PDB Short entry for 2BAP HEADER SIGNALING PROTEIN 14-OCT-05 2BAP TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL MDIA1 ARMADILLO REPEAT REGION AND TITLE 2 DIMERISATION DOMAIN IN COMPLEX WITH THE MDIA1 AUTOREGULATORY DOMAIN TITLE 3 (DAD) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIAPHANOUS PROTEIN HOMOLOG 1; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: MDIA1 N-TERMINAL REGULATORY DOMAIN; COMPND 5 SYNONYM: DIAPHANOUS-RELATED FORMIN 1, DRF1, MDIA1, P140MDIA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DIAPHANOUS PROTEIN HOMOLOG 1; COMPND 9 CHAIN: D, C; COMPND 10 FRAGMENT: MDIA1 AUTOREGULATORY DOMAIN, DAD; COMPND 11 SYNONYM: DIAPHANOUS-RELATED FORMIN 1, DRF1, MDIA1, P140MDIA; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DIAPH1, DIAP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX4-T1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: DIAPH1, DIAP1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEX4-T1 KEYWDS ARMADILLO REPEATS, ALL HELICAL, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.LAMMERS,R.ROSE,A.SCRIMA,A.WITTINGHOFER REVDAT 4 23-AUG-23 2BAP 1 REMARK REVDAT 3 11-OCT-17 2BAP 1 REMARK REVDAT 2 24-FEB-09 2BAP 1 VERSN REVDAT 1 07-MAR-06 2BAP 0 JRNL AUTH M.LAMMERS,R.ROSE,A.SCRIMA,A.WITTINGHOFER JRNL TITL THE REGULATION OF MDIA1 BY AUTOINHIBITION AND ITS RELEASE BY JRNL TITL 2 RHO*GTP. JRNL REF EMBO J. V. 24 4176 2005 JRNL REFN ISSN 0261-4189 JRNL PMID 16292343 JRNL DOI 10.1038/SJ.EMBOJ.7600879 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.292 REMARK 3 R VALUE (WORKING SET) : 0.288 REMARK 3 FREE R VALUE : 0.364 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 925 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1231 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3730 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.4570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.650 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.621 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 38.004 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.901 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.839 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5031 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6770 ; 1.248 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 615 ; 5.907 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 247 ;43.413 ;25.020 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 983 ;20.364 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;19.459 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 781 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3708 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2619 ; 0.241 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3463 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 171 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 156 ; 0.219 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3192 ; 0.411 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4974 ; 0.718 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2018 ; 0.694 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1796 ; 1.132 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 135 B 435 4 REMARK 3 1 A 135 A 435 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 B (A): 2366 ; NULL ; NULL REMARK 3 MEDIUM THERMAL 1 B (A**2): 2366 ; NULL ; NULL REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : D C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 D 1180 D 1195 4 REMARK 3 1 C 1180 C 1195 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 D (A): 111 ; NULL ; NULL REMARK 3 MEDIUM THERMAL 2 D (A**2): 111 ; NULL ; NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2BAP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1000034884. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18490 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.14100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1Z2C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.7 M NAFORMIATE PH 7.1, 100 MM HEPES REMARK 280 PH 7.1, 4% (W/V) PEG5000-MME, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.29667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 140.59333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 105.44500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 175.74167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.14833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.29667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 140.59333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 175.74167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 105.44500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 35.14833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 -69.22500 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 -119.90122 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -35.14833 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -35.14833 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 194 REMARK 465 GLU B 195 REMARK 465 THR B 196 REMARK 465 SER B 197 REMARK 465 GLY B 198 REMARK 465 ASN B 199 REMARK 465 TYR B 200 REMARK 465 LYS B 436 REMARK 465 ASN B 437 REMARK 465 GLY B 438 REMARK 465 THR B 439 REMARK 465 ASP B 440 REMARK 465 PRO B 441 REMARK 465 ASP B 442 REMARK 465 PHE B 443 REMARK 465 LYS B 444 REMARK 465 CYS B 445 REMARK 465 ARG B 446 REMARK 465 HIS B 447 REMARK 465 LEU B 448 REMARK 465 GLN B 449 REMARK 465 ILE B 450 REMARK 465 ASP B 451 REMARK 465 GLU A 194 REMARK 465 GLU A 195 REMARK 465 THR A 196 REMARK 465 SER A 197 REMARK 465 GLY A 198 REMARK 465 ASN A 199 REMARK 465 LYS A 436 REMARK 465 ASN A 437 REMARK 465 GLY A 438 REMARK 465 THR A 439 REMARK 465 ASP A 440 REMARK 465 PRO A 441 REMARK 465 ASP A 442 REMARK 465 PHE A 443 REMARK 465 LYS A 444 REMARK 465 CYS A 445 REMARK 465 ARG A 446 REMARK 465 HIS A 447 REMARK 465 LEU A 448 REMARK 465 GLN A 449 REMARK 465 ILE A 450 REMARK 465 ASP A 451 REMARK 465 MET D 1145 REMARK 465 ARG D 1146 REMARK 465 ARG D 1147 REMARK 465 ALA D 1148 REMARK 465 LYS D 1149 REMARK 465 LEU D 1150 REMARK 465 ALA D 1151 REMARK 465 LYS D 1152 REMARK 465 GLU D 1153 REMARK 465 LYS D 1154 REMARK 465 ALA D 1155 REMARK 465 GLU D 1156 REMARK 465 LYS D 1157 REMARK 465 GLU D 1158 REMARK 465 ARG D 1159 REMARK 465 LEU D 1160 REMARK 465 GLU D 1161 REMARK 465 LYS D 1162 REMARK 465 GLN D 1163 REMARK 465 GLN D 1164 REMARK 465 LYS D 1165 REMARK 465 ARG D 1166 REMARK 465 GLU D 1167 REMARK 465 GLN D 1168 REMARK 465 LEU D 1169 REMARK 465 ILE D 1170 REMARK 465 ASP D 1171 REMARK 465 MET D 1172 REMARK 465 ASN D 1173 REMARK 465 ALA D 1174 REMARK 465 GLU D 1175 REMARK 465 GLY D 1176 REMARK 465 ASP D 1177 REMARK 465 GLU D 1178 REMARK 465 THR D 1179 REMARK 465 ARG D 1196 REMARK 465 ARG D 1197 REMARK 465 LYS D 1198 REMARK 465 ARG D 1199 REMARK 465 GLY D 1200 REMARK 465 MET C 1145 REMARK 465 ARG C 1146 REMARK 465 ARG C 1147 REMARK 465 ALA C 1148 REMARK 465 LYS C 1149 REMARK 465 LEU C 1150 REMARK 465 ALA C 1151 REMARK 465 LYS C 1152 REMARK 465 GLU C 1153 REMARK 465 LYS C 1154 REMARK 465 ALA C 1155 REMARK 465 GLU C 1156 REMARK 465 LYS C 1157 REMARK 465 GLU C 1158 REMARK 465 ARG C 1159 REMARK 465 LEU C 1160 REMARK 465 GLU C 1161 REMARK 465 LYS C 1162 REMARK 465 GLN C 1163 REMARK 465 GLN C 1164 REMARK 465 LYS C 1165 REMARK 465 ARG C 1166 REMARK 465 GLU C 1167 REMARK 465 GLN C 1168 REMARK 465 LEU C 1169 REMARK 465 ILE C 1170 REMARK 465 ASP C 1171 REMARK 465 MET C 1172 REMARK 465 ASN C 1173 REMARK 465 ALA C 1174 REMARK 465 GLU C 1175 REMARK 465 GLY C 1176 REMARK 465 ASP C 1177 REMARK 465 GLU C 1178 REMARK 465 THR C 1179 REMARK 465 ARG C 1196 REMARK 465 ARG C 1197 REMARK 465 LYS C 1198 REMARK 465 ARG C 1199 REMARK 465 GLY C 1200 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS A 400 OG SER A 403 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 435 C HIS A 435 O 0.403 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS A 435 CA - C - O ANGL. DEV. = -14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 145 23.60 -69.60 REMARK 500 LEU B 147 -157.51 -61.96 REMARK 500 ASP B 149 138.20 -39.13 REMARK 500 MET B 150 -69.08 78.39 REMARK 500 ASN B 217 35.98 -69.94 REMARK 500 MET B 239 103.79 -56.77 REMARK 500 PRO B 244 -70.49 -41.48 REMARK 500 GLN B 262 -61.43 -133.86 REMARK 500 MET B 280 -63.83 -25.09 REMARK 500 GLU B 282 75.56 -63.63 REMARK 500 LYS B 302 1.11 -67.89 REMARK 500 ILE B 313 -60.19 -95.17 REMARK 500 HIS B 324 -70.19 -61.40 REMARK 500 GLU B 345 38.09 -94.98 REMARK 500 ILE B 374 -6.21 -52.20 REMARK 500 ASP B 380 -31.24 -131.05 REMARK 500 PHE B 381 -44.38 83.79 REMARK 500 VAL B 411 101.95 -42.10 REMARK 500 LEU B 434 -71.61 -104.62 REMARK 500 SER A 145 41.01 -79.29 REMARK 500 MET A 150 -61.00 77.21 REMARK 500 ASN A 165 47.63 -93.11 REMARK 500 PRO A 167 -161.06 -77.08 REMARK 500 ASN A 217 62.29 -61.19 REMARK 500 ASN A 218 173.41 170.49 REMARK 500 LYS A 219 -83.80 -52.12 REMARK 500 PHE A 220 -58.67 -25.51 REMARK 500 GLU A 229 -76.45 -85.49 REMARK 500 ASP A 240 149.70 167.41 REMARK 500 PRO A 244 -58.87 -27.89 REMARK 500 LEU A 293 47.63 -143.95 REMARK 500 LYS A 294 -165.34 -118.71 REMARK 500 CYS A 305 -72.74 -72.05 REMARK 500 ILE A 313 -50.84 -144.75 REMARK 500 MET A 378 45.43 -74.88 REMARK 500 VAL A 392 40.29 -100.72 REMARK 500 ASP A 394 70.55 -117.47 REMARK 500 VAL A 411 102.00 -53.12 REMARK 500 LEU A 434 -64.75 -102.29 REMARK 500 MET D1182 3.31 -68.64 REMARK 500 ALA D1194 38.37 -78.59 REMARK 500 VAL C1181 -50.96 -123.05 REMARK 500 ALA C1188 34.37 -67.60 REMARK 500 LEU C1189 -53.06 -127.39 REMARK 500 ALA C1194 57.24 -93.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Z2C RELATED DB: PDB REMARK 900 MDIA1 GBD-FH3 IN COMPLEX WITH RHOC*GPPNHP REMARK 900 RELATED ID: 2BNX RELATED DB: PDB REMARK 900 SIMILAR N-TERMINAL CONSTRUCT WITHOUT DAD DBREF 2BAP B 135 451 UNP O08808 DIAP1_MOUSE 135 451 DBREF 2BAP A 135 451 UNP O08808 DIAP1_MOUSE 135 451 DBREF 2BAP D 1145 1200 UNP O08808 DIAP1_MOUSE 1145 1200 DBREF 2BAP C 1145 1200 UNP O08808 DIAP1_MOUSE 1145 1200 SEQRES 1 B 317 SER ALA MET MET TYR ILE GLN GLU LEU ARG SER GLY LEU SEQRES 2 B 317 ARG ASP MET HIS LEU LEU SER CYS LEU GLU SER LEU ARG SEQRES 3 B 317 VAL SER LEU ASN ASN ASN PRO VAL SER TRP VAL GLN THR SEQRES 4 B 317 PHE GLY ALA GLU GLY LEU ALA SER LEU LEU ASP ILE LEU SEQRES 5 B 317 LYS ARG LEU HIS ASP GLU LYS GLU GLU THR SER GLY ASN SEQRES 6 B 317 TYR ASP SER ARG ASN GLN HIS GLU ILE ILE ARG CYS LEU SEQRES 7 B 317 LYS ALA PHE MET ASN ASN LYS PHE GLY ILE LYS THR MET SEQRES 8 B 317 LEU GLU THR GLU GLU GLY ILE LEU LEU LEU VAL ARG ALA SEQRES 9 B 317 MET ASP PRO ALA VAL PRO ASN MET MET ILE ASP ALA ALA SEQRES 10 B 317 LYS LEU LEU SER ALA LEU CYS ILE LEU PRO GLN PRO GLU SEQRES 11 B 317 ASP MET ASN GLU ARG VAL LEU GLU ALA MET THR GLU ARG SEQRES 12 B 317 ALA GLU MET ASP GLU VAL GLU ARG PHE GLN PRO LEU LEU SEQRES 13 B 317 ASP GLY LEU LYS SER GLY THR SER ILE ALA LEU LYS VAL SEQRES 14 B 317 GLY CYS LEU GLN LEU ILE ASN ALA LEU ILE THR PRO ALA SEQRES 15 B 317 GLU GLU LEU ASP PHE ARG VAL HIS ILE ARG SER GLU LEU SEQRES 16 B 317 MET ARG LEU GLY LEU HIS GLN VAL LEU GLN GLU LEU ARG SEQRES 17 B 317 GLU ILE GLU ASN GLU ASP MET LYS VAL GLN LEU CYS VAL SEQRES 18 B 317 PHE ASP GLU GLN GLY ASP GLU ASP PHE PHE ASP LEU LYS SEQRES 19 B 317 GLY ARG LEU ASP ASP ILE ARG MET GLU MET ASP ASP PHE SEQRES 20 B 317 GLY GLU VAL PHE GLN ILE ILE LEU ASN THR VAL LYS ASP SEQRES 21 B 317 SER LYS ALA GLU PRO HIS PHE LEU SER ILE LEU GLN HIS SEQRES 22 B 317 LEU LEU LEU VAL ARG ASN ASP TYR GLU ALA ARG PRO GLN SEQRES 23 B 317 TYR TYR LYS LEU ILE GLU GLU CYS VAL SER GLN ILE VAL SEQRES 24 B 317 LEU HIS LYS ASN GLY THR ASP PRO ASP PHE LYS CYS ARG SEQRES 25 B 317 HIS LEU GLN ILE ASP SEQRES 1 A 317 SER ALA MET MET TYR ILE GLN GLU LEU ARG SER GLY LEU SEQRES 2 A 317 ARG ASP MET HIS LEU LEU SER CYS LEU GLU SER LEU ARG SEQRES 3 A 317 VAL SER LEU ASN ASN ASN PRO VAL SER TRP VAL GLN THR SEQRES 4 A 317 PHE GLY ALA GLU GLY LEU ALA SER LEU LEU ASP ILE LEU SEQRES 5 A 317 LYS ARG LEU HIS ASP GLU LYS GLU GLU THR SER GLY ASN SEQRES 6 A 317 TYR ASP SER ARG ASN GLN HIS GLU ILE ILE ARG CYS LEU SEQRES 7 A 317 LYS ALA PHE MET ASN ASN LYS PHE GLY ILE LYS THR MET SEQRES 8 A 317 LEU GLU THR GLU GLU GLY ILE LEU LEU LEU VAL ARG ALA SEQRES 9 A 317 MET ASP PRO ALA VAL PRO ASN MET MET ILE ASP ALA ALA SEQRES 10 A 317 LYS LEU LEU SER ALA LEU CYS ILE LEU PRO GLN PRO GLU SEQRES 11 A 317 ASP MET ASN GLU ARG VAL LEU GLU ALA MET THR GLU ARG SEQRES 12 A 317 ALA GLU MET ASP GLU VAL GLU ARG PHE GLN PRO LEU LEU SEQRES 13 A 317 ASP GLY LEU LYS SER GLY THR SER ILE ALA LEU LYS VAL SEQRES 14 A 317 GLY CYS LEU GLN LEU ILE ASN ALA LEU ILE THR PRO ALA SEQRES 15 A 317 GLU GLU LEU ASP PHE ARG VAL HIS ILE ARG SER GLU LEU SEQRES 16 A 317 MET ARG LEU GLY LEU HIS GLN VAL LEU GLN GLU LEU ARG SEQRES 17 A 317 GLU ILE GLU ASN GLU ASP MET LYS VAL GLN LEU CYS VAL SEQRES 18 A 317 PHE ASP GLU GLN GLY ASP GLU ASP PHE PHE ASP LEU LYS SEQRES 19 A 317 GLY ARG LEU ASP ASP ILE ARG MET GLU MET ASP ASP PHE SEQRES 20 A 317 GLY GLU VAL PHE GLN ILE ILE LEU ASN THR VAL LYS ASP SEQRES 21 A 317 SER LYS ALA GLU PRO HIS PHE LEU SER ILE LEU GLN HIS SEQRES 22 A 317 LEU LEU LEU VAL ARG ASN ASP TYR GLU ALA ARG PRO GLN SEQRES 23 A 317 TYR TYR LYS LEU ILE GLU GLU CYS VAL SER GLN ILE VAL SEQRES 24 A 317 LEU HIS LYS ASN GLY THR ASP PRO ASP PHE LYS CYS ARG SEQRES 25 A 317 HIS LEU GLN ILE ASP SEQRES 1 D 56 MET ARG ARG ALA LYS LEU ALA LYS GLU LYS ALA GLU LYS SEQRES 2 D 56 GLU ARG LEU GLU LYS GLN GLN LYS ARG GLU GLN LEU ILE SEQRES 3 D 56 ASP MET ASN ALA GLU GLY ASP GLU THR GLY VAL MET ASP SEQRES 4 D 56 SER LEU LEU GLU ALA LEU GLN SER GLY ALA ALA PHE ARG SEQRES 5 D 56 ARG LYS ARG GLY SEQRES 1 C 56 MET ARG ARG ALA LYS LEU ALA LYS GLU LYS ALA GLU LYS SEQRES 2 C 56 GLU ARG LEU GLU LYS GLN GLN LYS ARG GLU GLN LEU ILE SEQRES 3 C 56 ASP MET ASN ALA GLU GLY ASP GLU THR GLY VAL MET ASP SEQRES 4 C 56 SER LEU LEU GLU ALA LEU GLN SER GLY ALA ALA PHE ARG SEQRES 5 C 56 ARG LYS ARG GLY HELIX 1 1 ALA B 136 SER B 145 1 10 HELIX 2 2 MET B 150 ASN B 166 1 17 HELIX 3 3 PRO B 167 LYS B 193 1 27 HELIX 4 4 SER B 202 MET B 216 1 15 HELIX 5 5 ASN B 218 LEU B 226 1 9 HELIX 6 6 GLU B 230 ARG B 237 1 8 HELIX 7 7 VAL B 243 LEU B 260 1 18 HELIX 8 8 ASP B 265 ASP B 281 1 17 HELIX 9 9 PHE B 286 GLY B 292 1 7 HELIX 10 10 LEU B 301 THR B 314 1 14 HELIX 11 11 GLU B 318 ARG B 331 1 14 HELIX 12 12 GLY B 333 GLN B 339 1 7 HELIX 13 13 GLN B 339 ILE B 344 1 6 HELIX 14 14 ASN B 346 GLU B 377 1 32 HELIX 15 15 PHE B 381 VAL B 392 1 12 HELIX 16 16 ALA B 397 LEU B 409 1 13 HELIX 17 17 ALA B 417 LEU B 434 1 18 HELIX 18 18 ALA A 136 SER A 145 1 10 HELIX 19 19 MET A 150 ASN A 165 1 16 HELIX 20 20 VAL A 168 GLU A 192 1 25 HELIX 21 21 ASP A 201 ASN A 217 1 17 HELIX 22 22 ASN A 218 THR A 228 1 11 HELIX 23 23 GLU A 230 MET A 239 1 10 HELIX 24 24 VAL A 243 ILE A 259 1 17 HELIX 25 25 ASP A 265 ASP A 281 1 17 HELIX 26 26 PHE A 286 GLY A 292 1 7 HELIX 27 27 SER A 298 LEU A 312 1 15 HELIX 28 28 GLU A 318 LEU A 332 1 15 HELIX 29 29 GLY A 333 LEU A 338 1 6 HELIX 30 30 GLN A 339 ILE A 344 1 6 HELIX 31 31 ASP A 348 VAL A 351 5 4 HELIX 32 32 GLN A 352 MET A 378 1 27 HELIX 33 33 ASP A 380 VAL A 392 1 13 HELIX 34 34 ALA A 397 LEU A 409 1 13 HELIX 35 35 ALA A 417 LEU A 434 1 18 HELIX 36 36 VAL D 1181 SER D 1191 1 11 HELIX 37 37 ASP C 1183 SER C 1191 1 9 CRYST1 138.450 138.450 210.890 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007220 0.004170 0.000000 0.00000 SCALE2 0.000000 0.008340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004740 0.00000