PDB Short entry for 2CXE HEADER LYASE 28-JUN-05 2CXE TITLE CRYSTAL STRUCTURE OF OCTAMERIC RIBULOSE-1,5-BISPHOSPHATE TITLE 2 CARBOXYLASE/OXYGENASE (RUBISCO) FROM PYROCOCCUS HORIKOSHII OT3 (FORM- TITLE 3 2 CRYSTAL) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBULOSE BISPHOSPHATE CARBOXYLASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, RUBISCO; COMPND 5 EC: 4.1.1.39; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 70601; SOURCE 4 STRAIN: OT3; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 2 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 3 INITIATIVE, RSGI, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR E.MIZOHATA,C.MISHIMA,R.AKASAKA,H.UDA,T.TERADA,M.SHIROUZU,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 6 13-MAR-24 2CXE 1 REMARK REVDAT 5 13-JUL-11 2CXE 1 VERSN REVDAT 4 15-DEC-10 2CXE 1 MTRIX1 MTRIX2 MTRIX3 REVDAT 3 12-MAY-09 2CXE 1 MTRIX1 MTRIX2 MTRIX3 REVDAT 2 24-FEB-09 2CXE 1 VERSN REVDAT 1 28-DEC-05 2CXE 0 JRNL AUTH E.MIZOHATA,C.MISHIMA,R.AKASAKA,H.UDA,T.TERADA,M.SHIROUZU, JRNL AUTH 2 S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF OCTAMERIC RIBULOSE-1,5-BISPHOSPHATE JRNL TITL 2 CARBOXYLASE/OXYGENASE (RUBISCO) FROM PYROCOCCUS HORIKOSHII JRNL TITL 3 OT3 (FORM-2 CRYSTAL) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 416476.720 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 85.7 REMARK 3 NUMBER OF REFLECTIONS : 36882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.295 REMARK 3 FREE R VALUE : 0.328 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1838 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5162 REMARK 3 BIN R VALUE (WORKING SET) : 0.5800 REMARK 3 BIN FREE R VALUE : 0.6060 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 290 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.036 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13144 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 204 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 11.96000 REMARK 3 B22 (A**2) : -43.61000 REMARK 3 B33 (A**2) : 31.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 46.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.68 REMARK 3 ESD FROM SIGMAA (A) : 1.40 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.74 REMARK 3 ESD FROM C-V SIGMAA (A) : 1.45 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.074 REMARK 3 BOND ANGLES (DEGREES) : 5.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 3.110 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.31 REMARK 3 BSOL : 39.28 REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000024733. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39367 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE, SODIUM CHLORIDE, REMARK 280 SODIUM ACETATE, PEG6000, TRIS, PH 5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 85.73900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 74.60350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 85.73900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 74.60350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE OCTAMER. ALTHOUGH THE REMARK 300 PRESENT ASYMMETIC UNIT IS TETRAMER, NCS CONSTRAINT IS APPLIED TO REMARK 300 PRODUCE MONOMER (SEGMENT ID A). THE SECOND, THIRD, AND FOURTH PART REMARK 300 IN THE ASYMMETRIC UNIT IS GENERATED BY MTRIX IN THE PDB FILE. REMARK 300 BIOLOGICAL ASSEMBLY IS GENERATED FROM THE ASYMMETRIC COMPONENT BY REMARK 300 OPERATOR -X, Y, -Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 436 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 437 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET A 2 REMARK 465 VAL A 3 REMARK 465 LEU A 4 REMARK 465 ARG A 5 REMARK 465 MET A 6 REMARK 465 LYS A 7 REMARK 465 VAL A 8 REMARK 465 LYS A 425 REMARK 465 VAL A 426 REMARK 465 GLY A 427 REMARK 465 VAL A 428 REMARK 465 GLN A 429 REMARK 465 HIS A 430 REMARK 465 MET B 1 REMARK 465 MET B 2 REMARK 465 VAL B 3 REMARK 465 LEU B 4 REMARK 465 ARG B 5 REMARK 465 MET B 6 REMARK 465 LYS B 7 REMARK 465 VAL B 8 REMARK 465 LYS B 425 REMARK 465 VAL B 426 REMARK 465 GLY B 427 REMARK 465 VAL B 428 REMARK 465 GLN B 429 REMARK 465 HIS B 430 REMARK 465 MET C 1 REMARK 465 MET C 2 REMARK 465 VAL C 3 REMARK 465 LEU C 4 REMARK 465 ARG C 5 REMARK 465 MET C 6 REMARK 465 LYS C 7 REMARK 465 VAL C 8 REMARK 465 LYS C 425 REMARK 465 VAL C 426 REMARK 465 GLY C 427 REMARK 465 VAL C 428 REMARK 465 GLN C 429 REMARK 465 HIS C 430 REMARK 465 MET D 1 REMARK 465 MET D 2 REMARK 465 VAL D 3 REMARK 465 LEU D 4 REMARK 465 ARG D 5 REMARK 465 MET D 6 REMARK 465 LYS D 7 REMARK 465 VAL D 8 REMARK 465 LYS D 425 REMARK 465 VAL D 426 REMARK 465 GLY D 427 REMARK 465 VAL D 428 REMARK 465 GLN D 429 REMARK 465 HIS D 430 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 436 O HOH C 439 0.14 REMARK 500 O HOH C 431 O HOH C 450 1.37 REMARK 500 O HOH A 447 O HOH A 481 1.37 REMARK 500 O HOH D 431 O HOH D 448 1.39 REMARK 500 O HOH B 447 O HOH B 480 1.49 REMARK 500 NH2 ARG C 23 NH1 ARG D 23 1.55 REMARK 500 NH1 ARG C 23 NH2 ARG D 23 1.59 REMARK 500 CD ARG C 417 O HOH C 481 1.65 REMARK 500 OE2 GLU C 95 NH1 ARG D 131 1.81 REMARK 500 NH1 ARG C 131 OE2 GLU D 95 1.90 REMARK 500 OE1 GLU B 94 OG1 THR C 192 2.07 REMARK 500 O TRP B 10 N LEU B 12 2.07 REMARK 500 O TRP C 10 N LEU C 12 2.07 REMARK 500 O TRP A 10 N LEU A 12 2.07 REMARK 500 O TRP D 10 N LEU D 12 2.08 REMARK 500 OE2 GLU C 95 OE2 GLU D 128 2.10 REMARK 500 O HOH B 466 O HOH C 469 2.13 REMARK 500 O ASP D 188 N ASN D 190 2.14 REMARK 500 O ASP B 188 N ASN B 190 2.14 REMARK 500 O ASP A 188 N ASN A 190 2.14 REMARK 500 O ASP C 188 N ASN C 190 2.14 REMARK 500 O TYR D 127 N TYR D 129 2.17 REMARK 500 O TYR C 127 N TYR C 129 2.17 REMARK 500 O TYR A 127 N TYR A 129 2.17 REMARK 500 O TYR B 127 N TYR B 129 2.18 REMARK 500 OG1 THR B 192 OE1 GLU C 94 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O THR B 56 CD1 LEU D 421 3444 0.58 REMARK 500 OG SER C 422 O ALA D 424 3444 1.07 REMARK 500 OG SER C 422 C ALA D 424 3444 1.34 REMARK 500 NH1 ARG A 23 NH2 ARG B 23 2555 1.63 REMARK 500 NH2 ARG A 23 NH1 ARG B 23 2555 1.66 REMARK 500 OE1 GLU B 9 CD2 LEU D 421 3444 1.69 REMARK 500 CD GLU B 9 CD2 LEU D 421 3444 1.80 REMARK 500 C THR B 56 CD1 LEU D 421 3444 1.81 REMARK 500 NH1 ARG A 131 OE2 GLU B 95 2555 1.90 REMARK 500 OE2 GLU A 95 NH1 ARG B 131 2555 1.95 REMARK 500 O THR B 56 CG LEU D 421 3444 1.98 REMARK 500 CB ALA A 424 O VAL C 37 4445 2.03 REMARK 500 OE1 GLU D 94 OG1 THR D 192 2555 2.09 REMARK 500 O HOH A 469 O HOH A 469 2555 2.09 REMARK 500 CB SER C 422 O ALA D 424 3444 2.11 REMARK 500 OE2 GLU B 9 CD2 LEU D 421 3444 2.14 REMARK 500 OE1 GLU A 94 OG1 THR A 192 2555 2.16 REMARK 500 OE2 GLU A 128 OE2 GLU B 95 2555 2.17 REMARK 500 O HOH D 468 O HOH D 468 2555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 10 CE2 TRP A 10 CZ2 0.139 REMARK 500 TRP A 10 CD2 TRP A 10 CE3 0.111 REMARK 500 TYR A 11 CG TYR A 11 CD1 0.112 REMARK 500 TYR A 11 CZ TYR A 11 CE2 0.117 REMARK 500 PHE A 14 CB PHE A 14 CG -0.104 REMARK 500 PHE A 14 CG PHE A 14 CD2 -0.095 REMARK 500 VAL A 15 CB VAL A 15 CG1 -0.141 REMARK 500 ASP A 16 CB ASP A 16 CG -0.132 REMARK 500 ASN A 18 CB ASN A 18 CG 0.199 REMARK 500 ASN A 18 CG ASN A 18 ND2 0.169 REMARK 500 GLU A 20 CD GLU A 20 OE1 0.093 REMARK 500 GLU A 20 C GLU A 20 O 0.150 REMARK 500 PRO A 21 CA PRO A 21 CB 0.123 REMARK 500 TYR A 31 CG TYR A 31 CD2 0.090 REMARK 500 TYR A 31 CZ TYR A 31 CE2 0.123 REMARK 500 TYR A 31 CE2 TYR A 31 CD2 0.129 REMARK 500 PHE A 32 CB PHE A 32 CG -0.116 REMARK 500 ASN A 35 C ASN A 35 O 0.139 REMARK 500 VAL A 37 CB VAL A 37 CG2 0.132 REMARK 500 GLU A 40 CG GLU A 40 CD 0.106 REMARK 500 GLU A 40 CD GLU A 40 OE1 0.089 REMARK 500 GLU A 40 CD GLU A 40 OE2 0.106 REMARK 500 ARG A 45 CZ ARG A 45 NH2 0.084 REMARK 500 ALA A 47 C ALA A 47 O -0.145 REMARK 500 SER A 48 CA SER A 48 CB 0.100 REMARK 500 SER A 48 CB SER A 48 OG 0.090 REMARK 500 GLU A 49 CG GLU A 49 CD 0.129 REMARK 500 GLU A 49 CD GLU A 49 OE1 0.080 REMARK 500 TRP A 55 CB TRP A 55 CG -0.138 REMARK 500 THR A 56 N THR A 56 CA 0.137 REMARK 500 THR A 56 CA THR A 56 CB 0.218 REMARK 500 THR A 56 CB THR A 56 CG2 0.220 REMARK 500 THR A 56 CA THR A 56 C 0.200 REMARK 500 THR A 56 C THR A 56 O 0.132 REMARK 500 THR A 57 CA THR A 57 CB 0.319 REMARK 500 TRP A 59 CD2 TRP A 59 CE3 0.106 REMARK 500 TRP A 59 CE3 TRP A 59 CZ3 0.121 REMARK 500 TRP A 59 CZ3 TRP A 59 CH2 0.103 REMARK 500 LEU A 61 CG LEU A 61 CD2 0.259 REMARK 500 LEU A 61 CA LEU A 61 C 0.172 REMARK 500 GLU A 63 CG GLU A 63 CD 0.126 REMARK 500 GLU A 63 CD GLU A 63 OE1 0.146 REMARK 500 GLU A 63 CD GLU A 63 OE2 0.098 REMARK 500 MET A 64 SD MET A 64 CE 1.172 REMARK 500 LYS A 66 CG LYS A 66 CD 0.298 REMARK 500 LYS A 66 CD LYS A 66 CE 0.289 REMARK 500 SER A 68 CA SER A 68 CB 0.154 REMARK 500 SER A 68 CB SER A 68 OG 0.112 REMARK 500 MET A 69 SD MET A 69 CE 0.435 REMARK 500 GLU A 76 CB GLU A 76 CG 0.149 REMARK 500 REMARK 500 THIS ENTRY HAS 996 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 9 OE1 - CD - OE2 ANGL. DEV. = 8.6 DEGREES REMARK 500 LEU A 12 CB - CG - CD2 ANGL. DEV. = 11.6 DEGREES REMARK 500 ASP A 16 CB - CG - OD1 ANGL. DEV. = -11.0 DEGREES REMARK 500 LEU A 17 CA - CB - CG ANGL. DEV. = -18.9 DEGREES REMARK 500 GLU A 20 N - CA - CB ANGL. DEV. = 10.9 DEGREES REMARK 500 PRO A 21 C - N - CA ANGL. DEV. = 19.5 DEGREES REMARK 500 PRO A 21 CA - N - CD ANGL. DEV. = -9.7 DEGREES REMARK 500 PRO A 21 O - C - N ANGL. DEV. = 10.8 DEGREES REMARK 500 ASP A 24 CB - CG - OD2 ANGL. DEV. = 7.9 DEGREES REMARK 500 LEU A 26 CA - CB - CG ANGL. DEV. = -17.2 DEGREES REMARK 500 PRO A 39 C - N - CD ANGL. DEV. = -15.8 DEGREES REMARK 500 GLY A 44 N - CA - C ANGL. DEV. = -16.0 DEGREES REMARK 500 GLU A 49 CA - CB - CG ANGL. DEV. = -13.7 DEGREES REMARK 500 THR A 56 C - N - CA ANGL. DEV. = 18.2 DEGREES REMARK 500 LEU A 58 CB - CG - CD2 ANGL. DEV. = -12.7 DEGREES REMARK 500 LEU A 58 N - CA - C ANGL. DEV. = 19.0 DEGREES REMARK 500 LEU A 61 CB - CG - CD1 ANGL. DEV. = -13.4 DEGREES REMARK 500 LEU A 61 CB - CG - CD2 ANGL. DEV. = 13.9 DEGREES REMARK 500 MET A 64 CG - SD - CE ANGL. DEV. = 17.1 DEGREES REMARK 500 LYS A 66 CB - CG - CD ANGL. DEV. = 17.3 DEGREES REMARK 500 SER A 68 CA - CB - OG ANGL. DEV. = 19.7 DEGREES REMARK 500 MET A 69 CG - SD - CE ANGL. DEV. = 9.8 DEGREES REMARK 500 LEU A 75 CB - CG - CD1 ANGL. DEV. = -10.3 DEGREES REMARK 500 LEU A 75 CB - CG - CD2 ANGL. DEV. = 11.4 DEGREES REMARK 500 LEU A 75 N - CA - C ANGL. DEV. = -17.7 DEGREES REMARK 500 GLU A 76 CG - CD - OE2 ANGL. DEV. = 13.4 DEGREES REMARK 500 GLU A 80 CG - CD - OE1 ANGL. DEV. = 17.0 DEGREES REMARK 500 GLU A 80 CG - CD - OE2 ANGL. DEV. = -13.8 DEGREES REMARK 500 GLY A 81 N - CA - C ANGL. DEV. = -16.0 DEGREES REMARK 500 TYR A 82 CB - CG - CD1 ANGL. DEV. = -4.2 DEGREES REMARK 500 LYS A 85 CD - CE - NZ ANGL. DEV. = 21.4 DEGREES REMARK 500 LYS A 85 N - CA - C ANGL. DEV. = -20.8 DEGREES REMARK 500 PRO A 89 C - N - CA ANGL. DEV. = 16.4 DEGREES REMARK 500 PRO A 89 C - N - CD ANGL. DEV. = -15.9 DEGREES REMARK 500 THR A 91 CA - C - O ANGL. DEV. = 14.1 DEGREES REMARK 500 THR A 91 CA - C - N ANGL. DEV. = -18.1 DEGREES REMARK 500 LEU A 92 CB - CG - CD1 ANGL. DEV. = -19.8 DEGREES REMARK 500 LEU A 92 CB - CG - CD2 ANGL. DEV. = 13.2 DEGREES REMARK 500 GLU A 94 N - CA - C ANGL. DEV. = -24.0 DEGREES REMARK 500 GLU A 95 N - CA - CB ANGL. DEV. = 14.9 DEGREES REMARK 500 GLU A 95 CG - CD - OE2 ANGL. DEV. = -13.1 DEGREES REMARK 500 LEU A 101 CB - CG - CD2 ANGL. DEV. = -18.1 DEGREES REMARK 500 ARG A 119 CG - CD - NE ANGL. DEV. = -16.9 DEGREES REMARK 500 ARG A 119 NE - CZ - NH1 ANGL. DEV. = -5.2 DEGREES REMARK 500 PRO A 126 CA - C - N ANGL. DEV. = 14.2 DEGREES REMARK 500 TYR A 127 CB - CA - C ANGL. DEV. = -12.2 DEGREES REMARK 500 TYR A 129 CB - CG - CD2 ANGL. DEV. = 4.0 DEGREES REMARK 500 TYR A 129 CB - CG - CD1 ANGL. DEV. = -4.2 DEGREES REMARK 500 LEU A 130 CB - CG - CD2 ANGL. DEV. = 18.6 DEGREES REMARK 500 LEU A 130 O - C - N ANGL. DEV. = -11.1 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 717 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 11 -7.50 -40.90 REMARK 500 ASP A 16 96.64 -172.56 REMARK 500 ARG A 23 -36.39 -32.22 REMARK 500 ASP A 24 38.53 -97.33 REMARK 500 ASN A 35 67.64 -157.58 REMARK 500 ALA A 42 -75.47 -79.43 REMARK 500 ALA A 43 -9.39 -42.83 REMARK 500 SER A 48 -78.09 -66.62 REMARK 500 GLU A 49 -75.77 -30.11 REMARK 500 SER A 50 27.53 -55.26 REMARK 500 SER A 51 -112.58 -167.10 REMARK 500 TRP A 55 123.93 63.80 REMARK 500 THR A 56 59.55 -140.98 REMARK 500 THR A 57 -92.51 -137.65 REMARK 500 LYS A 60 86.26 -39.39 REMARK 500 LEU A 61 125.61 -35.02 REMARK 500 GLU A 63 -78.33 -41.16 REMARK 500 MET A 64 11.57 -64.30 REMARK 500 TYR A 74 142.08 169.94 REMARK 500 LEU A 75 90.79 -164.22 REMARK 500 GLU A 80 25.49 -69.71 REMARK 500 LEU A 90 35.16 -58.84 REMARK 500 LEU A 101 -67.50 -27.29 REMARK 500 VAL A 105 37.12 -86.19 REMARK 500 ALA A 106 16.91 -167.09 REMARK 500 PHE A 110 7.62 -63.91 REMARK 500 MET A 112 120.55 -20.25 REMARK 500 ALA A 114 10.37 -48.54 REMARK 500 TYR A 127 -80.30 -16.85 REMARK 500 GLU A 128 -15.69 -20.99 REMARK 500 ASP A 151 -62.47 -95.47 REMARK 500 ARG A 152 -179.10 -44.92 REMARK 500 GLU A 168 -75.53 -73.06 REMARK 500 GLU A 169 -42.01 -28.82 REMARK 500 TYR A 175 -38.15 -37.35 REMARK 500 GLU A 189 -16.14 -15.48 REMARK 500 THR A 192 -84.03 -121.34 REMARK 500 PRO A 195 -55.01 -22.71 REMARK 500 GLU A 216 -84.17 -49.78 REMARK 500 MET A 281 -5.27 112.63 REMARK 500 ALA A 283 -9.10 -48.42 REMARK 500 PHE A 285 -28.03 -156.86 REMARK 500 ARG A 287 -68.71 -96.20 REMARK 500 LYS A 300 -61.94 -98.47 REMARK 500 ALA A 315 79.90 -116.80 REMARK 500 MET A 319 76.34 -106.09 REMARK 500 ALA A 320 40.43 -62.98 REMARK 500 ASN A 322 84.14 -33.98 REMARK 500 TYR A 323 -6.76 -43.32 REMARK 500 GLU A 325 -70.01 -76.78 REMARK 500 REMARK 500 THIS ENTRY HAS 245 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 19 0.08 SIDE CHAIN REMARK 500 PHE A 73 0.11 SIDE CHAIN REMARK 500 PHE A 110 0.08 SIDE CHAIN REMARK 500 TYR A 127 0.08 SIDE CHAIN REMARK 500 TYR A 129 0.09 SIDE CHAIN REMARK 500 HIS A 132 0.09 SIDE CHAIN REMARK 500 PHE A 146 0.09 SIDE CHAIN REMARK 500 TYR A 175 0.07 SIDE CHAIN REMARK 500 TYR A 207 0.08 SIDE CHAIN REMARK 500 ARG A 210 0.12 SIDE CHAIN REMARK 500 TYR A 248 0.10 SIDE CHAIN REMARK 500 TYR A 263 0.10 SIDE CHAIN REMARK 500 PHE A 285 0.08 SIDE CHAIN REMARK 500 PHE A 332 0.10 SIDE CHAIN REMARK 500 PHE A 363 0.10 SIDE CHAIN REMARK 500 TYR B 19 0.08 SIDE CHAIN REMARK 500 PHE B 73 0.11 SIDE CHAIN REMARK 500 PHE B 110 0.08 SIDE CHAIN REMARK 500 TYR B 127 0.08 SIDE CHAIN REMARK 500 TYR B 129 0.09 SIDE CHAIN REMARK 500 HIS B 132 0.09 SIDE CHAIN REMARK 500 PHE B 146 0.09 SIDE CHAIN REMARK 500 TYR B 175 0.07 SIDE CHAIN REMARK 500 TYR B 207 0.08 SIDE CHAIN REMARK 500 ARG B 210 0.12 SIDE CHAIN REMARK 500 TYR B 248 0.10 SIDE CHAIN REMARK 500 TYR B 263 0.10 SIDE CHAIN REMARK 500 PHE B 285 0.08 SIDE CHAIN REMARK 500 PHE B 332 0.10 SIDE CHAIN REMARK 500 PHE B 363 0.10 SIDE CHAIN REMARK 500 TYR C 19 0.08 SIDE CHAIN REMARK 500 PHE C 73 0.11 SIDE CHAIN REMARK 500 PHE C 110 0.08 SIDE CHAIN REMARK 500 TYR C 127 0.08 SIDE CHAIN REMARK 500 TYR C 129 0.09 SIDE CHAIN REMARK 500 HIS C 132 0.09 SIDE CHAIN REMARK 500 PHE C 146 0.09 SIDE CHAIN REMARK 500 TYR C 175 0.07 SIDE CHAIN REMARK 500 TYR C 207 0.08 SIDE CHAIN REMARK 500 ARG C 210 0.12 SIDE CHAIN REMARK 500 TYR C 248 0.10 SIDE CHAIN REMARK 500 TYR C 263 0.10 SIDE CHAIN REMARK 500 PHE C 285 0.08 SIDE CHAIN REMARK 500 PHE C 332 0.10 SIDE CHAIN REMARK 500 PHE C 363 0.10 SIDE CHAIN REMARK 500 TYR D 19 0.08 SIDE CHAIN REMARK 500 PHE D 73 0.11 SIDE CHAIN REMARK 500 PHE D 110 0.08 SIDE CHAIN REMARK 500 TYR D 127 0.08 SIDE CHAIN REMARK 500 TYR D 129 0.09 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 60 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 216 -10.18 REMARK 500 GLU B 216 -10.17 REMARK 500 GLU C 216 -10.13 REMARK 500 GLU D 216 -10.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CWX RELATED DB: PDB REMARK 900 THE SAME PROTEIN OF DIFFERENT SPACE GROUP. REMARK 900 RELATED ID: PHO001000939.1 RELATED DB: TARGETDB DBREF 2CXE A 1 430 UNP O58677 RBL_PYRHO 1 430 DBREF 2CXE B 1 430 UNP O58677 RBL_PYRHO 1 430 DBREF 2CXE C 1 430 UNP O58677 RBL_PYRHO 1 430 DBREF 2CXE D 1 430 UNP O58677 RBL_PYRHO 1 430 SEQRES 1 A 430 MET MET VAL LEU ARG MET LYS VAL GLU TRP TYR LEU ASP SEQRES 2 A 430 PHE VAL ASP LEU ASN TYR GLU PRO GLY ARG ASP GLU LEU SEQRES 3 A 430 ILE VAL GLU TYR TYR PHE GLU PRO ASN GLY VAL SER PRO SEQRES 4 A 430 GLU GLU ALA ALA GLY ARG ILE ALA SER GLU SER SER ILE SEQRES 5 A 430 GLY THR TRP THR THR LEU TRP LYS LEU PRO GLU MET ALA SEQRES 6 A 430 LYS ARG SER MET ALA LYS VAL PHE TYR LEU GLU LYS HIS SEQRES 7 A 430 GLY GLU GLY TYR ILE ALA LYS ILE ALA TYR PRO LEU THR SEQRES 8 A 430 LEU PHE GLU GLU GLY SER LEU VAL GLN LEU PHE SER ALA SEQRES 9 A 430 VAL ALA GLY ASN VAL PHE GLY MET LYS ALA LEU LYS ASN SEQRES 10 A 430 LEU ARG LEU LEU ASP PHE HIS PRO PRO TYR GLU TYR LEU SEQRES 11 A 430 ARG HIS PHE LYS GLY PRO GLN PHE GLY VAL GLN GLY ILE SEQRES 12 A 430 ARG GLU PHE MET GLY VAL LYS ASP ARG PRO LEU THR ALA SEQRES 13 A 430 THR VAL PRO LYS PRO LYS MET GLY TRP SER VAL GLU GLU SEQRES 14 A 430 TYR ALA GLU ILE ALA TYR GLU LEU TRP SER GLY GLY ILE SEQRES 15 A 430 ASP LEU LEU LYS ASP ASP GLU ASN PHE THR SER PHE PRO SEQRES 16 A 430 PHE ASN ARG PHE GLU GLU ARG VAL ARG LYS LEU TYR ARG SEQRES 17 A 430 VAL ARG ASP ARG VAL GLU ALA GLU THR GLY GLU THR LYS SEQRES 18 A 430 GLU TYR LEU ILE ASN ILE THR GLY PRO VAL ASN ILE MET SEQRES 19 A 430 GLU LYS ARG ALA GLU MET VAL ALA ASN GLU GLY GLY GLN SEQRES 20 A 430 TYR VAL MET ILE ASP ILE VAL VAL ALA GLY TRP SER ALA SEQRES 21 A 430 LEU GLN TYR MET ARG GLU VAL THR GLU ASP LEU GLY LEU SEQRES 22 A 430 ALA ILE HIS ALA HIS ARG ALA MET HIS ALA ALA PHE THR SEQRES 23 A 430 ARG ASN PRO ARG HIS GLY ILE THR MET LEU ALA LEU ALA SEQRES 24 A 430 LYS ALA ALA ARG MET ILE GLY VAL ASP GLN ILE HIS THR SEQRES 25 A 430 GLY THR ALA VAL GLY LYS MET ALA GLY ASN TYR GLU GLU SEQRES 26 A 430 ILE LYS ARG ILE ASN ASP PHE LEU LEU SER LYS TRP GLU SEQRES 27 A 430 HIS ILE ARG PRO VAL PHE PRO VAL ALA SER GLY GLY LEU SEQRES 28 A 430 HIS PRO GLY LEU MET PRO GLU LEU ILE ARG LEU PHE GLY SEQRES 29 A 430 LYS ASP LEU VAL ILE GLN ALA GLY GLY GLY VAL MET GLY SEQRES 30 A 430 HIS PRO ASP GLY PRO ARG ALA GLY ALA LYS ALA LEU ARG SEQRES 31 A 430 ASP ALA ILE ASP ALA ALA ILE GLU GLY VAL ASP LEU ASP SEQRES 32 A 430 GLU LYS ALA LYS SER SER PRO GLU LEU LYS LYS SER LEU SEQRES 33 A 430 ARG GLU VAL GLY LEU SER LYS ALA LYS VAL GLY VAL GLN SEQRES 34 A 430 HIS SEQRES 1 B 430 MET MET VAL LEU ARG MET LYS VAL GLU TRP TYR LEU ASP SEQRES 2 B 430 PHE VAL ASP LEU ASN TYR GLU PRO GLY ARG ASP GLU LEU SEQRES 3 B 430 ILE VAL GLU TYR TYR PHE GLU PRO ASN GLY VAL SER PRO SEQRES 4 B 430 GLU GLU ALA ALA GLY ARG ILE ALA SER GLU SER SER ILE SEQRES 5 B 430 GLY THR TRP THR THR LEU TRP LYS LEU PRO GLU MET ALA SEQRES 6 B 430 LYS ARG SER MET ALA LYS VAL PHE TYR LEU GLU LYS HIS SEQRES 7 B 430 GLY GLU GLY TYR ILE ALA LYS ILE ALA TYR PRO LEU THR SEQRES 8 B 430 LEU PHE GLU GLU GLY SER LEU VAL GLN LEU PHE SER ALA SEQRES 9 B 430 VAL ALA GLY ASN VAL PHE GLY MET LYS ALA LEU LYS ASN SEQRES 10 B 430 LEU ARG LEU LEU ASP PHE HIS PRO PRO TYR GLU TYR LEU SEQRES 11 B 430 ARG HIS PHE LYS GLY PRO GLN PHE GLY VAL GLN GLY ILE SEQRES 12 B 430 ARG GLU PHE MET GLY VAL LYS ASP ARG PRO LEU THR ALA SEQRES 13 B 430 THR VAL PRO LYS PRO LYS MET GLY TRP SER VAL GLU GLU SEQRES 14 B 430 TYR ALA GLU ILE ALA TYR GLU LEU TRP SER GLY GLY ILE SEQRES 15 B 430 ASP LEU LEU LYS ASP ASP GLU ASN PHE THR SER PHE PRO SEQRES 16 B 430 PHE ASN ARG PHE GLU GLU ARG VAL ARG LYS LEU TYR ARG SEQRES 17 B 430 VAL ARG ASP ARG VAL GLU ALA GLU THR GLY GLU THR LYS SEQRES 18 B 430 GLU TYR LEU ILE ASN ILE THR GLY PRO VAL ASN ILE MET SEQRES 19 B 430 GLU LYS ARG ALA GLU MET VAL ALA ASN GLU GLY GLY GLN SEQRES 20 B 430 TYR VAL MET ILE ASP ILE VAL VAL ALA GLY TRP SER ALA SEQRES 21 B 430 LEU GLN TYR MET ARG GLU VAL THR GLU ASP LEU GLY LEU SEQRES 22 B 430 ALA ILE HIS ALA HIS ARG ALA MET HIS ALA ALA PHE THR SEQRES 23 B 430 ARG ASN PRO ARG HIS GLY ILE THR MET LEU ALA LEU ALA SEQRES 24 B 430 LYS ALA ALA ARG MET ILE GLY VAL ASP GLN ILE HIS THR SEQRES 25 B 430 GLY THR ALA VAL GLY LYS MET ALA GLY ASN TYR GLU GLU SEQRES 26 B 430 ILE LYS ARG ILE ASN ASP PHE LEU LEU SER LYS TRP GLU SEQRES 27 B 430 HIS ILE ARG PRO VAL PHE PRO VAL ALA SER GLY GLY LEU SEQRES 28 B 430 HIS PRO GLY LEU MET PRO GLU LEU ILE ARG LEU PHE GLY SEQRES 29 B 430 LYS ASP LEU VAL ILE GLN ALA GLY GLY GLY VAL MET GLY SEQRES 30 B 430 HIS PRO ASP GLY PRO ARG ALA GLY ALA LYS ALA LEU ARG SEQRES 31 B 430 ASP ALA ILE ASP ALA ALA ILE GLU GLY VAL ASP LEU ASP SEQRES 32 B 430 GLU LYS ALA LYS SER SER PRO GLU LEU LYS LYS SER LEU SEQRES 33 B 430 ARG GLU VAL GLY LEU SER LYS ALA LYS VAL GLY VAL GLN SEQRES 34 B 430 HIS SEQRES 1 C 430 MET MET VAL LEU ARG MET LYS VAL GLU TRP TYR LEU ASP SEQRES 2 C 430 PHE VAL ASP LEU ASN TYR GLU PRO GLY ARG ASP GLU LEU SEQRES 3 C 430 ILE VAL GLU TYR TYR PHE GLU PRO ASN GLY VAL SER PRO SEQRES 4 C 430 GLU GLU ALA ALA GLY ARG ILE ALA SER GLU SER SER ILE SEQRES 5 C 430 GLY THR TRP THR THR LEU TRP LYS LEU PRO GLU MET ALA SEQRES 6 C 430 LYS ARG SER MET ALA LYS VAL PHE TYR LEU GLU LYS HIS SEQRES 7 C 430 GLY GLU GLY TYR ILE ALA LYS ILE ALA TYR PRO LEU THR SEQRES 8 C 430 LEU PHE GLU GLU GLY SER LEU VAL GLN LEU PHE SER ALA SEQRES 9 C 430 VAL ALA GLY ASN VAL PHE GLY MET LYS ALA LEU LYS ASN SEQRES 10 C 430 LEU ARG LEU LEU ASP PHE HIS PRO PRO TYR GLU TYR LEU SEQRES 11 C 430 ARG HIS PHE LYS GLY PRO GLN PHE GLY VAL GLN GLY ILE SEQRES 12 C 430 ARG GLU PHE MET GLY VAL LYS ASP ARG PRO LEU THR ALA SEQRES 13 C 430 THR VAL PRO LYS PRO LYS MET GLY TRP SER VAL GLU GLU SEQRES 14 C 430 TYR ALA GLU ILE ALA TYR GLU LEU TRP SER GLY GLY ILE SEQRES 15 C 430 ASP LEU LEU LYS ASP ASP GLU ASN PHE THR SER PHE PRO SEQRES 16 C 430 PHE ASN ARG PHE GLU GLU ARG VAL ARG LYS LEU TYR ARG SEQRES 17 C 430 VAL ARG ASP ARG VAL GLU ALA GLU THR GLY GLU THR LYS SEQRES 18 C 430 GLU TYR LEU ILE ASN ILE THR GLY PRO VAL ASN ILE MET SEQRES 19 C 430 GLU LYS ARG ALA GLU MET VAL ALA ASN GLU GLY GLY GLN SEQRES 20 C 430 TYR VAL MET ILE ASP ILE VAL VAL ALA GLY TRP SER ALA SEQRES 21 C 430 LEU GLN TYR MET ARG GLU VAL THR GLU ASP LEU GLY LEU SEQRES 22 C 430 ALA ILE HIS ALA HIS ARG ALA MET HIS ALA ALA PHE THR SEQRES 23 C 430 ARG ASN PRO ARG HIS GLY ILE THR MET LEU ALA LEU ALA SEQRES 24 C 430 LYS ALA ALA ARG MET ILE GLY VAL ASP GLN ILE HIS THR SEQRES 25 C 430 GLY THR ALA VAL GLY LYS MET ALA GLY ASN TYR GLU GLU SEQRES 26 C 430 ILE LYS ARG ILE ASN ASP PHE LEU LEU SER LYS TRP GLU SEQRES 27 C 430 HIS ILE ARG PRO VAL PHE PRO VAL ALA SER GLY GLY LEU SEQRES 28 C 430 HIS PRO GLY LEU MET PRO GLU LEU ILE ARG LEU PHE GLY SEQRES 29 C 430 LYS ASP LEU VAL ILE GLN ALA GLY GLY GLY VAL MET GLY SEQRES 30 C 430 HIS PRO ASP GLY PRO ARG ALA GLY ALA LYS ALA LEU ARG SEQRES 31 C 430 ASP ALA ILE ASP ALA ALA ILE GLU GLY VAL ASP LEU ASP SEQRES 32 C 430 GLU LYS ALA LYS SER SER PRO GLU LEU LYS LYS SER LEU SEQRES 33 C 430 ARG GLU VAL GLY LEU SER LYS ALA LYS VAL GLY VAL GLN SEQRES 34 C 430 HIS SEQRES 1 D 430 MET MET VAL LEU ARG MET LYS VAL GLU TRP TYR LEU ASP SEQRES 2 D 430 PHE VAL ASP LEU ASN TYR GLU PRO GLY ARG ASP GLU LEU SEQRES 3 D 430 ILE VAL GLU TYR TYR PHE GLU PRO ASN GLY VAL SER PRO SEQRES 4 D 430 GLU GLU ALA ALA GLY ARG ILE ALA SER GLU SER SER ILE SEQRES 5 D 430 GLY THR TRP THR THR LEU TRP LYS LEU PRO GLU MET ALA SEQRES 6 D 430 LYS ARG SER MET ALA LYS VAL PHE TYR LEU GLU LYS HIS SEQRES 7 D 430 GLY GLU GLY TYR ILE ALA LYS ILE ALA TYR PRO LEU THR SEQRES 8 D 430 LEU PHE GLU GLU GLY SER LEU VAL GLN LEU PHE SER ALA SEQRES 9 D 430 VAL ALA GLY ASN VAL PHE GLY MET LYS ALA LEU LYS ASN SEQRES 10 D 430 LEU ARG LEU LEU ASP PHE HIS PRO PRO TYR GLU TYR LEU SEQRES 11 D 430 ARG HIS PHE LYS GLY PRO GLN PHE GLY VAL GLN GLY ILE SEQRES 12 D 430 ARG GLU PHE MET GLY VAL LYS ASP ARG PRO LEU THR ALA SEQRES 13 D 430 THR VAL PRO LYS PRO LYS MET GLY TRP SER VAL GLU GLU SEQRES 14 D 430 TYR ALA GLU ILE ALA TYR GLU LEU TRP SER GLY GLY ILE SEQRES 15 D 430 ASP LEU LEU LYS ASP ASP GLU ASN PHE THR SER PHE PRO SEQRES 16 D 430 PHE ASN ARG PHE GLU GLU ARG VAL ARG LYS LEU TYR ARG SEQRES 17 D 430 VAL ARG ASP ARG VAL GLU ALA GLU THR GLY GLU THR LYS SEQRES 18 D 430 GLU TYR LEU ILE ASN ILE THR GLY PRO VAL ASN ILE MET SEQRES 19 D 430 GLU LYS ARG ALA GLU MET VAL ALA ASN GLU GLY GLY GLN SEQRES 20 D 430 TYR VAL MET ILE ASP ILE VAL VAL ALA GLY TRP SER ALA SEQRES 21 D 430 LEU GLN TYR MET ARG GLU VAL THR GLU ASP LEU GLY LEU SEQRES 22 D 430 ALA ILE HIS ALA HIS ARG ALA MET HIS ALA ALA PHE THR SEQRES 23 D 430 ARG ASN PRO ARG HIS GLY ILE THR MET LEU ALA LEU ALA SEQRES 24 D 430 LYS ALA ALA ARG MET ILE GLY VAL ASP GLN ILE HIS THR SEQRES 25 D 430 GLY THR ALA VAL GLY LYS MET ALA GLY ASN TYR GLU GLU SEQRES 26 D 430 ILE LYS ARG ILE ASN ASP PHE LEU LEU SER LYS TRP GLU SEQRES 27 D 430 HIS ILE ARG PRO VAL PHE PRO VAL ALA SER GLY GLY LEU SEQRES 28 D 430 HIS PRO GLY LEU MET PRO GLU LEU ILE ARG LEU PHE GLY SEQRES 29 D 430 LYS ASP LEU VAL ILE GLN ALA GLY GLY GLY VAL MET GLY SEQRES 30 D 430 HIS PRO ASP GLY PRO ARG ALA GLY ALA LYS ALA LEU ARG SEQRES 31 D 430 ASP ALA ILE ASP ALA ALA ILE GLU GLY VAL ASP LEU ASP SEQRES 32 D 430 GLU LYS ALA LYS SER SER PRO GLU LEU LYS LYS SER LEU SEQRES 33 D 430 ARG GLU VAL GLY LEU SER LYS ALA LYS VAL GLY VAL GLN SEQRES 34 D 430 HIS FORMUL 5 HOH *204(H2 O) HELIX 1 1 SER A 38 SER A 50 1 13 HELIX 2 2 PRO A 62 LYS A 66 5 5 HELIX 3 3 SER A 97 ALA A 106 1 10 HELIX 4 4 PRO A 126 ARG A 131 1 6 HELIX 5 5 PHE A 138 GLY A 148 1 11 HELIX 6 6 SER A 166 GLY A 181 1 16 HELIX 7 7 ARG A 198 GLY A 218 1 21 HELIX 8 8 PRO A 230 GLU A 244 1 15 HELIX 9 9 ASP A 252 GLY A 257 1 6 HELIX 10 10 GLY A 257 GLY A 272 1 16 HELIX 11 11 MET A 281 PHE A 285 5 5 HELIX 12 12 THR A 294 ILE A 305 1 12 HELIX 13 13 ASN A 322 SER A 335 1 14 HELIX 14 14 LEU A 355 GLY A 364 1 10 HELIX 15 15 ALA A 371 GLY A 377 1 7 HELIX 16 16 GLY A 381 GLU A 398 1 18 HELIX 17 17 ASP A 401 ALA A 406 1 6 HELIX 18 18 SER A 409 LEU A 421 1 13 SHEET 1 A 5 LYS A 71 HIS A 78 0 SHEET 2 A 5 GLY A 81 PRO A 89 -1 O ALA A 87 N LYS A 71 SHEET 3 A 5 GLU A 25 PRO A 34 -1 N LEU A 26 O TYR A 88 SHEET 4 A 5 LEU A 115 HIS A 124 -1 O ARG A 119 N TYR A 31 SHEET 5 A 5 GLY A 292 ILE A 293 1 O GLY A 292 N LEU A 120 SHEET 1 B 6 GLU A 222 LEU A 224 0 SHEET 2 B 6 LEU A 184 LYS A 186 1 N LEU A 185 O LEU A 224 SHEET 3 B 6 LEU A 154 THR A 157 1 N THR A 155 O LEU A 184 SHEET 4 B 6 VAL A 368 GLN A 370 1 O ILE A 369 N LEU A 154 SHEET 5 B 6 PRO A 345 SER A 348 1 N ALA A 347 O VAL A 368 SHEET 6 B 6 ILE A 310 HIS A 311 1 N ILE A 310 O VAL A 346 SHEET 1 C 2 TYR A 248 ILE A 251 0 SHEET 2 C 2 ALA A 274 ALA A 277 1 O HIS A 276 N ILE A 251 CISPEP 1 LYS A 160 PRO A 161 0 0.02 CISPEP 2 LYS B 160 PRO B 161 0 -0.03 CISPEP 3 LYS C 160 PRO C 161 0 -0.02 CISPEP 4 LYS D 160 PRO D 161 0 0.09 CRYST1 171.478 149.207 107.461 90.00 127.37 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005832 0.000000 0.004453 0.00000 SCALE2 0.000000 0.006702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011709 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.250050 0.863740 -0.437520 -30.09503 1 MTRIX2 2 -0.866420 -0.002100 -0.499310 34.80614 1 MTRIX3 2 -0.432190 0.503930 0.747840 -17.49799 1 MTRIX1 3 -0.250730 0.864320 0.435990 -30.10256 1 MTRIX2 3 0.868390 0.001770 0.495890 34.89288 1 MTRIX3 3 0.427830 0.502940 -0.751000 -17.44243 1 MTRIX1 4 -0.492800 0.005350 -0.870120 -0.05093 1 MTRIX2 4 0.000240 -0.999980 -0.006280 69.68140 1 MTRIX3 4 -0.870140 -0.003300 0.492790 -0.02970 1