PDB Short entry for 2BU1 HEADER VIRUS/RNA 08-JUN-05 2BU1 TITLE MS2-RNA HAIRPIN (5BRU -5) COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MS2 COAT PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP COMPND 7 *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3'; COMPND 8 CHAIN: R, S; COMPND 9 FRAGMENT: COAT PROTEIN-BINDING HAIRPIN, RESIDUES 2-18; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE MS2; SOURCE 3 ORGANISM_TAXID: 12022; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: BACTERIOPHAGE MS2; SOURCE 9 ORGANISM_TAXID: 12022 KEYWDS VIRUS/RNA, COMPLEX (CAPSID PROTEIN-RNA HAIRPIN), HAIRPIN, CAPSID, KEYWDS 2 LEVIVIRUS, CAPSID PROTEIN, RNA-BINDING, STRUCTURAL PROTEIN, KEYWDS 3 ICOSAHEDRAL VIRUS, VIRUS-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS,H.LAGO, AUTHOR 2 N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS REVDAT 4 09-OCT-19 2BU1 1 JRNL LINK REVDAT 3 24-FEB-09 2BU1 1 VERSN REVDAT 2 18-NOV-05 2BU1 1 COMPND REMARK DBREF SEQRES REVDAT 2 2 1 MODRES CRYST1 SCALE3 CONECT REVDAT 2 3 1 SPRSDE REVDAT 1 18-AUG-05 2BU1 0 SPRSDE 18-NOV-05 2BU1 1E6T JRNL AUTH E.GRAHN,T.MOSS,C.HELGSTRAND,K.FRIDBORG,M.SUNDARAM,K.TARS, JRNL AUTH 2 H.LAGO,N.J.STONEHOUSE,D.R.DAVIS,P.G.STOCKLEY,L.LILJAS JRNL TITL STRUCTURAL BASIS OF PYRIMIDINE SPECIFICITY IN THE MS2 RNA JRNL TITL 2 HAIRPIN-COAT-PROTEIN COMPLEX. JRNL REF RNA V. 7 1616 2001 JRNL REFN ISSN 1355-8382 JRNL PMID 11720290 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.5 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 71.2 REMARK 3 NUMBER OF REFLECTIONS : 372421 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 0.100 REMARK 3 FREE R VALUE TEST SET COUNT : 394 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.012 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.40 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 12.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3309 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 0.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 4 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.182 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2895 REMARK 3 NUCLEIC ACID ATOMS : 728 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 205 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.34 REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.29 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.100 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 36.92 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA-5BR_MULT.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA-5BR.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2BU1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUN-05. REMARK 100 THE DEPOSITION ID IS D_1290024401. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-98 REMARK 200 TEMPERATURE (KELVIN) : 287 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.870 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 374908 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 69.0 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 13.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.10 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: MS2 RECOMBINANT CAPSIDS REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 144.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 83.13844 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 217.66667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 144.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 83.13844 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 217.66667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 144.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 83.13844 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 217.66667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 144.00000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 83.13844 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 217.66667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 144.00000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 83.13844 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 217.66667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 144.00000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 83.13844 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 217.66667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 166.27688 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 435.33333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 166.27688 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 435.33333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 166.27688 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 435.33333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 166.27688 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 435.33333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 166.27688 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 435.33333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 166.27688 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 435.33333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, R, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.809017 0.110264 -0.577350 0.00000 REMARK 350 BIOMT2 2 0.467086 0.475684 0.745356 0.00000 REMARK 350 BIOMT3 2 0.356822 -0.872678 0.333333 0.00000 REMARK 350 BIOMT1 3 0.500000 0.645497 -0.577350 0.00000 REMARK 350 BIOMT2 3 0.866025 -0.372678 0.333333 0.00000 REMARK 350 BIOMT3 3 0.000000 -0.666667 -0.745356 0.00000 REMARK 350 BIOMT1 4 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.645497 -0.372678 -0.666667 0.00000 REMARK 350 BIOMT3 4 -0.577350 0.333333 -0.745356 0.00000 REMARK 350 BIOMT1 5 0.809017 0.467086 0.356822 0.00000 REMARK 350 BIOMT2 5 0.110264 0.475684 -0.872678 0.00000 REMARK 350 BIOMT3 5 -0.577350 0.745356 0.333333 0.00000 REMARK 350 BIOMT1 6 0.309017 0.755761 0.577350 0.00000 REMARK 350 BIOMT2 6 0.755761 -0.563661 0.333333 0.00000 REMARK 350 BIOMT3 6 0.577350 0.333333 -0.745356 0.00000 REMARK 350 BIOMT1 7 0.809017 -0.110264 0.577350 0.00000 REMARK 350 BIOMT2 7 0.467086 -0.475684 -0.745356 0.00000 REMARK 350 BIOMT3 7 0.356822 0.872678 -0.333333 0.00000 REMARK 350 BIOMT1 8 0.809017 -0.467086 -0.356822 0.00000 REMARK 350 BIOMT2 8 -0.110264 0.475684 -0.872678 0.00000 REMARK 350 BIOMT3 8 0.577350 0.745356 0.333333 0.00000 REMARK 350 BIOMT1 9 0.309017 0.178411 -0.934172 0.00000 REMARK 350 BIOMT2 9 -0.178411 0.975684 0.127322 0.00000 REMARK 350 BIOMT3 9 0.934172 0.127322 0.333333 0.00000 REMARK 350 BIOMT1 10 0.000000 0.934172 -0.356822 0.00000 REMARK 350 BIOMT2 10 0.356822 0.333333 0.872678 0.00000 REMARK 350 BIOMT3 10 0.934172 -0.127322 -0.333333 0.00000 REMARK 350 BIOMT1 11 -0.809017 0.110264 -0.577350 0.00000 REMARK 350 BIOMT2 11 0.110264 -0.936339 -0.333333 0.00000 REMARK 350 BIOMT3 11 -0.577350 -0.333333 0.745356 0.00000 REMARK 350 BIOMT1 12 -0.809017 0.467086 0.356822 0.00000 REMARK 350 BIOMT2 12 -0.467086 -0.142350 -0.872678 0.00000 REMARK 350 BIOMT3 12 -0.356822 -0.872678 0.333333 0.00000 REMARK 350 BIOMT1 13 -0.309017 -0.178411 0.934172 0.00000 REMARK 350 BIOMT2 13 -0.755761 0.642350 -0.127322 0.00000 REMARK 350 BIOMT3 13 -0.577350 -0.745356 -0.333333 0.00000 REMARK 350 BIOMT1 14 0.000000 -0.934172 0.356822 0.00000 REMARK 350 BIOMT2 14 -0.356822 0.333333 0.872678 0.00000 REMARK 350 BIOMT3 14 -0.934172 -0.127322 -0.333333 0.00000 REMARK 350 BIOMT1 15 -0.309017 -0.755761 -0.577350 0.00000 REMARK 350 BIOMT2 15 0.178411 -0.642350 0.745356 0.00000 REMARK 350 BIOMT3 15 -0.934172 0.127322 0.333333 0.00000 REMARK 350 BIOMT1 16 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 16 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 -0.809017 -0.467086 -0.356822 0.00000 REMARK 350 BIOMT2 17 -0.467086 0.142350 0.872678 0.00000 REMARK 350 BIOMT3 17 -0.356822 0.872678 -0.333333 0.00000 REMARK 350 BIOMT1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 18 0.000000 -0.745356 0.666667 0.00000 REMARK 350 BIOMT3 18 0.000000 0.666667 0.745356 0.00000 REMARK 350 BIOMT1 19 -0.809017 -0.110264 0.577350 0.00000 REMARK 350 BIOMT2 19 -0.110264 -0.936339 -0.333333 0.00000 REMARK 350 BIOMT3 19 0.577350 -0.333333 0.745356 0.00000 REMARK 350 BIOMT1 20 -0.500000 -0.645497 0.577350 0.00000 REMARK 350 BIOMT2 20 -0.645497 -0.166667 -0.745356 0.00000 REMARK 350 BIOMT3 20 0.577350 -0.745356 -0.333333 0.00000 REMARK 350 BIOMT1 21 -0.309017 0.178411 -0.934172 0.00000 REMARK 350 BIOMT2 21 0.755761 0.642350 -0.127322 0.00000 REMARK 350 BIOMT3 21 0.577350 -0.745356 -0.333333 0.00000 REMARK 350 BIOMT1 22 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 22 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 22 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 23 0.000000 0.356822 0.934172 0.00000 REMARK 350 BIOMT2 23 0.934172 0.333333 -0.127322 0.00000 REMARK 350 BIOMT3 23 -0.356822 0.872678 -0.333333 0.00000 REMARK 350 BIOMT1 24 0.500000 -0.645497 0.577350 0.00000 REMARK 350 BIOMT2 24 0.866025 0.372678 -0.333333 0.00000 REMARK 350 BIOMT3 24 0.000000 0.666667 0.745356 0.00000 REMARK 350 BIOMT1 25 0.309017 -0.755761 -0.577350 0.00000 REMARK 350 BIOMT2 25 0.755761 0.563661 -0.333333 0.00000 REMARK 350 BIOMT3 25 0.577350 -0.333333 0.745356 0.00000 REMARK 350 BIOMT1 26 -0.500000 -0.645497 0.577350 0.00000 REMARK 350 BIOMT2 26 0.645497 0.166667 0.745356 0.00000 REMARK 350 BIOMT3 26 -0.577350 0.745356 0.333333 0.00000 REMARK 350 BIOMT1 27 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 27 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 27 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 28 -0.809017 -0.467086 -0.356822 0.00000 REMARK 350 BIOMT2 28 0.467086 -0.142350 -0.872678 0.00000 REMARK 350 BIOMT3 28 0.356822 -0.872678 0.333333 0.00000 REMARK 350 BIOMT1 29 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 29 0.000000 0.745356 -0.666667 0.00000 REMARK 350 BIOMT3 29 0.000000 -0.666667 -0.745356 0.00000 REMARK 350 BIOMT1 30 -0.809017 -0.110264 0.577350 0.00000 REMARK 350 BIOMT2 30 0.110264 0.936339 0.333333 0.00000 REMARK 350 BIOMT3 30 -0.577350 0.333333 -0.745356 0.00000 REMARK 350 BIOMT1 31 0.809017 0.110264 -0.577350 0.00000 REMARK 350 BIOMT2 31 -0.467086 -0.475684 -0.745356 0.00000 REMARK 350 BIOMT3 31 -0.356822 0.872678 -0.333333 0.00000 REMARK 350 BIOMT1 32 0.500000 0.645497 -0.577350 0.00000 REMARK 350 BIOMT2 32 -0.866025 0.372678 -0.333333 0.00000 REMARK 350 BIOMT3 32 0.000000 0.666667 0.745356 0.00000 REMARK 350 BIOMT1 33 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 33 -0.645497 0.372678 0.666667 0.00000 REMARK 350 BIOMT3 33 0.577350 -0.333333 0.745356 0.00000 REMARK 350 BIOMT1 34 0.809017 0.467086 0.356822 0.00000 REMARK 350 BIOMT2 34 -0.110264 -0.475684 0.872678 0.00000 REMARK 350 BIOMT3 34 0.577350 -0.745356 -0.333333 0.00000 REMARK 350 BIOMT1 35 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 35 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 35 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 36 0.000000 0.356822 0.934172 0.00000 REMARK 350 BIOMT2 36 -0.934172 -0.333333 0.127322 0.00000 REMARK 350 BIOMT3 36 0.356822 -0.872678 0.333333 0.00000 REMARK 350 BIOMT1 37 0.500000 -0.645497 0.577350 0.00000 REMARK 350 BIOMT2 37 -0.866025 -0.372678 0.333333 0.00000 REMARK 350 BIOMT3 37 0.000000 -0.666667 -0.745356 0.00000 REMARK 350 BIOMT1 38 0.309017 -0.755761 -0.577350 0.00000 REMARK 350 BIOMT2 38 -0.755761 -0.563661 0.333333 0.00000 REMARK 350 BIOMT3 38 -0.577350 0.333333 -0.745356 0.00000 REMARK 350 BIOMT1 39 -0.309017 0.178411 -0.934172 0.00000 REMARK 350 BIOMT2 39 -0.755761 -0.642350 0.127322 0.00000 REMARK 350 BIOMT3 39 -0.577350 0.745356 0.333333 0.00000 REMARK 350 BIOMT1 40 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 40 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 40 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 41 -0.309017 0.755761 0.577350 0.00000 REMARK 350 BIOMT2 41 0.178411 0.642350 -0.745356 0.00000 REMARK 350 BIOMT3 41 -0.934172 -0.127322 -0.333333 0.00000 REMARK 350 BIOMT1 42 0.309017 -0.178411 0.934172 0.00000 REMARK 350 BIOMT2 42 0.178411 0.975684 0.127322 0.00000 REMARK 350 BIOMT3 42 -0.934172 0.127322 0.333333 0.00000 REMARK 350 BIOMT1 43 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 43 0.645497 0.372678 0.666667 0.00000 REMARK 350 BIOMT3 43 -0.577350 -0.333333 0.745356 0.00000 REMARK 350 BIOMT1 44 0.000000 -0.356822 -0.934172 0.00000 REMARK 350 BIOMT2 44 0.934172 -0.333333 0.127322 0.00000 REMARK 350 BIOMT3 44 -0.356822 -0.872678 0.333333 0.00000 REMARK 350 BIOMT1 45 -0.500000 0.645497 -0.577350 0.00000 REMARK 350 BIOMT2 45 0.645497 -0.166667 -0.745356 0.00000 REMARK 350 BIOMT3 45 -0.577350 -0.745356 -0.333333 0.00000 REMARK 350 BIOMT1 46 0.809017 -0.467086 -0.356822 0.00000 REMARK 350 BIOMT2 46 0.110264 -0.475684 0.872678 0.00000 REMARK 350 BIOMT3 46 -0.577350 -0.745356 -0.333333 0.00000 REMARK 350 BIOMT1 47 0.309017 0.178411 -0.934172 0.00000 REMARK 350 BIOMT2 47 0.178411 -0.975684 -0.127322 0.00000 REMARK 350 BIOMT3 47 -0.934172 -0.127322 -0.333333 0.00000 REMARK 350 BIOMT1 48 0.000000 0.934172 -0.356822 0.00000 REMARK 350 BIOMT2 48 -0.356822 -0.333333 -0.872678 0.00000 REMARK 350 BIOMT3 48 -0.934172 0.127322 0.333333 0.00000 REMARK 350 BIOMT1 49 0.309017 0.755761 0.577350 0.00000 REMARK 350 BIOMT2 49 -0.755761 0.563661 -0.333333 0.00000 REMARK 350 BIOMT3 49 -0.577350 -0.333333 0.745356 0.00000 REMARK 350 BIOMT1 50 0.809017 -0.110264 0.577350 0.00000 REMARK 350 BIOMT2 50 -0.467086 0.475684 0.745356 0.00000 REMARK 350 BIOMT3 50 -0.356822 -0.872678 0.333333 0.00000 REMARK 350 BIOMT1 51 0.000000 -0.934172 0.356822 0.00000 REMARK 350 BIOMT2 51 0.356822 -0.333333 -0.872678 0.00000 REMARK 350 BIOMT3 51 0.934172 0.127322 0.333333 0.00000 REMARK 350 BIOMT1 52 -0.309017 -0.755761 -0.577350 0.00000 REMARK 350 BIOMT2 52 -0.178411 0.642350 -0.745356 0.00000 REMARK 350 BIOMT3 52 0.934172 -0.127322 -0.333333 0.00000 REMARK 350 BIOMT1 53 -0.809017 0.110264 -0.577350 0.00000 REMARK 350 BIOMT2 53 -0.110264 0.936339 0.333333 0.00000 REMARK 350 BIOMT3 53 0.577350 0.333333 -0.745356 0.00000 REMARK 350 BIOMT1 54 -0.809017 0.467086 0.356822 0.00000 REMARK 350 BIOMT2 54 0.467086 0.142350 0.872678 0.00000 REMARK 350 BIOMT3 54 0.356822 0.872678 -0.333333 0.00000 REMARK 350 BIOMT1 55 -0.309017 -0.178411 0.934172 0.00000 REMARK 350 BIOMT2 55 0.755761 -0.642350 0.127322 0.00000 REMARK 350 BIOMT3 55 0.577350 0.745356 0.333333 0.00000 REMARK 350 BIOMT1 56 -0.500000 0.645497 -0.577350 0.00000 REMARK 350 BIOMT2 56 -0.645497 0.166667 0.745356 0.00000 REMARK 350 BIOMT3 56 0.577350 0.745356 0.333333 0.00000 REMARK 350 BIOMT1 57 -0.309017 0.755761 0.577350 0.00000 REMARK 350 BIOMT2 57 -0.178411 -0.642350 0.745356 0.00000 REMARK 350 BIOMT3 57 0.934172 0.127322 0.333333 0.00000 REMARK 350 BIOMT1 58 0.309017 -0.178411 0.934172 0.00000 REMARK 350 BIOMT2 58 -0.178411 -0.975684 -0.127322 0.00000 REMARK 350 BIOMT3 58 0.934172 -0.127322 -0.333333 0.00000 REMARK 350 BIOMT1 59 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 59 -0.645497 -0.372678 -0.666667 0.00000 REMARK 350 BIOMT3 59 0.577350 0.333333 -0.745356 0.00000 REMARK 350 BIOMT1 60 0.000000 -0.356822 -0.934172 0.00000 REMARK 350 BIOMT2 60 -0.934172 0.333333 -0.127322 0.00000 REMARK 350 BIOMT3 60 0.356822 0.872678 -0.333333 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 FORMS THE PHAGE SHELL AND BINDS TO THE PHAGE RNA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 A R 1 REMARK 465 U R 19 REMARK 465 A S 1 REMARK 465 U S 19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 C S 2 P C S 2 OP3 -0.077 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 C S 2 C2' - C3' - O3' ANGL. DEV. = 10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 2 124.11 167.54 REMARK 500 ASN A 24 149.51 -176.44 REMARK 500 PHE B 25 18.65 -140.88 REMARK 500 ASN C 12 45.30 -107.62 REMARK 500 SER C 23 -43.67 -136.20 REMARK 500 PHE C 25 54.13 -144.89 REMARK 500 ASN C 36 -164.06 73.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C2023 DISTANCE = 6.85 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AQ3 RELATED DB: PDB REMARK 900 STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH ANRNA REMARK 900 OPERATOR REMARK 900 RELATED ID: 1AQ4 RELATED DB: PDB REMARK 900 STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH ANRNA REMARK 900 OPERATOR REMARK 900 RELATED ID: 1BMS RELATED DB: PDB REMARK 900 MOL_ID: 1; MOLECULE: BACTERIOPHAGE MS2 CAPSID; CHAIN: A, B, C; REMARK 900 ENGINEERED: YES; MUTATION: P78N REMARK 900 RELATED ID: 1DZS RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (4ONE -5) COMPLEX REMARK 900 RELATED ID: 1E7X RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (2ONE -5) COMPLEX REMARK 900 RELATED ID: 1GKV RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (C-7) COMPLEX REMARK 900 RELATED ID: 1GKW RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (G-10) COMPLEX REMARK 900 RELATED ID: 1H8J RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (G -5) COMPLEX REMARK 900 RELATED ID: 1HDW RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (2THIO-U -5-6) COMPLEX REMARK 900 RELATED ID: 1HE0 RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEX REMARK 900 RELATED ID: 1HE6 RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (ADE -5) COMPLEX REMARK 900 RELATED ID: 1KUO RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (C-10) COMPLEX REMARK 900 RELATED ID: 1MSC RELATED DB: PDB REMARK 900 RELATED ID: 1MST RELATED DB: PDB REMARK 900 MOL_ID: 1; MOLECULE: BACTERIOPHAGE MS2 CAPSID; CHAIN: A, B, C; REMARK 900 ENGINEERED: YES; MUTATION: E76D REMARK 900 RELATED ID: 1MVA RELATED DB: PDB REMARK 900 STRUCTURE OF A PROTEIN CAPSID OF THE T45A MUTANT OF PHAGEMS2 REMARK 900 RELATED ID: 1MVB RELATED DB: PDB REMARK 900 STRUCTURE OF A PROTEIN CAPSID OF THE T59S MUTANT OF PHAGEMS2 REMARK 900 RELATED ID: 1U1Y RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A COMPLEX BETWEEN WT BACTERIOPHAGE MS2COAT REMARK 900 PROTEIN AND AN F5 APTAMER RNA STEMLOOP WITH2AMINOPURINE SUBSTITUTED REMARK 900 AT THE-10 POSITION REMARK 900 RELATED ID: 1ZDH RELATED DB: PDB REMARK 900 STRUCTURE OF BACTERIOPHAGE COAT PROTEIN- OPERATOR COMPLEX REMARK 900 RELATED ID: 1ZDI RELATED DB: PDB REMARK 900 STRUCTURE OF MS2 PROTEIN CAPSID REMARK 900 RELATED ID: 1ZDJ RELATED DB: PDB REMARK 900 STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX REMARK 900 RELATED ID: 1ZDK RELATED DB: PDB REMARK 900 STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX REMARK 900 RELATED ID: 2BNY RELATED DB: PDB REMARK 900 MS2 (N87A MUTANT) - RNA HAIRPIN COMPLEX REMARK 900 RELATED ID: 2BQ5 RELATED DB: PDB REMARK 900 MS2 (N87AE89K MUTANT) - RNA HAIRPIN COMPLEX REMARK 900 RELATED ID: 2BS0 RELATED DB: PDB REMARK 900 MS2 (N87AE89K MUTANT) - VARIANT QBETA RNA HAIRPIN COMPLEX REMARK 900 RELATED ID: 2BS1 RELATED DB: PDB REMARK 900 MS2 (N87AE89K MUTANT) - QBETA RNA HAIRPIN COMPLEX REMARK 900 RELATED ID: 2BU1 RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (5BRU -5) COMPLEX REMARK 900 RELATED ID: 2C4Q RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (2ONE -5) COMPLEX REMARK 900 RELATED ID: 2C4Y RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (SU-5) COMPLEX REMARK 900 RELATED ID: 2C4Z RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (2SU -5-6) COMPLEX REMARK 900 RELATED ID: 2C50 RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (A -5) COMPLEX REMARK 900 RELATED ID: 2C51 RELATED DB: PDB REMARK 900 MS2-RNA HAIRPIN (G -5) COMPLEX REMARK 900 RELATED ID: 2MS2 RELATED DB: PDB REMARK 900 MS2 VIRUS (BACTERIOPHAGE) REMARK 900 RELATED ID: 5MSF RELATED DB: PDB REMARK 900 F5 APTAMER MS2 COAT PROTEIN COMPLEX REMARK 900 RELATED ID: 6MSF RELATED DB: PDB REMARK 900 F6 APTAMER MS2 COAT PROTEIN COMPLEX REMARK 900 RELATED ID: 7MSF RELATED DB: PDB REMARK 900 F7 APTAMER MS2 COAT PROTEIN COMPLEX DBREF 2BU1 A 1 129 UNP P03612 COAT_BPMS2 1 129 DBREF 2BU1 B 1 129 UNP P03612 COAT_BPMS2 1 129 DBREF 2BU1 C 1 129 UNP P03612 COAT_BPMS2 1 129 DBREF 2BU1 R 1 19 PDB 2BU1 2BU1 1 19 DBREF 2BU1 S 1 19 PDB 2BU1 2BU1 1 19 SEQRES 1 A 129 ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY SEQRES 2 A 129 GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA SEQRES 3 A 129 ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER SEQRES 4 A 129 GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER SEQRES 5 A 129 ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO SEQRES 6 A 129 LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO SEQRES 7 A 129 VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR SEQRES 8 A 129 ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE SEQRES 9 A 129 VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO SEQRES 10 A 129 ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR SEQRES 1 B 129 ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY SEQRES 2 B 129 GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA SEQRES 3 B 129 ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER SEQRES 4 B 129 GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER SEQRES 5 B 129 ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO SEQRES 6 B 129 LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO SEQRES 7 B 129 VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR SEQRES 8 B 129 ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE SEQRES 9 B 129 VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO SEQRES 10 B 129 ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR SEQRES 1 C 129 ALA SER ASN PHE THR GLN PHE VAL LEU VAL ASP ASN GLY SEQRES 2 C 129 GLY THR GLY ASP VAL THR VAL ALA PRO SER ASN PHE ALA SEQRES 3 C 129 ASN GLY VAL ALA GLU TRP ILE SER SER ASN SER ARG SER SEQRES 4 C 129 GLN ALA TYR LYS VAL THR CYS SER VAL ARG GLN SER SER SEQRES 5 C 129 ALA GLN ASN ARG LYS TYR THR ILE LYS VAL GLU VAL PRO SEQRES 6 C 129 LYS VAL ALA THR GLN THR VAL GLY GLY VAL GLU LEU PRO SEQRES 7 C 129 VAL ALA ALA TRP ARG SER TYR LEU ASN MET GLU LEU THR SEQRES 8 C 129 ILE PRO ILE PHE ALA THR ASN SER ASP CYS GLU LEU ILE SEQRES 9 C 129 VAL LYS ALA MET GLN GLY LEU LEU LYS ASP GLY ASN PRO SEQRES 10 C 129 ILE PRO SER ALA ILE ALA ALA ASN SER GLY ILE TYR SEQRES 1 R 19 A C A U G A G G A U 5BU A C SEQRES 2 R 19 C C A U G U SEQRES 1 S 19 A C A U G A G G A U 5BU A C SEQRES 2 S 19 C C A U G U MODRES 2BU1 5BU R 11 U 5-BROMO-URIDINE-5'-MONOPHOSPHATE MODRES 2BU1 5BU S 11 U 5-BROMO-URIDINE-5'-MONOPHOSPHATE HET 5BU R 11 21 HET 5BU S 11 21 HETNAM 5BU 5-BROMO-URIDINE-5'-MONOPHOSPHATE FORMUL 4 5BU 2(C9 H12 BR N2 O9 P) FORMUL 6 HOH *205(H2 O) HELIX 1 1 PHE A 25 VAL A 29 5 5 HELIX 2 2 THR A 97 LYS A 113 1 17 HELIX 3 3 ASN A 116 ALA A 124 1 9 HELIX 4 4 PHE B 25 VAL B 29 5 5 HELIX 5 5 PRO B 78 ALA B 81 5 4 HELIX 6 6 THR B 97 LYS B 113 1 17 HELIX 7 7 ASN B 116 ALA B 124 1 9 HELIX 8 8 SER C 37 ALA C 41 5 5 HELIX 9 9 THR C 97 LYS C 113 1 17 HELIX 10 10 ASN C 116 ALA C 124 1 9 SHEET 1 AA12 PHE A 7 VAL A 10 0 SHEET 2 AA12 VAL A 18 ASN A 24 -1 O VAL A 18 N LEU A 9 SHEET 3 AA12 ALA A 30 ILE A 33 -1 O GLU A 31 N SER A 23 SHEET 4 AA12 LYS A 43 ARG A 49 -1 O VAL A 44 N TRP A 32 SHEET 5 AA12 ASN A 55 VAL A 72 -1 O LYS A 57 N ARG A 49 SHEET 6 AA12 VAL A 75 PRO A 93 -1 O VAL A 75 N VAL A 72 SHEET 7 AA12 ARG B 83 PRO B 93 -1 O TYR B 85 N THR A 91 SHEET 8 AA12 ASN B 55 PRO B 65 -1 O ARG B 56 N ILE B 92 SHEET 9 AA12 LYS B 43 ARG B 49 -1 O LYS B 43 N GLU B 63 SHEET 10 AA12 ALA B 30 ILE B 33 -1 O ALA B 30 N CYS B 46 SHEET 11 AA12 VAL B 18 ASN B 24 -1 O ALA B 21 N ILE B 33 SHEET 12 AA12 PHE B 7 VAL B 10 -1 O PHE B 7 N VAL B 20 SHEET 1 CA 6 PHE C 7 VAL C 10 0 SHEET 2 CA 6 VAL C 18 ALA C 26 -1 O VAL C 18 N LEU C 9 SHEET 3 CA 6 VAL C 29 SER C 34 -1 O VAL C 29 N ALA C 26 SHEET 4 CA 6 LYS C 43 GLN C 50 -1 O VAL C 44 N TRP C 32 SHEET 5 CA 6 ASN C 55 VAL C 72 -1 O LYS C 57 N ARG C 49 SHEET 6 CA 6 VAL C 75 PRO C 93 -1 O VAL C 75 N VAL C 72 LINK O3' U R 10 P 5BU R 11 1555 1555 1.61 LINK O3' 5BU R 11 P A R 12 1555 1555 1.61 LINK O3' U S 10 P 5BU S 11 1555 1555 1.61 LINK O3' 5BU S 11 P A S 12 1555 1555 1.61 CISPEP 1 LEU B 77 PRO B 78 0 -0.77 CRYST1 288.000 288.000 653.000 90.00 90.00 120.00 H 3 2 540 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003472 0.002005 0.000000 0.00000 SCALE2 0.000000 0.004009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001531 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.809017 0.110264 -0.577350 0.00000 MTRIX2 2 0.467086 0.475684 0.745356 0.00000 MTRIX3 2 0.356822 -0.872678 0.333333 0.00000 MTRIX1 3 0.500000 0.645497 -0.577350 0.00000 MTRIX2 3 0.866025 -0.372678 0.333333 0.00000 MTRIX3 3 0.000000 -0.666667 -0.745356 0.00000 MTRIX1 4 0.500000 0.866025 0.000000 0.00000 MTRIX2 4 0.645497 -0.372678 -0.666667 0.00000 MTRIX3 4 -0.577350 0.333333 -0.745356 0.00000 MTRIX1 5 0.809017 0.467086 0.356822 0.00000 MTRIX2 5 0.110264 0.475684 -0.872678 0.00000 MTRIX3 5 -0.577350 0.745356 0.333333 0.00000 MTRIX1 6 0.309017 0.755761 0.577350 0.00000 MTRIX2 6 0.755761 -0.563661 0.333333 0.00000 MTRIX3 6 0.577350 0.333333 -0.745356 0.00000 MTRIX1 7 0.809017 -0.110264 0.577350 0.00000 MTRIX2 7 0.467086 -0.475684 -0.745356 0.00000 MTRIX3 7 0.356822 0.872678 -0.333333 0.00000 MTRIX1 8 0.809017 -0.467086 -0.356822 0.00000 MTRIX2 8 -0.110264 0.475684 -0.872678 0.00000 MTRIX3 8 0.577350 0.745356 0.333333 0.00000 MTRIX1 9 0.309017 0.178411 -0.934172 0.00000 MTRIX2 9 -0.178411 0.975684 0.127322 0.00000 MTRIX3 9 0.934172 0.127322 0.333333 0.00000 MTRIX1 10 0.000000 0.934172 -0.356822 0.00000 MTRIX2 10 0.356822 0.333333 0.872678 0.00000 MTRIX3 10 0.934172 -0.127322 -0.333333 0.00000