PDB Short entry for 2CRG HEADER GENE REGULATION 20-MAY-05 2CRG TITLE SOLUTION STRUCTURE OF THE MYB-LIKE DNA-BINDING DOMAIN OF MOUSE MTA3 TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: METASTASIS ASSOCIATED PROTEIN MTA3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MYB_DNA_BINDING (RESIDUES 1-70); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MTA3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041213-14; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS TRANSCRIPTION FACTOR, HELIX TURN HELIX, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, GENE KEYWDS 4 REGULATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.ENDO,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CRG 1 REMARK SEQADV REVDAT 2 24-FEB-09 2CRG 1 VERSN REVDAT 1 20-NOV-05 2CRG 0 JRNL AUTH H.ENDO,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE MYB-LIKE DNA-BINDING DOMAIN OF JRNL TITL 2 MOUSE MTA3 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT,P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CRG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024542. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120 MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.07MM 13C,15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS-HCL(PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9296, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 103.44 -51.80 REMARK 500 1 LYS A 28 48.79 -75.78 REMARK 500 1 ASP A 36 -60.03 -103.62 REMARK 500 1 THR A 56 -176.16 -66.41 REMARK 500 1 TYR A 59 52.60 34.41 REMARK 500 2 SER A 5 -44.11 -130.06 REMARK 500 2 TYR A 26 -64.92 -96.10 REMARK 500 2 ASP A 29 98.40 -61.36 REMARK 500 2 ASP A 36 -62.34 -99.48 REMARK 500 2 THR A 56 160.83 -40.73 REMARK 500 2 ASP A 57 46.53 -80.31 REMARK 500 2 ARG A 58 -61.23 -101.21 REMARK 500 3 SER A 3 175.97 -51.61 REMARK 500 3 SER A 5 42.36 -81.21 REMARK 500 3 LYS A 28 48.76 -75.73 REMARK 500 3 ILE A 33 -72.12 -52.30 REMARK 500 3 THR A 56 144.87 -39.47 REMARK 500 3 ASP A 57 34.60 -96.83 REMARK 500 3 GLN A 61 -71.59 -54.44 REMARK 500 3 SER A 65 42.17 -82.08 REMARK 500 4 GLU A 9 29.61 40.03 REMARK 500 4 LYS A 28 47.13 -77.30 REMARK 500 4 ILE A 33 -71.53 -53.75 REMARK 500 4 ASP A 57 46.36 -81.05 REMARK 500 5 SER A 6 130.15 -36.29 REMARK 500 5 ASP A 29 90.08 -58.45 REMARK 500 5 ASP A 36 -60.69 -102.79 REMARK 500 5 ARG A 58 85.47 -62.17 REMARK 500 5 SER A 65 43.38 -83.01 REMARK 500 5 PRO A 67 -174.26 -69.71 REMARK 500 6 SER A 3 119.63 -167.66 REMARK 500 6 SER A 6 107.39 -38.27 REMARK 500 6 MET A 8 172.11 -55.59 REMARK 500 6 LYS A 28 44.48 -79.40 REMARK 500 6 ASP A 36 -62.08 -103.48 REMARK 500 7 LYS A 28 48.56 -75.89 REMARK 500 7 ASP A 36 -62.43 -100.03 REMARK 500 7 GLN A 61 -37.95 -38.34 REMARK 500 7 PRO A 67 97.61 -69.85 REMARK 500 7 SER A 69 -56.73 -132.66 REMARK 500 8 LYS A 28 -26.20 -38.97 REMARK 500 8 ASP A 29 87.42 -62.57 REMARK 500 8 ASP A 36 -60.28 -101.77 REMARK 500 8 ASP A 57 -39.74 -35.12 REMARK 500 8 ARG A 58 142.25 -35.08 REMARK 500 8 GLN A 61 106.13 -39.84 REMARK 500 8 PRO A 67 83.99 -69.83 REMARK 500 9 GLU A 9 29.69 42.03 REMARK 500 9 GLU A 10 43.80 -87.79 REMARK 500 9 TRP A 11 128.87 -39.01 REMARK 500 REMARK 500 THIS ENTRY HAS 136 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMI002017328.1 RELATED DB: TARGETDB DBREF 2CRG A 8 64 UNP Q924K8 MTA3_MOUSE 267 323 SEQADV 2CRG GLY A 1 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG SER A 2 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG SER A 3 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG GLY A 4 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG SER A 5 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG SER A 6 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG GLY A 7 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG SER A 65 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG GLY A 66 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG PRO A 67 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG SER A 68 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG SER A 69 UNP Q924K8 CLONING ARTIFACT SEQADV 2CRG GLY A 70 UNP Q924K8 CLONING ARTIFACT SEQRES 1 A 70 GLY SER SER GLY SER SER GLY MET GLU GLU TRP SER ALA SEQRES 2 A 70 SER GLU ALA CYS LEU PHE GLU GLU ALA LEU GLU LYS TYR SEQRES 3 A 70 GLY LYS ASP PHE ASN ASP ILE ARG GLN ASP PHE LEU PRO SEQRES 4 A 70 TRP LYS SER LEU THR SER ILE ILE GLU TYR TYR TYR MET SEQRES 5 A 70 TRP LYS THR THR ASP ARG TYR VAL GLN GLN LYS ARG SER SEQRES 6 A 70 GLY PRO SER SER GLY HELIX 1 1 SER A 12 TYR A 26 1 15 HELIX 2 2 ASP A 29 ASP A 36 1 8 HELIX 3 3 SER A 42 THR A 55 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000