PDB Short entry for 2DEY HEADER HYDROLASE 18-FEB-06 2DEY TITLE CRYSTAL STRUCTURE OF HUMAN PEPTIDYLARGININE DEIMINASE 4 IN COMPLEX TITLE 2 WITH HISTONE H4 N-TERMINAL TAIL INCLUDING ARG3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN-ARGININE DEIMINASE TYPE IV; COMPND 3 CHAIN: X; COMPND 4 SYNONYM: PEPTIDYLARGININE DEIMINASE IV, HL-60 PAD, PEPTIDYLARGININE COMPND 5 DEIMINASE 4; COMPND 6 EC: 3.5.3.15; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: 10-MER PEPTIDE FROM HISTONE H4; COMPND 11 CHAIN: A; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PADI4, PADI5, PDI5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. KEYWDS HISTONE MODIFICATION ENZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.ARITA,T.SHIMIZU,H.HASHIMOTO,Y.HIDAKA,M.YAMADA,M.SATO REVDAT 5 25-OCT-23 2DEY 1 REMARK REVDAT 4 10-NOV-21 2DEY 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2DEY 1 VERSN REVDAT 2 24-FEB-09 2DEY 1 VERSN REVDAT 1 11-APR-06 2DEY 0 JRNL AUTH K.ARITA,T.SHIMIZU,H.HASHIMOTO,Y.HIDAKA,M.YAMADA,M.SATO JRNL TITL STRUCTURAL BASIS FOR HISTONE N-TERMINAL RECOGNITION BY HUMAN JRNL TITL 2 PEPTIDYLARGININE DEIMINASE 4 JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 5291 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16567635 JRNL DOI 10.1073/PNAS.0509639103 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 35325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3918 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2574 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 274 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4980 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 154 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.67000 REMARK 3 B22 (A**2) : 4.30000 REMARK 3 B33 (A**2) : -3.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.39000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.277 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.222 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.194 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.427 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5111 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4610 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6935 ; 1.622 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10787 ; 0.872 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 627 ; 7.397 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 222 ;37.356 ;24.505 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 876 ;19.015 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;20.837 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 771 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5594 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 982 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1000 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4815 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2388 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3066 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 216 ; 0.167 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.065 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 16 ; 0.112 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.121 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.145 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.448 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3268 ; 0.748 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1266 ; 0.134 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5146 ; 1.228 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2111 ; 1.599 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1789 ; 2.444 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 4 X 663 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4467 34.5896 0.8419 REMARK 3 T TENSOR REMARK 3 T11: -0.1344 T22: -0.1337 REMARK 3 T33: -0.0819 T12: 0.0119 REMARK 3 T13: 0.0242 T23: 0.0539 REMARK 3 L TENSOR REMARK 3 L11: 1.2857 L22: 0.1635 REMARK 3 L33: 3.9697 L12: 0.0926 REMARK 3 L13: 1.4489 L23: 0.3986 REMARK 3 S TENSOR REMARK 3 S11: -0.0236 S12: 0.2165 S13: 0.1044 REMARK 3 S21: 0.0145 S22: -0.0507 S23: -0.0775 REMARK 3 S31: 0.1108 S32: 0.5998 S33: 0.0743 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2DEY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000025337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 273 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : BENDING MAGNET REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39243 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 33.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1WDA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE (PH8.0), 0.2M LITHIUM REMARK 280 SULFATE, 10% PEGMME2000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.09600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.30550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.09600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.30550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND PART OF THE BIOLOGICAL ASSEMBLY IS GENERATED REMARK 300 BY THE TWO FOLD AXIS: -X, Y, -Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY X -7 REMARK 465 PRO X -6 REMARK 465 LEU X -5 REMARK 465 GLY X -4 REMARK 465 SER X -3 REMARK 465 PRO X -2 REMARK 465 GLU X -1 REMARK 465 PHE X 0 REMARK 465 MET X 1 REMARK 465 ALA X 2 REMARK 465 GLN X 3 REMARK 465 GLU X 35 REMARK 465 ASP X 36 REMARK 465 ALA X 53 REMARK 465 HIS X 54 REMARK 465 SER X 55 REMARK 465 PRO X 56 REMARK 465 PRO X 57 REMARK 465 ALA X 58 REMARK 465 LYS X 59 REMARK 465 LYS X 60 REMARK 465 LYS X 61 REMARK 465 SER X 62 REMARK 465 THR X 63 REMARK 465 GLY X 64 REMARK 465 SER X 65 REMARK 465 SER X 66 REMARK 465 VAL X 127 REMARK 465 LYS X 128 REMARK 465 PRO X 129 REMARK 465 THR X 130 REMARK 465 ARG X 131 REMARK 465 ALA X 132 REMARK 465 VAL X 133 REMARK 465 LYS X 134 REMARK 465 ASP X 135 REMARK 465 ARG X 218 REMARK 465 GLY X 219 REMARK 465 LYS X 220 REMARK 465 LEU X 221 REMARK 465 SER X 222 REMARK 465 SER X 223 REMARK 465 LYS X 224 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 465 LEU A 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU X 340 O HOH X 998 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH X 1060 O HOH X 1060 2656 2.10 REMARK 500 OE1 GLU X 281 OH TYR X 435 2555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS X 311 CB CYS X 311 SG -0.106 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL X 203 CB - CA - C ANGL. DEV. = -14.5 DEGREES REMARK 500 ARG X 372 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 VAL X 412 CB - CA - C ANGL. DEV. = -14.0 DEGREES REMARK 500 GLN X 455 CB - CA - C ANGL. DEV. = -12.4 DEGREES REMARK 500 ARG X 650 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG X 650 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU X 70 45.68 -84.83 REMARK 500 LYS X 100 23.53 -146.61 REMARK 500 THR X 124 -77.12 -131.82 REMARK 500 ARG X 137 60.01 -61.55 REMARK 500 TRP X 233 75.33 -150.80 REMARK 500 ILE X 313 93.84 -68.92 REMARK 500 PHE X 314 -151.64 -159.48 REMARK 500 GLU X 317 -37.27 -163.78 REMARK 500 LYS X 362 133.11 -171.72 REMARK 500 ARG X 374 -149.89 -108.41 REMARK 500 PRO X 415 151.62 -47.58 REMARK 500 ARG X 419 41.08 33.03 REMARK 500 GLN X 455 25.96 42.98 REMARK 500 ALA X 458 90.87 -2.53 REMARK 500 ASP X 483 -161.03 -126.34 REMARK 500 ARG X 484 -87.74 7.78 REMARK 500 PHE X 515 33.11 75.86 REMARK 500 LYS X 519 -72.87 -43.71 REMARK 500 LYS X 574 -126.09 -132.51 REMARK 500 ASN X 585 95.06 -68.11 REMARK 500 LEU X 592 66.80 -117.41 REMARK 500 PRO X 622 -9.92 -59.13 REMARK 500 GLU X 642 -142.80 -130.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN X 153 OD1 REMARK 620 2 ASP X 155 OD1 81.9 REMARK 620 3 ASP X 157 OD2 161.7 95.8 REMARK 620 4 ASP X 165 OD2 115.7 93.1 82.4 REMARK 620 5 ASP X 176 OD1 84.4 165.2 99.0 87.6 REMARK 620 6 ASP X 179 OD2 90.5 85.1 71.2 153.3 100.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 902 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP X 155 OD2 REMARK 620 2 ASP X 157 OD1 76.1 REMARK 620 3 ASP X 157 OD2 84.6 46.1 REMARK 620 4 ASP X 179 OD1 106.8 165.3 119.3 REMARK 620 5 ASP X 179 OD2 88.8 116.0 71.1 50.5 REMARK 620 6 ASP X 388 OD1 92.4 92.1 137.6 102.1 151.3 REMARK 620 7 HOH X1024 O 157.0 81.5 76.0 93.5 96.3 93.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 904 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP X 165 O REMARK 620 2 ASP X 168 OD1 82.9 REMARK 620 3 GLU X 170 O 169.4 86.4 REMARK 620 4 HOH X1017 O 86.4 86.7 93.6 REMARK 620 5 HOH X1028 O 83.8 158.0 106.5 75.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 900 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN X 349 OE1 REMARK 620 2 GLU X 353 OE1 139.1 REMARK 620 3 PHE X 407 O 91.7 99.3 REMARK 620 4 LEU X 410 O 143.8 76.8 84.1 REMARK 620 5 GLU X 411 OE1 74.3 138.1 104.8 72.2 REMARK 620 6 HOH X 928 O 94.6 69.5 168.1 96.6 86.7 REMARK 620 7 HOH X1034 O 70.2 73.2 79.8 143.0 144.3 92.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 903 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU X 351 OE1 REMARK 620 2 ASP X 369 OD1 79.4 REMARK 620 3 SER X 370 O 83.8 72.0 REMARK 620 4 ASN X 373 OD1 115.6 161.3 118.8 REMARK 620 5 HOH X1040 O 99.4 74.2 144.8 91.6 REMARK 620 6 HOH X1058 O 153.9 80.0 74.6 88.1 90.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA X 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA X 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA X 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA X 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA X 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 X 907 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2DEW RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH HISTONE H3 N-TERMINAL TAIL REMARK 900 INCLUDING ARG8 REMARK 900 RELATED ID: 2DEX RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH HISTONE H3 N-TERMINAL PEPTIDE REMARK 900 INCLUDING ARG17 DBREF 2DEY X 1 663 UNP Q9UM07 PADI4_HUMAN 1 663 DBREF 2DEY A 0 10 PDB 2DEY 2DEY 0 10 SEQADV 2DEY GLY X -7 UNP Q9UM07 CLONING ARTIFACT SEQADV 2DEY PRO X -6 UNP Q9UM07 CLONING ARTIFACT SEQADV 2DEY LEU X -5 UNP Q9UM07 CLONING ARTIFACT SEQADV 2DEY GLY X -4 UNP Q9UM07 CLONING ARTIFACT SEQADV 2DEY SER X -3 UNP Q9UM07 CLONING ARTIFACT SEQADV 2DEY PRO X -2 UNP Q9UM07 CLONING ARTIFACT SEQADV 2DEY GLU X -1 UNP Q9UM07 CLONING ARTIFACT SEQADV 2DEY PHE X 0 UNP Q9UM07 CLONING ARTIFACT SEQADV 2DEY ALA X 645 UNP Q9UM07 CYS 645 ENGINEERED MUTATION SEQRES 1 X 671 GLY PRO LEU GLY SER PRO GLU PHE MET ALA GLN GLY THR SEQRES 2 X 671 LEU ILE ARG VAL THR PRO GLU GLN PRO THR HIS ALA VAL SEQRES 3 X 671 CYS VAL LEU GLY THR LEU THR GLN LEU ASP ILE CYS SER SEQRES 4 X 671 SER ALA PRO GLU ASP CYS THR SER PHE SER ILE ASN ALA SEQRES 5 X 671 SER PRO GLY VAL VAL VAL ASP ILE ALA HIS SER PRO PRO SEQRES 6 X 671 ALA LYS LYS LYS SER THR GLY SER SER THR TRP PRO LEU SEQRES 7 X 671 ASP PRO GLY VAL GLU VAL THR LEU THR MET LYS ALA ALA SEQRES 8 X 671 SER GLY SER THR GLY ASP GLN LYS VAL GLN ILE SER TYR SEQRES 9 X 671 TYR GLY PRO LYS THR PRO PRO VAL LYS ALA LEU LEU TYR SEQRES 10 X 671 LEU THR ALA VAL GLU ILE SER LEU CYS ALA ASP ILE THR SEQRES 11 X 671 ARG THR GLY LYS VAL LYS PRO THR ARG ALA VAL LYS ASP SEQRES 12 X 671 GLN ARG THR TRP THR TRP GLY PRO CYS GLY GLN GLY ALA SEQRES 13 X 671 ILE LEU LEU VAL ASN CYS ASP ARG ASP ASN LEU GLU SER SEQRES 14 X 671 SER ALA MET ASP CYS GLU ASP ASP GLU VAL LEU ASP SER SEQRES 15 X 671 GLU ASP LEU GLN ASP MET SER LEU MET THR LEU SER THR SEQRES 16 X 671 LYS THR PRO LYS ASP PHE PHE THR ASN HIS THR LEU VAL SEQRES 17 X 671 LEU HIS VAL ALA ARG SER GLU MET ASP LYS VAL ARG VAL SEQRES 18 X 671 PHE GLN ALA THR ARG GLY LYS LEU SER SER LYS CYS SER SEQRES 19 X 671 VAL VAL LEU GLY PRO LYS TRP PRO SER HIS TYR LEU MET SEQRES 20 X 671 VAL PRO GLY GLY LYS HIS ASN MET ASP PHE TYR VAL GLU SEQRES 21 X 671 ALA LEU ALA PHE PRO ASP THR ASP PHE PRO GLY LEU ILE SEQRES 22 X 671 THR LEU THR ILE SER LEU LEU ASP THR SER ASN LEU GLU SEQRES 23 X 671 LEU PRO GLU ALA VAL VAL PHE GLN ASP SER VAL VAL PHE SEQRES 24 X 671 ARG VAL ALA PRO TRP ILE MET THR PRO ASN THR GLN PRO SEQRES 25 X 671 PRO GLN GLU VAL TYR ALA CYS SER ILE PHE GLU ASN GLU SEQRES 26 X 671 ASP PHE LEU LYS SER VAL THR THR LEU ALA MET LYS ALA SEQRES 27 X 671 LYS CYS LYS LEU THR ILE CYS PRO GLU GLU GLU ASN MET SEQRES 28 X 671 ASP ASP GLN TRP MET GLN ASP GLU MET GLU ILE GLY TYR SEQRES 29 X 671 ILE GLN ALA PRO HIS LYS THR LEU PRO VAL VAL PHE ASP SEQRES 30 X 671 SER PRO ARG ASN ARG GLY LEU LYS GLU PHE PRO ILE LYS SEQRES 31 X 671 ARG VAL MET GLY PRO ASP PHE GLY TYR VAL THR ARG GLY SEQRES 32 X 671 PRO GLN THR GLY GLY ILE SER GLY LEU ASP SER PHE GLY SEQRES 33 X 671 ASN LEU GLU VAL SER PRO PRO VAL THR VAL ARG GLY LYS SEQRES 34 X 671 GLU TYR PRO LEU GLY ARG ILE LEU PHE GLY ASP SER CYS SEQRES 35 X 671 TYR PRO SER ASN ASP SER ARG GLN MET HIS GLN ALA LEU SEQRES 36 X 671 GLN ASP PHE LEU SER ALA GLN GLN VAL GLN ALA PRO VAL SEQRES 37 X 671 LYS LEU TYR SER ASP TRP LEU SER VAL GLY HIS VAL ASP SEQRES 38 X 671 GLU PHE LEU SER PHE VAL PRO ALA PRO ASP ARG LYS GLY SEQRES 39 X 671 PHE ARG LEU LEU LEU ALA SER PRO ARG SER CYS TYR LYS SEQRES 40 X 671 LEU PHE GLN GLU GLN GLN ASN GLU GLY HIS GLY GLU ALA SEQRES 41 X 671 LEU LEU PHE GLU GLY ILE LYS LYS LYS LYS GLN GLN LYS SEQRES 42 X 671 ILE LYS ASN ILE LEU SER ASN LYS THR LEU ARG GLU HIS SEQRES 43 X 671 ASN SER PHE VAL GLU ARG CYS ILE ASP TRP ASN ARG GLU SEQRES 44 X 671 LEU LEU LYS ARG GLU LEU GLY LEU ALA GLU SER ASP ILE SEQRES 45 X 671 ILE ASP ILE PRO GLN LEU PHE LYS LEU LYS GLU PHE SER SEQRES 46 X 671 LYS ALA GLU ALA PHE PHE PRO ASN MET VAL ASN MET LEU SEQRES 47 X 671 VAL LEU GLY LYS HIS LEU GLY ILE PRO LYS PRO PHE GLY SEQRES 48 X 671 PRO VAL ILE ASN GLY ARG CYS CYS LEU GLU GLU LYS VAL SEQRES 49 X 671 CYS SER LEU LEU GLU PRO LEU GLY LEU GLN CYS THR PHE SEQRES 50 X 671 ILE ASN ASP PHE PHE THR TYR HIS ILE ARG HIS GLY GLU SEQRES 51 X 671 VAL HIS ALA GLY THR ASN VAL ARG ARG LYS PRO PHE SER SEQRES 52 X 671 PHE LYS TRP TRP ASN MET VAL PRO SEQRES 1 A 11 ACE SER GLY ARG GLY LYS GLY GLY LYS GLY LEU HET ACE A 0 3 HET CA X 900 1 HET CA X 901 1 HET CA X 902 1 HET CA X 903 1 HET CA X 904 1 HET SO4 X 905 5 HET SO4 X 906 5 HET SO4 X 907 5 HETNAM ACE ACETYL GROUP HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION FORMUL 2 ACE C2 H4 O FORMUL 3 CA 5(CA 2+) FORMUL 8 SO4 3(O4 S 2-) FORMUL 11 HOH *154(H2 O) HELIX 1 1 MET X 164 ASP X 168 5 5 HELIX 2 2 ASP X 173 ASP X 179 5 7 HELIX 3 3 ASP X 192 THR X 195 5 4 HELIX 4 4 GLU X 207 ASP X 209 5 3 HELIX 5 5 GLU X 317 ALA X 330 1 14 HELIX 6 6 PRO X 338 MET X 343 1 6 HELIX 7 7 GLU X 378 ARG X 383 1 6 HELIX 8 8 SER X 402 GLY X 408 5 7 HELIX 9 9 HIS X 444 GLN X 454 1 11 HELIX 10 10 HIS X 471 GLU X 474 5 4 HELIX 11 11 PRO X 494 GLU X 507 1 14 HELIX 12 12 ILE X 526 ASN X 532 1 7 HELIX 13 13 ASN X 532 GLY X 558 1 27 HELIX 14 14 ALA X 560 SER X 562 5 3 HELIX 15 15 GLU X 575 SER X 577 5 3 HELIX 16 16 CYS X 610 GLU X 621 1 12 HELIX 17 17 PRO X 622 GLY X 624 5 3 HELIX 18 18 TYR X 636 HIS X 640 5 5 HELIX 19 19 LYS X 657 MET X 661 5 5 SHEET 1 A 4 THR X 5 ARG X 8 0 SHEET 2 A 4 THR X 25 ASP X 28 1 O ASP X 28 N ILE X 7 SHEET 3 A 4 THR X 77 MET X 80 -1 O LEU X 78 N THR X 25 SHEET 4 A 4 VAL X 48 ASP X 51 -1 N VAL X 49 O THR X 79 SHEET 1 B 5 THR X 15 VAL X 20 0 SHEET 2 B 5 VAL X 104 CYS X 118 1 O TYR X 109 N THR X 15 SHEET 3 B 5 GLN X 90 TYR X 97 -1 N TYR X 96 O VAL X 104 SHEET 4 B 5 SER X 39 ALA X 44 -1 N ASN X 43 O GLN X 93 SHEET 5 B 5 TRP X 68 PRO X 69 -1 O TRP X 68 N PHE X 40 SHEET 1 C 6 THR X 15 VAL X 20 0 SHEET 2 C 6 VAL X 104 CYS X 118 1 O TYR X 109 N THR X 15 SHEET 3 C 6 SER X 181 THR X 189 -1 O THR X 184 N CYS X 118 SHEET 4 C 6 GLY X 243 ALA X 253 -1 O PHE X 249 N MET X 183 SHEET 5 C 6 VAL X 211 ALA X 216 -1 N PHE X 214 O TYR X 250 SHEET 6 C 6 SER X 226 LEU X 229 -1 O SER X 226 N GLN X 215 SHEET 1 D 5 ALA X 148 LEU X 150 0 SHEET 2 D 5 ALA X 282 VAL X 293 1 O ARG X 292 N LEU X 150 SHEET 3 D 5 LEU X 264 ASP X 273 -1 N ILE X 265 O PHE X 291 SHEET 4 D 5 HIS X 197 VAL X 203 -1 N THR X 198 O LEU X 272 SHEET 5 D 5 SER X 235 LEU X 238 -1 O LEU X 238 N LEU X 199 SHEET 1 E 3 LYS X 333 ILE X 336 0 SHEET 2 E 3 PRO X 305 ALA X 310 1 N VAL X 308 O THR X 335 SHEET 3 E 3 THR X 647 ARG X 651 -1 O ARG X 650 N GLN X 306 SHEET 1 F 3 MET X 352 ALA X 359 0 SHEET 2 F 3 LYS X 362 ASP X 369 -1 O PHE X 368 N GLU X 353 SHEET 3 F 3 GLY X 390 THR X 393 1 O GLY X 390 N PRO X 365 SHEET 1 G 3 LEU X 410 VAL X 412 0 SHEET 2 G 3 ILE X 428 ASP X 432 -1 O LEU X 429 N GLU X 411 SHEET 3 G 3 VAL X 460 TYR X 463 1 O LEU X 462 N PHE X 430 SHEET 1 H 2 VAL X 416 VAL X 418 0 SHEET 2 H 2 LYS X 421 TYR X 423 -1 O LYS X 421 N VAL X 418 SHEET 1 I 3 LEU X 476 PRO X 480 0 SHEET 2 I 3 PHE X 487 SER X 493 -1 O LEU X 490 N SER X 477 SHEET 3 I 3 ILE X 564 PRO X 568 1 O ILE X 565 N LEU X 489 SHEET 1 J 2 LEU X 513 LEU X 514 0 SHEET 2 J 2 GLN X 524 LYS X 525 -1 O GLN X 524 N LEU X 514 SHEET 1 K 2 PHE X 571 LEU X 573 0 SHEET 2 K 2 ALA X 579 ALA X 581 -1 O GLU X 580 N LYS X 572 SHEET 1 L 3 LEU X 590 LEU X 592 0 SHEET 2 L 3 HIS X 595 PRO X 599 -1 O HIS X 595 N LEU X 592 SHEET 3 L 3 GLN X 626 ILE X 630 1 O THR X 628 N ILE X 598 LINK C ACE A 0 N SER A 1 1555 1555 1.32 LINK OD1 ASN X 153 CA CA X 901 1555 1555 2.40 LINK OD1 ASP X 155 CA CA X 901 1555 1555 2.52 LINK OD2 ASP X 155 CA CA X 902 1555 1555 2.64 LINK OD2 ASP X 157 CA CA X 901 1555 1555 2.71 LINK OD1 ASP X 157 CA CA X 902 1555 1555 2.91 LINK OD2 ASP X 157 CA CA X 902 1555 1555 2.59 LINK OD2 ASP X 165 CA CA X 901 1555 1555 2.27 LINK O ASP X 165 CA CA X 904 1555 1555 2.38 LINK OD1 ASP X 168 CA CA X 904 1555 1555 2.26 LINK O GLU X 170 CA CA X 904 1555 1555 2.29 LINK OD1 ASP X 176 CA CA X 901 1555 1555 2.33 LINK OD2 ASP X 179 CA CA X 901 1555 1555 2.33 LINK OD1 ASP X 179 CA CA X 902 1555 1555 2.69 LINK OD2 ASP X 179 CA CA X 902 1555 1555 2.48 LINK OE1 GLN X 349 CA CA X 900 1555 1555 2.30 LINK OE1 GLU X 351 CA CA X 903 1555 1555 2.51 LINK OE1 GLU X 353 CA CA X 900 1555 1555 2.46 LINK OD1 ASP X 369 CA CA X 903 1555 1555 2.48 LINK O SER X 370 CA CA X 903 1555 1555 2.35 LINK OD1 ASN X 373 CA CA X 903 1555 1555 2.46 LINK OD1 ASP X 388 CA CA X 902 1555 1555 2.28 LINK O PHE X 407 CA CA X 900 1555 1555 2.24 LINK O LEU X 410 CA CA X 900 1555 1555 2.48 LINK OE1 GLU X 411 CA CA X 900 1555 1555 2.59 LINK CA CA X 900 O HOH X 928 1555 1555 2.37 LINK CA CA X 900 O HOH X1034 1555 1555 2.39 LINK CA CA X 902 O HOH X1024 1555 1555 2.23 LINK CA CA X 903 O HOH X1040 1555 1555 2.37 LINK CA CA X 903 O HOH X1058 1555 1555 2.58 LINK CA CA X 904 O HOH X1017 1555 1555 2.42 LINK CA CA X 904 O HOH X1028 1555 1555 2.39 SITE 1 AC1 7 GLN X 349 GLU X 353 PHE X 407 LEU X 410 SITE 2 AC1 7 GLU X 411 HOH X 928 HOH X1034 SITE 1 AC2 6 ASN X 153 ASP X 155 ASP X 157 ASP X 165 SITE 2 AC2 6 ASP X 176 ASP X 179 SITE 1 AC3 5 ASP X 155 ASP X 157 ASP X 179 ASP X 388 SITE 2 AC3 5 HOH X1024 SITE 1 AC4 6 GLU X 351 ASP X 369 SER X 370 ASN X 373 SITE 2 AC4 6 HOH X1040 HOH X1058 SITE 1 AC5 5 ASP X 165 ASP X 168 GLU X 170 HOH X1017 SITE 2 AC5 5 HOH X1028 SITE 1 AC6 4 LYS A 5 SER X 402 GLY X 403 ARG X 441 SITE 1 AC7 5 ARG X 495 SER X 496 LYS X 499 LYS X 615 SITE 2 AC7 5 HOH X 932 SITE 1 AC8 3 LYS X 525 LYS X 527 ASN X 528 CRYST1 146.192 60.611 115.203 90.00 124.18 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006840 0.000000 0.004644 0.00000 SCALE2 0.000000 0.016499 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010492 0.00000