PDB Short entry for 2AJV HEADER IMMUNE SYSTEM 02-AUG-05 2AJV TITLE CRYSTAL STRUCTURE OF COCAINE CATALYTIC ANTIBODY 7A1 FAB' IN COMPLEX TITLE 2 WITH COCAINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY 7A1 FAB'; COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: IMMUNOGLOBULIN IGG1 KAPPA LIGHT CHAIN; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTIBODY 7A1 FAB'; COMPND 7 CHAIN: H; COMPND 8 FRAGMENT: IMMUNOGLOBULIN IGG1 HEAVY CHAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 STRAIN: MOUSE; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 8 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 9 ORGANISM_TAXID: 10090; SOURCE 10 STRAIN: MOUSE KEYWDS CATALYTIC ANTIBODY, FAB, COCAINE, HYDROLYTIC, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHU,I.A.WILSON REVDAT 3 23-AUG-23 2AJV 1 REMARK REVDAT 2 24-FEB-09 2AJV 1 VERSN REVDAT 1 14-FEB-06 2AJV 0 JRNL AUTH X.ZHU,T.J.DICKERSON,C.J.ROGERS,G.F.KAUFMANN,J.M.MEE, JRNL AUTH 2 K.M.MCKENZIE,K.D.JANDA,I.A.WILSON JRNL TITL COMPLETE REACTION CYCLE OF A COCAINE CATALYTIC ANTIBODY AT JRNL TITL 2 ATOMIC RESOLUTION. JRNL REF STRUCTURE V. 14 205 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 16472740 JRNL DOI 10.1016/J.STR.2005.10.014 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.9999 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 68409 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3661 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : 4897 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3373 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.91000 REMARK 3 B22 (A**2) : -0.30000 REMARK 3 B33 (A**2) : 1.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.094 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.515 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3536 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4833 ; 1.571 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 428 ; 6.880 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 139 ;33.825 ;23.813 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 571 ;13.038 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;17.914 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 560 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2609 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1628 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 392 ; 0.137 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 44 ; 0.170 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.195 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2233 ; 1.593 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3593 ; 2.452 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1499 ; 3.087 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1228 ; 4.363 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3732 ; 1.913 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 442 ; 6.085 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3438 ; 4.321 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AJV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000033980. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-SEP-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0688 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72094 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2AJS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM FORMATE, SODIUM REMARK 280 ACETATE, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.60850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.60850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.12700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.66000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.12700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.66000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.60850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.12700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 58.66000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 42.60850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.12700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 58.66000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 468 LIES ON A SPECIAL POSITION. REMARK 375 HOH H 470 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP L 7 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 CYS H 208 CA - CB - SG ANGL. DEV. = 7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET L 51 -38.12 68.63 REMARK 500 SER L 67 -138.36 -99.16 REMARK 500 SER H 15 -13.89 85.43 REMARK 500 ASN H 43 6.33 87.66 REMARK 500 SER H 54 -31.77 75.63 REMARK 500 LYS H 64 -133.05 51.27 REMARK 500 THR H 128 -143.85 -128.40 REMARK 500 LEU H 133 95.40 -49.96 REMARK 500 SER H 136 -123.62 -126.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COC L 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2AJS RELATED DB: PDB REMARK 900 SAME NATIVE PROTEIN IN COMPLEX WITH HEPTAETHYLENE GLYCOL REMARK 900 RELATED ID: 2AJU RELATED DB: PDB REMARK 900 SAME NATIVE PROTEIN IN APO FORM REMARK 900 RELATED ID: 2AJX RELATED DB: PDB REMARK 900 SAME NATIVE PROTEIN IN COMPLEX WITH TRANSITION STATE ANALOG REMARK 900 RELATED ID: 2AJY RELATED DB: PDB REMARK 900 SAME NATIVE PROTEIN IN COMPLEX WITH ECGONINE METHYL ESTER AND REMARK 900 BENZOIC ACID REMARK 900 RELATED ID: 2AJZ RELATED DB: PDB REMARK 900 SAME NATIVE PROTEIN IN COMPLEX WITH ECGONINE METHYL ESTER REMARK 900 RELATED ID: 2AK1 RELATED DB: PDB REMARK 900 SAME NATIVE PROTEIN IN COMPLEX WITH BENZOIC ACID REMARK 999 REMARK 999 SEQUENCE THE SEQUENCE OF THESE PROTEINS ARE NOT AVAILABLE AT ANY REMARK 999 SEQUENCE DATABASE AT THE TIME OF PROCESSING. DBREF 2AJV L 1 211 UNP Q5XKG4 Q5XKG4_MOUSE 16 231 DBREF 2AJV H 6 125 UNP A2NUE8 A2NUE8_MOUSE 24 149 SEQRES 1 L 216 ASP ILE VAL ILE THR GLN ASP GLU LEU SER ASN PRO VAL SEQRES 2 L 216 THR SER GLY GLU SER VAL SER ILE SER CYS ARG SER SER SEQRES 3 L 216 ARG SER LEU LEU TYR LYS ASP GLY ARG THR TYR LEU ASN SEQRES 4 L 216 TRP PHE LEU GLN ARG PRO GLY GLN SER PRO GLN LEU LEU SEQRES 5 L 216 ILE TYR LEU MET SER THR ARG ALA SER GLY VAL SER ASP SEQRES 6 L 216 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 L 216 GLU ILE SER ARG VAL LYS ALA GLU ASP VAL GLY VAL TYR SEQRES 8 L 216 TYR CYS GLN GLN PHE VAL GLU TYR PRO PHE THR PHE GLY SEQRES 9 L 216 SER GLY THR LYS LEU GLU ILE LYS ARG ALA ASP ALA ALA SEQRES 10 L 216 PRO THR VAL SER ILE PHE PRO PRO SER SER GLU GLN LEU SEQRES 11 L 216 THR SER GLY GLY ALA SER VAL VAL CYS PHE LEU ASN ASN SEQRES 12 L 216 PHE TYR PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE ASP SEQRES 13 L 216 GLY SER GLU ARG GLN ASN GLY VAL LEU ASN SER TRP THR SEQRES 14 L 216 ASP GLN ASP SER LYS ASP SER THR TYR SER MET SER SER SEQRES 15 L 216 THR LEU THR LEU THR LYS ASP GLU TYR GLU ARG HIS ASN SEQRES 16 L 216 SER TYR THR CYS GLU ALA THR HIS LYS THR SER THR SER SEQRES 17 L 216 PRO ILE VAL LYS SER PHE ASN ARG SEQRES 1 H 219 GLU VAL LYS LEU SER GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 219 PRO SER GLN SER LEU SER LEU THR CYS THR VAL THR GLY SEQRES 3 H 219 TYR SER ILE THR THR ASN TYR ALA TRP THR TRP ILE ARG SEQRES 4 H 219 GLN PHE PRO GLY ASN LYS LEU GLU TRP MET GLY TYR ILE SEQRES 5 H 219 ARG SER SER VAL ILE THR ARG TYR ASN PRO SER LEU LYS SEQRES 6 H 219 SER ARG ILE SER ILE THR GLN ASP THR SER LYS ASN GLN SEQRES 7 H 219 PHE PHE LEU GLN LEU ASN SER VAL THR THR GLU ASP THR SEQRES 8 H 219 ALA THR TYR TYR CYS ALA ARG TYR ASP TYR TYR GLY ASN SEQRES 9 H 219 THR GLY ASP TYR TRP GLY GLN GLY THR SER VAL THR VAL SEQRES 10 H 219 SER SER ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU SEQRES 11 H 219 ALA PRO GLY THR ALA ALA LEU LYS SER SER MET VAL THR SEQRES 12 H 219 LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL SEQRES 13 H 219 THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY VAL SEQRES 14 H 219 HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR SEQRES 15 H 219 LEU THR SER SER VAL THR VAL PRO SER SER THR TRP PRO SEQRES 16 H 219 SER GLN THR VAL THR CYS ASN VAL ALA HIS PRO ALA SER SEQRES 17 H 219 SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG HET COC L 501 22 HETNAM COC COCAINE FORMUL 3 COC C17 H21 N O4 FORMUL 4 HOH *440(H2 O) HELIX 1 1 LYS L 79 VAL L 83 5 5 HELIX 2 2 SER L 121 SER L 127 1 7 HELIX 3 3 LYS L 183 GLU L 187 1 5 HELIX 4 4 PRO H 61 LYS H 64 5 4 HELIX 5 5 THR H 73 LYS H 75 5 3 HELIX 6 6 THR H 83 THR H 87 5 5 HELIX 7 7 SER H 163 SER H 165 5 3 HELIX 8 8 PRO H 213 SER H 216 5 4 SHEET 1 A 4 ILE L 4 GLN L 6 0 SHEET 2 A 4 VAL L 19 SER L 25 -1 O ARG L 24 N THR L 5 SHEET 3 A 4 ASP L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 A 4 PHE L 62 GLY L 66 -1 N SER L 63 O GLU L 74 SHEET 1 B 2 VAL L 13 THR L 14 0 SHEET 2 B 2 ILE L 106 LYS L 107 1 O LYS L 107 N VAL L 13 SHEET 1 C 5 THR L 53 ARG L 54 0 SHEET 2 C 5 GLN L 45 TYR L 49 -1 N TYR L 49 O THR L 53 SHEET 3 C 5 LEU L 33 GLN L 38 -1 N TRP L 35 O LEU L 47 SHEET 4 C 5 GLY L 84 GLN L 90 -1 O VAL L 85 N GLN L 38 SHEET 5 C 5 THR L 102 LEU L 104 -1 O THR L 102 N TYR L 86 SHEET 1 D 4 THR L 114 PHE L 118 0 SHEET 2 D 4 GLY L 129 PHE L 139 -1 O ASN L 137 N THR L 114 SHEET 3 D 4 TYR L 173 THR L 182 -1 O MET L 175 N LEU L 136 SHEET 4 D 4 VAL L 159 TRP L 163 -1 N SER L 162 O SER L 176 SHEET 1 E 4 SER L 153 ARG L 155 0 SHEET 2 E 4 ASN L 145 ILE L 150 -1 N ILE L 150 O SER L 153 SHEET 3 E 4 SER L 191 THR L 197 -1 O THR L 197 N ASN L 145 SHEET 4 E 4 ILE L 205 ASN L 210 -1 O LYS L 207 N CYS L 194 SHEET 1 F 4 LYS H 3 SER H 7 0 SHEET 2 F 4 LEU H 18 THR H 25 -1 O THR H 23 N SER H 5 SHEET 3 F 4 GLN H 77 LEU H 82 -1 O PHE H 78 N CYS H 22 SHEET 4 F 4 ILE H 67 ASP H 72 -1 N THR H 70 O PHE H 79 SHEET 1 G 6 LEU H 11 VAL H 12 0 SHEET 2 G 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 G 6 ALA H 88 TYR H 95 -1 N ALA H 88 O VAL H 109 SHEET 4 G 6 ALA H 34 GLN H 39 -1 N ILE H 37 O TYR H 91 SHEET 5 G 6 LEU H 45 ARG H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 G 6 ILE H 56 TYR H 59 -1 O ILE H 56 N ARG H 52 SHEET 1 H 4 SER H 120 LEU H 124 0 SHEET 2 H 4 MET H 137 TYR H 147 -1 O LEU H 143 N TYR H 122 SHEET 3 H 4 LEU H 184 PRO H 194 -1 O LEU H 187 N VAL H 144 SHEET 4 H 4 VAL H 171 THR H 173 -1 N HIS H 172 O SER H 190 SHEET 1 I 4 SER H 120 LEU H 124 0 SHEET 2 I 4 MET H 137 TYR H 147 -1 O LEU H 143 N TYR H 122 SHEET 3 I 4 LEU H 184 PRO H 194 -1 O LEU H 187 N VAL H 144 SHEET 4 I 4 VAL H 177 GLN H 179 -1 N GLN H 179 O LEU H 184 SHEET 1 J 3 THR H 153 TRP H 157 0 SHEET 2 J 3 THR H 207 HIS H 212 -1 O ASN H 209 N THR H 156 SHEET 3 J 3 THR H 217 LYS H 222 -1 O THR H 217 N HIS H 212 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.02 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.13 SSBOND 4 CYS H 142 CYS H 208 1555 1555 2.01 CISPEP 1 TYR L 94 PRO L 95 0 -9.18 CISPEP 2 TYR L 140 PRO L 141 0 8.61 CISPEP 3 PHE H 148 PRO H 149 0 -5.96 CISPEP 4 GLU H 150 PRO H 151 0 -1.84 CISPEP 5 TRP H 200 PRO H 202 0 20.95 SITE 1 AC1 8 ALA H 34 TYR H 50 TYR H 97 TYR L 27D SITE 2 AC1 8 TYR L 32 PHE L 91 VAL L 92 PHE L 96 CRYST1 90.254 117.320 85.217 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011080 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008524 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011735 0.00000