PDB Short entry for 2DPG HEADER OXIDOREDUCTASE 17-APR-98 2DPG TITLE COMPLEX OF INACTIVE MUTANT (H240->N) OF GLUCOSE 6-PHOSPHATE TITLE 2 DEHYDROGENASE FROM LEUCONOSTOC MESENTEROIDES WITH NADP+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE 6-PHOSPHATE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: G6PD; COMPND 5 EC: 1.1.1.49; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: THE MUTANT IS INACTIVE, LACKING THE CATALYTIC BASE. COMPND 9 THE STRUCTURE CONTAINS A PARTIAL NADP BOUND TO NUCLEOTIDE BINDING COMPND 10 DOMAIN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEUCONOSTOC MESENTEROIDES; SOURCE 3 ORGANISM_TAXID: 1245; SOURCE 4 GENE: PLMZ/H240N; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: SU294; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PUC-19/HIS240ASNPLMZ; SOURCE 9 EXPRESSION_SYSTEM_GENE: PLMZ/H240N KEYWDS OXIDOREDUCTASE, CHOH(D) - NAD(P), NADP/NAD, GLUCOSE METABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR M.J.ADAMS,C.E.NAYLOR,S.PALUDIN,S.GOVER REVDAT 6 03-APR-24 2DPG 1 REMARK REVDAT 5 14-FEB-24 2DPG 1 REMARK REVDAT 4 03-NOV-21 2DPG 1 REMARK SEQADV ATOM REVDAT 3 13-JUL-11 2DPG 1 VERSN REVDAT 2 24-FEB-09 2DPG 1 VERSN REVDAT 1 15-JUL-98 2DPG 0 JRNL AUTH M.S.COSGROVE,C.NAYLOR,S.PALUDAN,M.J.ADAMS,H.R.LEVY JRNL TITL ON THE MECHANISM OF THE REACTION CATALYZED BY GLUCOSE JRNL TITL 2 6-PHOSPHATE DEHYDROGENASE. JRNL REF BIOCHEMISTRY V. 37 2759 1998 JRNL REFN ISSN 0006-2960 JRNL PMID 9485426 JRNL DOI 10.1021/BI972069Y REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.ROWLAND,A.K.BASAK,S.GOVER,H.R.LEVY,M.J.ADAMS REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF GLUCOSE 6-PHOSPHATE REMARK 1 TITL 2 DEHYDROGENASE FROM LEUCONOSTOC MESENTEROIDES REFINED AT 2.0 REMARK 1 TITL 3 A RESOLUTION REMARK 1 REF STRUCTURE V. 2 1073 1994 REMARK 1 REFN ISSN 0969-2126 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.J.ADAMS,A.K.BASAK,S.GOVER,P.ROWLAND,H.R.LEVY REMARK 1 TITL SITE-DIRECTED MUTAGENESIS TO FACILITATE X-RAY STRUCTURAL REMARK 1 TITL 2 STUDIES OF LEUCONOSTOC MESENTEROIDES GLUCOSE 6-PHOSPHATE REMARK 1 TITL 3 DEHYDROGENASE REMARK 1 REF PROTEIN SCI. V. 2 859 1993 REMARK 1 REFN ISSN 0961-8368 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 100000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 68.4 REMARK 3 NUMBER OF REFLECTIONS : 16244 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 789 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 55.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1220 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 60 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3838 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : 0.30 REMARK 3 LOW RESOLUTION CUTOFF (A) : 25.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.420 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.110 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.500 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.640 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.500 ; 1.500 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.640 ; 2.000 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM19.SOL REMARK 3 PARAMETER FILE 3 : 2-5-ABP.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : 2-5-ABP.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: FOR DETAILS OF THE BULK SOLVENT REMARK 3 MODELLING, SEE JRNL REFERENCE. REMARK 4 REMARK 4 2DPG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178009. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : DEC-94 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.5 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.876 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16263 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 68.4 REMARK 200 DATA REDUNDANCY : 1.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 0.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.41100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIGID-BODY, DIFFERENCE REMARK 200 FOURIER REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: INCOMPLETE REFINED STRUCTURE OF NATIVE PROTEIN REMARK 200 CONTAINING NADP REMARK 200 REMARK 200 REMARK: MERGE OF 2.5 ANGSTROM SRS DATA (EXPT 1) WITH 3.5 ANGSTROM REMARK 200 IN-HOUSE DATA (EXPT 2). FOR DETAILS, SEE JRNL REFERENCE. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HANGING DROP VAPOR DIFFUSION. 2+2 REMARK 280 MICROLITER DROPS. IN THE WELL 2.27M UNBUFFERED AMMONIUM SULFATE. REMARK 280 THE PROTEIN AT 4.8MG/ML IN 0.1M TRIS-HCL AT PH 7.5 WITH 0.5MM REMARK 280 NADP+ AND 25MM G6P., VAPOR DIFFUSION - HANGING DROP, VAPOR REMARK 280 DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.80000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.40000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 80.80000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.40000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.80000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.40000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 80.80000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.40000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 80.80000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1137 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 21 -54.52 -124.80 REMARK 500 GLN A 36 -83.93 -120.92 REMARK 500 ALA A 45 -175.38 -172.88 REMARK 500 SER A 117 56.49 -96.67 REMARK 500 GLU A 221 -99.65 51.21 REMARK 500 ARG A 223 15.04 -65.62 REMARK 500 PHE A 256 38.63 -96.66 REMARK 500 ASP A 293 -70.84 -108.18 REMARK 500 PHE A 297 70.64 -101.16 REMARK 500 PRO A 307 3.82 -55.20 REMARK 500 ALA A 308 -24.99 63.02 REMARK 500 ASP A 323 51.81 -90.49 REMARK 500 GLU A 328 108.78 -58.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAP A 799 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 799 DBREF 2DPG A 1 485 UNP P11411 G6PD_LEUME 1 485 SEQADV 2DPG ASN A 240 UNP P11411 HIS 240 ENGINEERED MUTATION SEQRES 1 A 485 VAL SER GLU ILE LYS THR LEU VAL THR PHE PHE GLY GLY SEQRES 2 A 485 THR GLY ASP LEU ALA LYS ARG LYS LEU TYR PRO SER VAL SEQRES 3 A 485 PHE ASN LEU TYR LYS LYS GLY TYR LEU GLN LYS HIS PHE SEQRES 4 A 485 ALA ILE VAL GLY THR ALA ARG GLN ALA LEU ASN ASP ASP SEQRES 5 A 485 GLU PHE LYS GLN LEU VAL ARG ASP SER ILE LYS ASP PHE SEQRES 6 A 485 THR ASP ASP GLN ALA GLN ALA GLU ALA PHE ILE GLU HIS SEQRES 7 A 485 PHE SER TYR ARG ALA HIS ASP VAL THR ASP ALA ALA SER SEQRES 8 A 485 TYR ALA VAL LEU LYS GLU ALA ILE GLU GLU ALA ALA ASP SEQRES 9 A 485 LYS PHE ASP ILE ASP GLY ASN ARG ILE PHE TYR MET SER SEQRES 10 A 485 VAL ALA PRO ARG PHE PHE GLY THR ILE ALA LYS TYR LEU SEQRES 11 A 485 LYS SER GLU GLY LEU LEU ALA ASP THR GLY TYR ASN ARG SEQRES 12 A 485 LEU MET ILE GLU LYS PRO PHE GLY THR SER TYR ASP THR SEQRES 13 A 485 ALA ALA GLU LEU GLN ASN ASP LEU GLU ASN ALA PHE ASP SEQRES 14 A 485 ASP ASN GLN LEU PHE ARG ILE ASP HIS TYR LEU GLY LYS SEQRES 15 A 485 GLU MET VAL GLN ASN ILE ALA ALA LEU ARG PHE GLY ASN SEQRES 16 A 485 PRO ILE PHE ASP ALA ALA TRP ASN LYS ASP TYR ILE LYS SEQRES 17 A 485 ASN VAL GLN VAL THR LEU SER GLU VAL LEU GLY VAL GLU SEQRES 18 A 485 GLU ARG ALA GLY TYR TYR ASP THR ALA GLY ALA LEU LEU SEQRES 19 A 485 ASP MET ILE GLN ASN ASN THR MET GLN ILE VAL GLY TRP SEQRES 20 A 485 LEU ALA MET GLU LYS PRO GLU SER PHE THR ASP LYS ASP SEQRES 21 A 485 ILE ARG ALA ALA LYS ASN ALA ALA PHE ASN ALA LEU LYS SEQRES 22 A 485 ILE TYR ASP GLU ALA GLU VAL ASN LYS TYR PHE VAL ARG SEQRES 23 A 485 ALA GLN TYR GLY ALA GLY ASP SER ALA ASP PHE LYS PRO SEQRES 24 A 485 TYR LEU GLU GLU LEU ASP VAL PRO ALA ASP SER LYS ASN SEQRES 25 A 485 ASN THR PHE ILE ALA GLY GLU LEU GLN PHE ASP LEU PRO SEQRES 26 A 485 ARG TRP GLU GLY VAL PRO PHE TYR VAL ARG SER GLY LYS SEQRES 27 A 485 ARG LEU ALA ALA LYS GLN THR ARG VAL ASP ILE VAL PHE SEQRES 28 A 485 LYS ALA GLY THR PHE ASN PHE GLY SER GLU GLN GLU ALA SEQRES 29 A 485 GLN GLU ALA VAL LEU SER ILE ILE ILE ASP PRO LYS GLY SEQRES 30 A 485 ALA ILE GLU LEU LYS LEU ASN ALA LYS SER VAL GLU ASP SEQRES 31 A 485 ALA PHE ASN THR ARG THR ILE ASP LEU GLY TRP THR VAL SEQRES 32 A 485 SER ASP GLU ASP LYS LYS ASN THR PRO GLU PRO TYR GLU SEQRES 33 A 485 ARG MET ILE HIS ASP THR MET ASN GLY ASP GLY SER ASN SEQRES 34 A 485 PHE ALA ASP TRP ASN GLY VAL SER ILE ALA TRP LYS PHE SEQRES 35 A 485 VAL ASP ALA ILE SER ALA VAL TYR THR ALA ASP LYS ALA SEQRES 36 A 485 PRO LEU GLU THR TYR LYS SER GLY SER MET GLY PRO GLU SEQRES 37 A 485 ALA SER ASP LYS LEU LEU ALA ALA ASN GLY ASP ALA TRP SEQRES 38 A 485 VAL PHE LYS GLY HET NAP A 799 31 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 HOH *74(H2 O) HELIX 1 A ASP A 16 LYS A 31 1SEE REMARK 650 16 HELIX 2 B ASP A 51 PHE A 65 1SEE REMARK 650 15 HELIX 3 B' GLN A 69 ILE A 76 1SEE REMARK 650 8 HELIX 4 C TYR A 92 LYS A 105 1SEE REMARK 650 14 HELIX 5 D PRO A 120 SER A 132 1SEE REMARK 650 13 HELIX 6 E TYR A 154 LEU A 164 1SEE REMARK 650 11 HELIX 7 F' HIS A 178 GLY A 181 5SEE REMARK 650 4 HELIX 8 F GLU A 183 PHE A 193 1SEE REMARK 650 11 HELIX 9 G PRO A 196 ASP A 199 1SEE REMARK 650 4 HELIX 10 H ALA A 224 ALA A 230 1SEE REMARK 650 7 HELIX 11 I ALA A 232 ALA A 249 1SEE REMARK 650 18 HELIX 12 J ASP A 258 PHE A 269 1SEE REMARK 650 12 HELIX 13 K GLU A 277 TYR A 283 1SEE REMARK 650 7 HELIX 14 L ASP A 405 ASN A 410 1SEE REMARK 650 6 HELIX 15 M PRO A 414 ASN A 424 1SEE REMARK 650 11 HELIX 16 N TRP A 433 THR A 451 1SEE REMARK 650 19 HELIX 17 O GLU A 468 LEU A 474 1SEE REMARK 650 7 SHEET 1 COE 6 HIS A 78 ALA A 83 0 SHEET 2 COE 6 HIS A 38 ALA A 45 1 N ALA A 45 O HIS A 78 SHEET 3 COE 6 THR A 6 PHE A 11 1 N THR A 6 O HIS A 38 SHEET 4 COE 6 ASN A 111 MET A 116 1 O ASN A 111 N LEU A 7 SHEET 5 COE 6 TYR A 141 ILE A 146 1 O TYR A 141 N ARG A 112 SHEET 6 COE 6 GLN A 172 ARG A 175 1 O GLN A 172 N LEU A 144 SHEET 1 DIM 9 THR A 394 THR A 402 0 SHEET 2 DIM 9 ALA A 378 LYS A 386 -1 N ILE A 379 O TRP A 401 SHEET 3 DIM 9 VAL A 368 ASP A 374 -1 N VAL A 368 O LYS A 382 SHEET 4 DIM 9 GLN A 344 PHE A 351 -1 O THR A 345 N ILE A 373 SHEET 5 DIM 9 ILE A 207 SER A 215 -1 O ASN A 209 N VAL A 350 SHEET 6 DIM 9 PHE A 332 GLY A 337 1 N TYR A 333 O VAL A 210 SHEET 7 DIM 9 PHE A 315 LEU A 320 -1 N ILE A 316 O SER A 336 SHEET 8 DIM 9 PHE A 284 TYR A 289 -1 N VAL A 285 O ALA A 317 SHEET 9 DIM 9 LEU A 457 TYR A 460 1 O GLU A 458 N GLN A 288 CISPEP 1 LYS A 148 PRO A 149 0 0.03 CISPEP 2 ASP A 374 PRO A 375 0 0.46 SITE 1 AC1 12 GLY A 12 THR A 14 GLY A 15 ASP A 16 SITE 2 AC1 12 LEU A 17 ALA A 45 ARG A 46 GLN A 47 SITE 3 AC1 12 HIS A 84 ASP A 85 VAL A 86 VAL A 118 CRYST1 136.700 136.700 121.200 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007315 0.004223 0.000000 0.00000 SCALE2 0.000000 0.008447 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008251 0.00000