PDB Short entry for 2BA9 HEADER ISOMERASE 14-OCT-05 2BA9 TITLE CRYSTAL STRUCTURE OF CLA-PRODUCING FATTY ACID ISOMERASE FROM P. ACNES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE AMINOOXIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FATTY ACID ISOMERASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PROPIONIBACTERIUM ACNES; SOURCE 3 ORGANISM_TAXID: 1747; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX 6-1 KEYWDS ISOMERASE, CONJUGATED LINOLEIC ACID, FAD EXPDTA X-RAY DIFFRACTION AUTHOR M.G.RUDOPLH,A.LIAVONCHANKA REVDAT 5 13-MAR-24 2BA9 1 REMARK LINK REVDAT 4 13-JUL-11 2BA9 1 VERSN REVDAT 3 24-FEB-09 2BA9 1 VERSN REVDAT 2 16-JAN-07 2BA9 1 JRNL REVDAT 1 31-JAN-06 2BA9 0 JRNL AUTH A.LIAVONCHANKA,E.HORNUNG,I.FEUSSNER,M.G.RUDOLPH JRNL TITL STRUCTURE AND MECHANISM OF THE PROPIONIBACTERIUM ACNES JRNL TITL 2 POLYUNSATURATED FATTY ACID ISOMERASE JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 2576 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16477020 JRNL DOI 10.1073/PNAS.0510144103 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0013 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 34437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1865 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2629 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE SET COUNT : 151 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3447 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 432 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.62000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 1.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.65000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.198 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.178 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.042 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3639 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2447 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4933 ; 1.228 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5920 ; 0.863 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 422 ; 6.396 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 191 ;37.442 ;23.874 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 573 ;13.824 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.318 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 499 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4050 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 769 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 829 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2771 ; 0.203 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1717 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1815 ; 0.080 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 343 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.176 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.138 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.265 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.223 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2103 ; 0.389 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 857 ; 0.089 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3391 ; 0.687 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1608 ; 1.238 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1542 ; 1.906 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 424 REMARK 3 ORIGIN FOR THE GROUP (A): -36.7400 -0.1580 -19.7180 REMARK 3 T TENSOR REMARK 3 T11: -0.0606 T22: -0.0855 REMARK 3 T33: -0.0653 T12: 0.0012 REMARK 3 T13: 0.0012 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.0113 L22: 0.3355 REMARK 3 L33: 0.5699 L12: 0.1220 REMARK 3 L13: 0.1427 L23: 0.0383 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: -0.1156 S13: 0.0315 REMARK 3 S21: 0.0392 S22: -0.0137 S23: 0.0170 REMARK 3 S31: -0.0374 S32: -0.0496 S33: 0.0067 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2BA9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1000034870. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37527 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 400, 0.02M HEPES, 0.1M REMARK 280 MAGNESIUM SULPHATE, 2.2M AMMONIUM SULPHATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.85350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.37950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.85350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.37950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2404 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 26 O HOH A 2434 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 32 65.37 -104.90 REMARK 500 THR A 123 -81.88 -122.09 REMARK 500 PHE A 165 -71.85 -113.45 REMARK 500 ASN A 175 -32.87 -135.15 REMARK 500 TYR A 184 -70.48 -80.93 REMARK 500 ASP A 233 18.50 57.71 REMARK 500 GLU A 290 80.74 61.48 REMARK 500 PHE A 371 67.41 39.52 REMARK 500 SER A 404 -96.02 -136.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A2001 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 183 O REMARK 620 2 GLU A 410 OE2 84.9 REMARK 620 3 HOH A2098 O 86.2 80.0 REMARK 620 4 HOH A2177 O 83.6 166.9 93.2 REMARK 620 5 HOH A2242 O 73.3 94.6 159.3 87.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 12P A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2B9W RELATED DB: PDB REMARK 900 RELATED ID: 2B9X RELATED DB: PDB REMARK 900 RELATED ID: 2B9Y RELATED DB: PDB REMARK 900 RELATED ID: 2BAB RELATED DB: PDB REMARK 900 RELATED ID: 2BAC RELATED DB: PDB DBREF 2BA9 A 1 424 GB 50842522 YP_055749 1 424 SEQRES 1 A 424 MET SER ILE SER LYS ASP SER ARG ILE ALA ILE ILE GLY SEQRES 2 A 424 ALA GLY PRO ALA GLY LEU ALA ALA GLY MET TYR LEU GLU SEQRES 3 A 424 GLN ALA GLY PHE HIS ASP TYR THR ILE LEU GLU ARG THR SEQRES 4 A 424 ASP HIS VAL GLY GLY LYS CYS HIS SER PRO ASN TYR HIS SEQRES 5 A 424 GLY ARG ARG TYR GLU MET GLY ALA ILE MET GLY VAL PRO SEQRES 6 A 424 SER TYR ASP THR ILE GLN GLU ILE MET ASP ARG THR GLY SEQRES 7 A 424 ASP LYS VAL ASP GLY PRO LYS LEU ARG ARG GLU PHE LEU SEQRES 8 A 424 HIS GLU ASP GLY GLU ILE TYR VAL PRO GLU LYS ASP PRO SEQRES 9 A 424 VAL ARG GLY PRO GLN VAL MET ALA ALA VAL GLN LYS LEU SEQRES 10 A 424 GLY GLN LEU LEU ALA THR LYS TYR GLN GLY TYR ASP ALA SEQRES 11 A 424 ASN GLY HIS TYR ASN LYS VAL HIS GLU ASP LEU MET LEU SEQRES 12 A 424 PRO PHE ASP GLU PHE LEU ALA LEU ASN GLY CYS GLU ALA SEQRES 13 A 424 ALA ARG ASP LEU TRP ILE ASN PRO PHE THR ALA PHE GLY SEQRES 14 A 424 TYR GLY HIS PHE ASP ASN VAL PRO ALA ALA TYR VAL LEU SEQRES 15 A 424 LYS TYR LEU ASP PHE VAL THR MET MET SER PHE ALA LYS SEQRES 16 A 424 GLY ASP LEU TRP THR TRP ALA ASP GLY THR GLN ALA MET SEQRES 17 A 424 PHE GLU HIS LEU ASN ALA THR LEU GLU HIS PRO ALA GLU SEQRES 18 A 424 ARG ASN VAL ASP ILE THR ARG ILE THR ARG GLU ASP GLY SEQRES 19 A 424 LYS VAL HIS ILE HIS THR THR ASP TRP ASP ARG GLU SER SEQRES 20 A 424 ASP VAL LEU VAL LEU THR VAL PRO LEU GLU LYS PHE LEU SEQRES 21 A 424 ASP TYR SER ASP ALA ASP ASP ASP GLU ARG GLU TYR PHE SEQRES 22 A 424 SER LYS ILE ILE HIS GLN GLN TYR MET VAL ASP ALA CYS SEQRES 23 A 424 LEU VAL LYS GLU TYR PRO THR ILE SER GLY TYR VAL PRO SEQRES 24 A 424 ASP ASN MET ARG PRO GLU ARG LEU GLY HIS VAL MET VAL SEQRES 25 A 424 TYR TYR HIS ARG TRP ALA ASP ASP PRO HIS GLN ILE ILE SEQRES 26 A 424 THR THR TYR LEU LEU ARG ASN HIS PRO ASP TYR ALA ASP SEQRES 27 A 424 LYS THR GLN GLU GLU CYS ARG GLN MET VAL LEU ASP ASP SEQRES 28 A 424 MET GLU THR PHE GLY HIS PRO VAL GLU LYS ILE ILE GLU SEQRES 29 A 424 GLU GLN THR TRP TYR TYR PHE PRO HIS VAL SER SER GLU SEQRES 30 A 424 ASP TYR LYS ALA GLY TRP TYR GLU LYS VAL GLU GLY MET SEQRES 31 A 424 GLN GLY ARG ARG ASN THR PHE TYR ALA GLY GLU ILE MET SEQRES 32 A 424 SER PHE GLY ASN PHE ASP GLU VAL CYS HIS TYR SER LYS SEQRES 33 A 424 ASP LEU VAL THR ARG PHE PHE VAL HET NA A2001 1 HET NA A2002 1 HET FAD A 500 53 HET 12P A1001 37 HETNAM NA SODIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM 12P DODECAETHYLENE GLYCOL HETSYN 12P POLYETHYLENE GLYCOL PEG400 FORMUL 2 NA 2(NA 1+) FORMUL 4 FAD C27 H33 N9 O15 P2 FORMUL 5 12P C24 H50 O13 FORMUL 6 HOH *432(H2 O) HELIX 1 1 GLY A 15 ALA A 28 1 14 HELIX 2 2 TYR A 67 GLY A 78 1 12 HELIX 3 3 VAL A 99 ASP A 103 5 5 HELIX 4 4 VAL A 105 THR A 123 1 19 HELIX 5 5 HIS A 138 LEU A 143 5 6 HELIX 6 6 PRO A 144 ASN A 152 1 9 HELIX 7 7 GLY A 153 ALA A 156 5 4 HELIX 8 8 ALA A 157 ILE A 162 1 6 HELIX 9 9 PRO A 177 LEU A 185 1 9 HELIX 10 10 ASP A 186 GLY A 196 1 11 HELIX 11 11 ASP A 203 LEU A 216 1 14 HELIX 12 12 PRO A 255 LEU A 260 1 6 HELIX 13 13 ASP A 261 SER A 263 5 3 HELIX 14 14 ASP A 266 SER A 274 1 9 HELIX 15 15 PRO A 299 LEU A 307 5 9 HELIX 16 16 THR A 340 GLY A 356 1 17 HELIX 17 17 SER A 375 ALA A 381 1 7 HELIX 18 18 GLY A 382 MET A 390 1 9 HELIX 19 19 GLY A 392 ARG A 394 5 3 HELIX 20 20 GLY A 400 SER A 404 5 5 HELIX 21 21 ASN A 407 PHE A 423 1 17 SHEET 1 A 4 TYR A 33 LEU A 36 0 SHEET 2 A 4 ILE A 9 ILE A 12 1 N ILE A 11 O THR A 34 SHEET 3 A 4 VAL A 249 LEU A 252 1 O VAL A 251 N ILE A 12 SHEET 4 A 4 THR A 396 TYR A 398 1 O PHE A 397 N LEU A 250 SHEET 1 B 2 ASN A 50 TYR A 51 0 SHEET 2 B 2 ARG A 54 ARG A 55 -1 O ARG A 54 N TYR A 51 SHEET 1 C 7 ILE A 97 TYR A 98 0 SHEET 2 C 7 ARG A 88 LEU A 91 -1 N PHE A 90 O TYR A 98 SHEET 3 C 7 SER A 295 TYR A 297 1 O TYR A 297 N LEU A 91 SHEET 4 C 7 VAL A 310 HIS A 315 -1 O TYR A 313 N GLY A 296 SHEET 5 C 7 ILE A 325 LEU A 330 -1 O TYR A 328 N MET A 311 SHEET 6 C 7 ILE A 277 VAL A 288 -1 N CYS A 286 O ILE A 325 SHEET 7 C 7 VAL A 359 HIS A 373 -1 O TYR A 370 N GLN A 279 SHEET 1 D 3 ILE A 226 THR A 230 0 SHEET 2 D 3 VAL A 236 THR A 240 -1 O HIS A 239 N ARG A 228 SHEET 3 D 3 ASP A 244 SER A 247 -1 O SER A 247 N VAL A 236 LINK O LYS A 183 NA NA A2001 1555 1555 2.51 LINK OE2 GLU A 410 NA NA A2001 1555 1555 2.33 LINK NA NA A2001 O HOH A2098 1555 1555 2.41 LINK NA NA A2001 O HOH A2177 1555 1555 2.13 LINK NA NA A2001 O HOH A2242 1555 1555 2.34 SITE 1 AC1 5 LYS A 183 GLU A 410 HOH A2098 HOH A2177 SITE 2 AC1 5 HOH A2242 SITE 1 AC2 2 LEU A 160 12P A1001 SITE 1 AC3 38 GLY A 13 GLY A 15 PRO A 16 ALA A 17 SITE 2 AC3 38 LEU A 36 GLU A 37 ARG A 38 THR A 39 SITE 3 AC3 38 GLY A 44 LYS A 45 CYS A 46 GLY A 59 SITE 4 AC3 38 ALA A 60 MET A 62 TYR A 67 PHE A 168 SITE 5 AC3 38 VAL A 254 TYR A 262 TYR A 281 VAL A 283 SITE 6 AC3 38 TRP A 368 TYR A 370 GLU A 401 GLY A 406 SITE 7 AC3 38 ASN A 407 PHE A 408 VAL A 411 12P A1001 SITE 8 AC3 38 HOH A2016 HOH A2024 HOH A2034 HOH A2071 SITE 9 AC3 38 HOH A2081 HOH A2087 HOH A2107 HOH A2131 SITE 10 AC3 38 HOH A2359 HOH A2392 SITE 1 AC4 18 ILE A 61 MET A 62 LEU A 86 PHE A 90 SITE 2 AC4 18 GLU A 101 VAL A 110 MET A 111 LEU A 160 SITE 3 AC4 18 ASN A 163 PHE A 168 ALA A 194 LEU A 198 SITE 4 AC4 18 TYR A 281 TYR A 297 VAL A 312 TYR A 328 SITE 5 AC4 18 FAD A 500 NA A2002 CRYST1 133.707 60.759 72.158 90.00 115.85 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007479 0.000000 0.003623 0.00000 SCALE2 0.000000 0.016458 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015399 0.00000