SEQADV 2AFB GLY B -10 GB 15642842 EXPRESSION TAG SEQADV 2AFB SER B -9 GB 15642842 EXPRESSION TAG SEQADV 2AFB ASP B -8 GB 15642842 EXPRESSION TAG SEQADV 2AFB LYS B -7 GB 15642842 EXPRESSION TAG SEQADV 2AFB ILE B -6 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS B -5 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS B -4 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS B -3 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS B -2 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS B -1 GB 15642842 EXPRESSION TAG SEQADV 2AFB HIS B 0 GB 15642842 EXPRESSION TAG SEQADV 2AFB MSE B 1 GB 15642842 MET 1 MODIFIED RESIDUE SEQADV 2AFB MSE B 10 GB 15642842 MET 10 MODIFIED RESIDUE SEQADV 2AFB MSE B 45 GB 15642842 MET 45 MODIFIED RESIDUE SEQADV 2AFB MSE B 181 GB 15642842 MET 181 MODIFIED RESIDUE SEQADV 2AFB MSE B 185 GB 15642842 MET 185 MODIFIED RESIDUE SEQADV 2AFB MSE B 255 GB 15642842 MET 255 MODIFIED RESIDUE SEQADV 2AFB MSE B 292 GB 15642842 MET 292 MODIFIED RESIDUE SEQRES 1 A 351 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 351 LYS VAL VAL THR PHE GLY GLU ILE MSE LEU ARG LEU SER SEQRES 3 A 351 PRO PRO ASP HIS LYS ARG ILE PHE GLN THR ASP SER PHE SEQRES 4 A 351 ASP VAL THR TYR GLY GLY ALA GLU ALA ASN VAL ALA ALA SEQRES 5 A 351 PHE LEU ALA GLN MSE GLY LEU ASP ALA TYR PHE VAL THR SEQRES 6 A 351 LYS LEU PRO ASN ASN PRO LEU GLY ASP ALA ALA ALA GLY SEQRES 7 A 351 HIS LEU ARG LYS PHE GLY VAL LYS THR ASP TYR ILE ALA SEQRES 8 A 351 ARG GLY GLY ASN ARG ILE GLY ILE TYR PHE LEU GLU ILE SEQRES 9 A 351 GLY ALA SER GLN ARG PRO SER LYS VAL VAL TYR ASP ARG SEQRES 10 A 351 ALA HIS SER ALA ILE SER GLU ALA LYS ARG GLU ASP PHE SEQRES 11 A 351 ASP TRP GLU LYS ILE LEU ASP GLY ALA ARG TRP PHE HIS SEQRES 12 A 351 PHE SER GLY ILE THR PRO PRO LEU GLY LYS GLU LEU PRO SEQRES 13 A 351 LEU ILE LEU GLU ASP ALA LEU LYS VAL ALA ASN GLU LYS SEQRES 14 A 351 GLY VAL THR VAL SER CYS ASP LEU ASN TYR ARG ALA ARG SEQRES 15 A 351 LEU TRP THR LYS GLU GLU ALA GLN LYS VAL MSE ILE PRO SEQRES 16 A 351 PHE MSE GLU TYR VAL ASP VAL LEU ILE ALA ASN GLU GLU SEQRES 17 A 351 ASP ILE GLU LYS VAL LEU GLY ILE SER VAL GLU GLY LEU SEQRES 18 A 351 ASP LEU LYS THR GLY LYS LEU ASN ARG GLU ALA TYR ALA SEQRES 19 A 351 LYS ILE ALA GLU GLU VAL THR ARG LYS TYR ASN PHE LYS SEQRES 20 A 351 THR VAL GLY ILE THR LEU ARG GLU SER ILE SER ALA THR SEQRES 21 A 351 VAL ASN TYR TRP SER VAL MSE VAL PHE GLU ASN GLY GLN SEQRES 22 A 351 PRO HIS PHE SER ASN ARG TYR GLU ILE HIS ILE VAL ASP SEQRES 23 A 351 ARG VAL GLY ALA GLY ASP SER PHE ALA GLY ALA LEU ILE SEQRES 24 A 351 TYR GLY SER LEU MSE GLY PHE ASP SER GLN LYS LYS ALA SEQRES 25 A 351 GLU PHE ALA ALA ALA ALA SER CYS LEU LYS HIS THR ILE SEQRES 26 A 351 PRO GLY ASP PHE VAL VAL LEU SER ILE GLU GLU ILE GLU SEQRES 27 A 351 LYS LEU ALA SER GLY ALA THR SER GLY ARG VAL GLU ARG SEQRES 1 B 351 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 B 351 LYS VAL VAL THR PHE GLY GLU ILE MSE LEU ARG LEU SER SEQRES 3 B 351 PRO PRO ASP HIS LYS ARG ILE PHE GLN THR ASP SER PHE SEQRES 4 B 351 ASP VAL THR TYR GLY GLY ALA GLU ALA ASN VAL ALA ALA SEQRES 5 B 351 PHE LEU ALA GLN MSE GLY LEU ASP ALA TYR PHE VAL THR SEQRES 6 B 351 LYS LEU PRO ASN ASN PRO LEU GLY ASP ALA ALA ALA GLY SEQRES 7 B 351 HIS LEU ARG LYS PHE GLY VAL LYS THR ASP TYR ILE ALA SEQRES 8 B 351 ARG GLY GLY ASN ARG ILE GLY ILE TYR PHE LEU GLU ILE SEQRES 9 B 351 GLY ALA SER GLN ARG PRO SER LYS VAL VAL TYR ASP ARG SEQRES 10 B 351 ALA HIS SER ALA ILE SER GLU ALA LYS ARG GLU ASP PHE SEQRES 11 B 351 ASP TRP GLU LYS ILE LEU ASP GLY ALA ARG TRP PHE HIS SEQRES 12 B 351 PHE SER GLY ILE THR PRO PRO LEU GLY LYS GLU LEU PRO SEQRES 13 B 351 LEU ILE LEU GLU ASP ALA LEU LYS VAL ALA ASN GLU LYS SEQRES 14 B 351 GLY VAL THR VAL SER CYS ASP LEU ASN TYR ARG ALA ARG SEQRES 15 B 351 LEU TRP THR LYS GLU GLU ALA GLN LYS VAL MSE ILE PRO SEQRES 16 B 351 PHE MSE GLU TYR VAL ASP VAL LEU ILE ALA ASN GLU GLU SEQRES 17 B 351 ASP ILE GLU LYS VAL LEU GLY ILE SER VAL GLU GLY LEU SEQRES 18 B 351 ASP LEU LYS THR GLY LYS LEU ASN ARG GLU ALA TYR ALA SEQRES 19 B 351 LYS ILE ALA GLU GLU VAL THR ARG LYS TYR ASN PHE LYS SEQRES 20 B 351 THR VAL GLY ILE THR LEU ARG GLU SER ILE SER ALA THR SEQRES 21 B 351 VAL ASN TYR TRP SER VAL MSE VAL PHE GLU ASN GLY GLN SEQRES 22 B 351 PRO HIS PHE SER ASN ARG TYR GLU ILE HIS ILE VAL ASP SEQRES 23 B 351 ARG VAL GLY ALA GLY ASP SER PHE ALA GLY ALA LEU ILE SEQRES 24 B 351 TYR GLY SER LEU MSE GLY PHE ASP SER GLN LYS LYS ALA SEQRES 25 B 351 GLU PHE ALA ALA ALA ALA SER CYS LEU LYS HIS THR ILE SEQRES 26 B 351 PRO GLY ASP PHE VAL VAL LEU SER ILE GLU GLU ILE GLU SEQRES 27 B 351 LYS LEU ALA SER GLY ALA THR SER GLY ARG VAL GLU ARG MODRES 2AFB MSE A 1 MET SELENOMETHIONINE MODRES 2AFB MSE A 10 MET SELENOMETHIONINE MODRES 2AFB MSE A 45 MET SELENOMETHIONINE MODRES 2AFB MSE A 181 MET SELENOMETHIONINE MODRES 2AFB MSE A 185 MET SELENOMETHIONINE MODRES 2AFB MSE A 255 MET SELENOMETHIONINE MODRES 2AFB MSE A 292 MET SELENOMETHIONINE MODRES 2AFB MSE B 1 MET SELENOMETHIONINE MODRES 2AFB MSE B 10 MET SELENOMETHIONINE MODRES 2AFB MSE B 45 MET SELENOMETHIONINE MODRES 2AFB MSE B 181 MET SELENOMETHIONINE MODRES 2AFB MSE B 185 MET SELENOMETHIONINE MODRES 2AFB MSE B 255 MET SELENOMETHIONINE MODRES 2AFB MSE B 292 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 10 8 HET MSE A 45 8 HET MSE A 181 8 HET MSE A 185 8 HET MSE A 255 8 HET MSE A 292 8 HET MSE B 1 8 HET MSE B 10 8 HET MSE B 45 8 HET MSE B 181 8 HET MSE B 185 8 HET MSE B 255 8 HET MSE B 292 8 HET NI A 340 1 HET NI A 341 1 HET NI A 342 1 HET CA A 343 1 HET CA A 344 1 HET NI B 340 1 HET NI B 341 1 HET NI B 342 1 HET CA B 343 1 HET CA B 344 1 HETNAM MSE SELENOMETHIONINE HETNAM NI NICKEL (II) ION HETNAM CA CALCIUM ION FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 NI 6(NI 2+) FORMUL 6 CA 4(CA 2+) FORMUL 13 HOH *394(H2 O) HELIX 1 1 ARG A 20 THR A 24 5 5 HELIX 2 2 GLY A 33 MSE A 45 1 13 HELIX 3 3 ASN A 58 PHE A 71 1 14 HELIX 4 4 LYS A 114 PHE A 118 5 5 HELIX 5 5 ASP A 119 LEU A 124 1 6 HELIX 6 6 THR A 136 GLY A 140 5 5 HELIX 7 7 GLU A 142 GLY A 158 1 17 HELIX 8 8 THR A 173 MSE A 185 1 13 HELIX 9 9 GLU A 186 VAL A 188 5 3 HELIX 10 10 ASN A 194 GLY A 203 1 10 HELIX 11 11 ASN A 217 ASN A 233 1 17 HELIX 12 12 GLY A 277 GLY A 293 1 17 HELIX 13 13 ASP A 295 HIS A 311 1 17 HELIX 14 14 SER A 321 SER A 330 1 10 HELIX 15 15 ARG B 20 THR B 24 5 5 HELIX 16 16 GLY B 33 MSE B 45 1 13 HELIX 17 17 ASN B 58 PHE B 71 1 14 HELIX 18 18 LYS B 114 PHE B 118 5 5 HELIX 19 19 ASP B 119 LEU B 124 1 6 HELIX 20 20 THR B 136 GLY B 140 5 5 HELIX 21 21 GLU B 142 GLY B 158 1 17 HELIX 22 22 THR B 173 GLU B 186 1 14 HELIX 23 23 ASN B 194 GLY B 203 1 10 HELIX 24 24 ASN B 217 ASN B 233 1 17 HELIX 25 25 GLY B 277 MSE B 292 1 16 HELIX 26 26 ASP B 295 HIS B 311 1 17 HELIX 27 27 SER B 321 SER B 330 1 10 SHEET 1 A 9 ILE A 78 ARG A 80 0 SHEET 2 A 9 ASP A 48 LEU A 55 1 N THR A 53 O ALA A 79 SHEET 3 A 9 LYS A 2 PHE A 6 1 N THR A 5 O VAL A 52 SHEET 4 A 9 ALA A 127 SER A 133 1 O ARG A 128 N LYS A 2 SHEET 5 A 9 THR A 160 ASP A 164 1 O SER A 162 N PHE A 130 SHEET 6 A 9 VAL A 190 ALA A 193 1 O ILE A 192 N CYS A 163 SHEET 7 A 9 THR A 236 GLU A 243 1 O GLY A 238 N LEU A 191 SHEET 8 A 9 VAL A 249 GLU A 258 -1 O PHE A 257 N VAL A 237 SHEET 9 A 9 GLN A 261 PHE A 264 -1 O HIS A 263 N VAL A 256 SHEET 1 B 9 ILE A 78 ARG A 80 0 SHEET 2 B 9 ASP A 48 LEU A 55 1 N THR A 53 O ALA A 79 SHEET 3 B 9 LYS A 2 PHE A 6 1 N THR A 5 O VAL A 52 SHEET 4 B 9 ALA A 127 SER A 133 1 O ARG A 128 N LYS A 2 SHEET 5 B 9 THR A 160 ASP A 164 1 O SER A 162 N PHE A 130 SHEET 6 B 9 VAL A 190 ALA A 193 1 O ILE A 192 N CYS A 163 SHEET 7 B 9 THR A 236 GLU A 243 1 O GLY A 238 N LEU A 191 SHEET 8 B 9 VAL A 249 GLU A 258 -1 O PHE A 257 N VAL A 237 SHEET 9 B 9 TYR A 268 HIS A 271 -1 O ILE A 270 N ASN A 250 SHEET 1 C 8 LYS A 100 ASP A 104 0 SHEET 2 C 8 ILE A 87 GLU A 91 -1 N GLU A 91 O LYS A 100 SHEET 3 C 8 MSE A 10 SER A 14 1 N LEU A 13 O TYR A 88 SHEET 4 C 8 SER A 26 GLY A 32 -1 O THR A 30 N ARG A 12 SHEET 5 C 8 SER B 26 GLY B 32 -1 O PHE B 27 N PHE A 27 SHEET 6 C 8 MSE B 10 SER B 14 -1 N ARG B 12 O THR B 30 SHEET 7 C 8 ILE B 87 GLU B 91 1 O LEU B 90 N LEU B 13 SHEET 8 C 8 LYS B 100 ASP B 104 -1 O ASP B 104 N ILE B 87 SHEET 1 D 9 ILE B 78 ARG B 80 0 SHEET 2 D 9 ASP B 48 LEU B 55 1 N THR B 53 O ALA B 79 SHEET 3 D 9 LYS B 2 PHE B 6 1 N THR B 5 O VAL B 52 SHEET 4 D 9 ALA B 127 SER B 133 1 O ARG B 128 N LYS B 2 SHEET 5 D 9 THR B 160 ASP B 164 1 O THR B 160 N PHE B 130 SHEET 6 D 9 VAL B 190 ALA B 193 1 O ILE B 192 N CYS B 163 SHEET 7 D 9 THR B 236 GLU B 243 1 O GLY B 238 N LEU B 191 SHEET 8 D 9 VAL B 249 GLU B 258 -1 O PHE B 257 N VAL B 237 SHEET 9 D 9 TYR B 268 HIS B 271 -1 O ILE B 270 N ASN B 250 LINK C HIS A 0 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C ILE A 9 N MSE A 10 1555 1555 1.33 LINK C MSE A 10 N LEU A 11 1555 1555 1.33 LINK C GLN A 44 N MSE A 45 1555 1555 1.33 LINK C MSE A 45 N GLY A 46 1555 1555 1.32 LINK C VAL A 180 N MSE A 181 1555 1555 1.32 LINK C MSE A 181 N ILE A 182 1555 1555 1.32 LINK C PHE A 184 N MSE A 185 1555 1555 1.33 LINK C MSE A 185 N GLU A 186 1555 1555 1.34 LINK C VAL A 254 N MSE A 255 1555 1555 1.34 LINK C MSE A 255 N VAL A 256 1555 1555 1.32 LINK C LEU A 291 N MSE A 292 1555 1555 1.32 LINK C MSE A 292 N GLY A 293 1555 1555 1.33 LINK C HIS B 0 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N LYS B 2 1555 1555 1.31 LINK C ILE B 9 N MSE B 10 1555 1555 1.33 LINK C MSE B 10 N LEU B 11 1555 1555 1.33 LINK C GLN B 44 N MSE B 45 1555 1555 1.33 LINK C MSE B 45 N GLY B 46 1555 1555 1.32 LINK C VAL B 180 N MSE B 181 1555 1555 1.34 LINK C MSE B 181 N ILE B 182 1555 1555 1.33 LINK C PHE B 184 N MSE B 185 1555 1555 1.33 LINK C MSE B 185 N GLU B 186 1555 1555 1.33 LINK C VAL B 254 N MSE B 255 1555 1555 1.33 LINK C MSE B 255 N VAL B 256 1555 1555 1.34 LINK C LEU B 291 N MSE B 292 1555 1555 1.34 LINK C MSE B 292 N GLY B 293 1555 1555 1.33 LINK NE2 HIS A -4 CA CA A 344 1555 1555 2.16 LINK NE2 HIS A -3 CA CA A 344 5555 1555 2.12 LINK ND1 HIS A 0 NI NI A 342 1555 1555 2.22 LINK OD1 ASP A 17 CA CA A 343 1555 1555 2.44 LINK OD2 ASP A 17 CA CA A 343 1555 1555 3.36 LINK OD1 ASP A 17 CA CA A 343 3665 1555 2.44 LINK OD2 ASP A 17 CA CA A 343 3665 1555 3.36 LINK OD1 ASP A 17 CA CA A 343 2655 1555 2.44 LINK OD2 ASP A 17 CA CA A 343 2655 1555 3.36 LINK OD2 ASP A 25 CA CA B 344 3665 1555 1.88 LINK OD1 ASP A 25 CA CA B 344 3665 1555 2.48 LINK OD2 ASP A 48 NI NI A 342 1555 1555 2.13 LINK ND1 HIS A 67 NI NI A 340 1555 1555 2.12 LINK NE2 HIS A 271 NI NI A 341 1555 1555 2.06 LINK NE2 HIS A 271 NI NI A 341 3665 1555 2.06 LINK NE2 HIS A 271 NI NI A 341 2655 1555 2.05 LINK OE1 GLU A 326 CA CA A 344 1555 1555 2.57 LINK OE2 GLU A 326 CA CA A 344 1555 1555 2.54 LINK NI NI A 340 O HOH A 345 1555 1555 2.64 LINK NI NI A 340 O HOH A 346 1555 1555 2.24 LINK NI NI A 340 O HOH B 345 1555 1555 2.33 LINK NI NI A 341 O HOH A 347 1555 1555 2.21 LINK NI NI A 341 O HOH A 347 1555 2655 2.21 LINK NI NI A 341 O HOH A 347 1555 3665 2.21 LINK NI NI A 342 O HOH A 348 1555 1555 2.44 LINK NI NI A 342 O HOH A 349 1555 1555 2.52 LINK CA CA A 343 O HOH A 350 1555 1555 2.63 LINK CA CA A 343 O HOH A 350 1555 2655 2.63 LINK CA CA A 343 O HOH A 350 1555 3665 2.63 LINK CA CA A 344 O HOH A 555 1555 1555 2.87 LINK O HOH A 561 CA CA B 344 3665 1555 2.24 LINK OD1 ASP B 17 CA CA B 343 1555 1555 2.66 LINK OD2 ASP B 17 CA CA B 343 1555 1555 3.34 LINK OD2 ASP B 17 CA CA B 343 3665 1555 3.33 LINK OD1 ASP B 17 CA CA B 343 2655 1555 2.65 LINK OD2 ASP B 17 CA CA B 343 2655 1555 3.33 LINK OD1 ASP B 17 CA CA B 343 3665 1555 2.66 LINK OD2 ASP B 25 CA CA B 344 1555 1555 2.88 LINK OD1 ASP B 25 CA CA B 344 1555 1555 1.73 LINK ND1 HIS B 67 NI NI B 340 1555 1555 2.02 LINK NE2 HIS B 263 NI NI B 342 1555 1555 2.21 LINK NE2 HIS B 271 NI NI B 341 1555 1555 2.05 LINK NE2 HIS B 271 NI NI B 341 3665 1555 2.06 LINK NE2 HIS B 271 NI NI B 341 2655 1555 2.06 LINK NI NI B 340 O HOH B 346 1555 1555 2.31 LINK NI NI B 340 O HOH B 347 1555 1555 2.19 LINK NI NI B 340 O HOH B 348 1555 1555 2.70 LINK NI NI B 341 O HOH B 349 1555 1555 2.33 LINK NI NI B 341 O HOH B 349 1555 3665 2.33 LINK NI NI B 341 O HOH B 349 1555 2655 2.33 LINK NI NI B 342 O HOH B 350 1555 1555 2.17 LINK NI NI B 342 O HOH B 351 1555 1555 2.76 LINK CA CA B 344 O HOH B 368 1555 1555 2.32 SITE 1 AC1 4 HIS A 67 HOH A 345 HOH A 346 HOH B 345 SITE 1 AC2 2 HIS A 271 HOH A 347 SITE 1 AC3 4 HIS A 0 ASP A 48 HOH A 348 HOH A 349 SITE 1 AC4 2 ASP A 17 HOH A 350 SITE 1 AC5 4 HIS A -3 HIS A -4 GLU A 326 HOH A 555 SITE 1 AC6 4 HIS B 67 HOH B 346 HOH B 347 HOH B 348 SITE 1 AC7 2 HIS B 271 HOH B 349 SITE 1 AC8 3 HIS B 263 HOH B 350 HOH B 351 SITE 1 AC9 1 ASP B 17 SITE 1 BC1 4 ASP A 25 HOH A 561 ASP B 25 HOH B 368 CRYST1 120.993 120.993 260.300 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008265 0.004772 0.000000 0.00000 SCALE2 0.000000 0.009544 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003842 0.00000