PDB Short entry for 2DPL HEADER LIGASE 12-MAY-06 2DPL TITLE CRYSTAL STRUCTURE OF THE GMP SYNTHASE FROM PYROCOCCUS HORIKOSHII OT3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GMP SYNTHASE [GLUTAMINE-HYDROLYZING] SUBUNIT B; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GMP SYNTHETASE; COMPND 5 EC: 6.3.5.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 70601; SOURCE 4 STRAIN: OT3; SOURCE 5 GENE: GUAAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS PYROCOCCUS HORIKOSHII OT3, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ASADA,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 2 (RSGI) REVDAT 3 13-JUL-11 2DPL 1 VERSN REVDAT 2 24-FEB-09 2DPL 1 VERSN REVDAT 1 12-NOV-06 2DPL 0 JRNL AUTH Y.ASADA,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURE OF THE GMP SYNTHASE FROM PYROCOCCUS JRNL TITL 2 HORIKOSHII OT3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 119556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 5934 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.43 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.50 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3530 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 726 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.014 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4477 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 952 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.32000 REMARK 3 B22 (A**2) : 3.86000 REMARK 3 B33 (A**2) : -4.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : 0.08 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.08 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.78 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DPL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB025692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : BENDING MAGNET REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS V REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 119813 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.430 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1GPM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE HEXAHYDRATE, TRIS REMARK 280 HYDROCHLORIDE, POLYETHYLENE GLYCOL 4000, GLYCEROL ANHYDROUS, REMARK 280 GLUTAMIC ACID, PH 8.5, MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.20000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.12750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.66700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.12750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.20000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.66700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 132 REMARK 465 TRP A 133 REMARK 465 ILE A 134 REMARK 465 GLU A 135 REMARK 465 SER A 136 REMARK 465 GLN A 137 REMARK 465 GLY A 138 REMARK 465 LYS A 139 REMARK 465 ILE A 140 REMARK 465 LYS A 141 REMARK 465 SER A 142 REMARK 465 HIS A 143 REMARK 465 HIS A 144 REMARK 465 ASN A 145 REMARK 465 VAL A 146 REMARK 465 GLY A 147 REMARK 465 GLY A 148 REMARK 465 LEU A 149 REMARK 465 PRO A 150 REMARK 465 GLU A 151 REMARK 465 LYS A 152 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 TRP B 3 REMARK 465 GLY B 4 REMARK 465 ARG B 5 REMARK 465 ALA B 130 REMARK 465 PRO B 131 REMARK 465 ASP B 132 REMARK 465 TRP B 133 REMARK 465 ILE B 134 REMARK 465 GLU B 135 REMARK 465 SER B 136 REMARK 465 GLN B 137 REMARK 465 GLY B 138 REMARK 465 LYS B 139 REMARK 465 ILE B 140 REMARK 465 LYS B 141 REMARK 465 SER B 142 REMARK 465 HIS B 143 REMARK 465 HIS B 144 REMARK 465 ASN B 145 REMARK 465 VAL B 146 REMARK 465 GLY B 147 REMARK 465 GLY B 148 REMARK 465 LEU B 149 REMARK 465 PRO B 150 REMARK 465 GLU B 151 REMARK 465 LYS B 152 REMARK 465 LEU B 153 REMARK 465 ASN B 154 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 243 -72.01 -105.04 REMARK 500 ASP A 262 18.69 -149.61 REMARK 500 PHE A 307 59.26 -106.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 461 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH A 463 DISTANCE = 5.45 ANGSTROMS REMARK 525 HOH A 490 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH A 504 DISTANCE = 5.18 ANGSTROMS REMARK 525 HOH A 526 DISTANCE = 5.35 ANGSTROMS REMARK 525 HOH A 559 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH A 561 DISTANCE = 5.51 ANGSTROMS REMARK 525 HOH A 597 DISTANCE = 5.47 ANGSTROMS REMARK 525 HOH A 599 DISTANCE = 5.64 ANGSTROMS REMARK 525 HOH A 608 DISTANCE = 5.28 ANGSTROMS REMARK 525 HOH A 624 DISTANCE = 5.65 ANGSTROMS REMARK 525 HOH A 645 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH A 651 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH A 664 DISTANCE = 5.78 ANGSTROMS REMARK 525 HOH A 666 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH A 691 DISTANCE = 5.40 ANGSTROMS REMARK 525 HOH A 708 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A 709 DISTANCE = 8.72 ANGSTROMS REMARK 525 HOH A 710 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH A 715 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH A 718 DISTANCE = 7.45 ANGSTROMS REMARK 525 HOH A 719 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH A 723 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A 727 DISTANCE = 8.28 ANGSTROMS REMARK 525 HOH A 728 DISTANCE = 8.69 ANGSTROMS REMARK 525 HOH A 730 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH A 767 DISTANCE = 8.82 ANGSTROMS REMARK 525 HOH A 768 DISTANCE = 8.91 ANGSTROMS REMARK 525 HOH A 769 DISTANCE = 8.54 ANGSTROMS REMARK 525 HOH A 770 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A 786 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH A 794 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A 796 DISTANCE = 7.63 ANGSTROMS REMARK 525 HOH A 797 DISTANCE = 7.59 ANGSTROMS REMARK 525 HOH A 799 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A 800 DISTANCE = 8.06 ANGSTROMS REMARK 525 HOH B 398 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH B 538 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH B 550 DISTANCE = 5.39 ANGSTROMS REMARK 525 HOH B 552 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH B 556 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH B 558 DISTANCE = 5.72 ANGSTROMS REMARK 525 HOH B 561 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH B 562 DISTANCE = 5.51 ANGSTROMS REMARK 525 HOH B 568 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH B 569 DISTANCE = 5.10 ANGSTROMS REMARK 525 HOH B 573 DISTANCE = 5.19 ANGSTROMS REMARK 525 HOH B 576 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH B 579 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH B 590 DISTANCE = 5.66 ANGSTROMS REMARK 525 HOH B 615 DISTANCE = 9.34 ANGSTROMS REMARK 525 HOH B 616 DISTANCE = 5.61 ANGSTROMS REMARK 525 HOH B 625 DISTANCE = 5.32 ANGSTROMS REMARK 525 HOH B 635 DISTANCE = 7.35 ANGSTROMS REMARK 525 HOH B 648 DISTANCE = 5.49 ANGSTROMS REMARK 525 HOH B 651 DISTANCE = 7.14 ANGSTROMS REMARK 525 HOH B 653 DISTANCE = 8.10 ANGSTROMS REMARK 525 HOH B 659 DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH B 661 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH B 663 DISTANCE = 5.66 ANGSTROMS REMARK 525 HOH B 664 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH B 667 DISTANCE = 5.10 ANGSTROMS REMARK 525 HOH B 672 DISTANCE = 7.62 ANGSTROMS REMARK 525 HOH B 698 DISTANCE = 8.51 ANGSTROMS REMARK 525 HOH B 699 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH B 700 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 702 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH B 706 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH B 707 DISTANCE = 7.90 ANGSTROMS REMARK 525 HOH B 708 DISTANCE = 10.25 ANGSTROMS REMARK 525 HOH B 709 DISTANCE = 12.42 ANGSTROMS REMARK 525 HOH B 710 DISTANCE = 14.42 ANGSTROMS REMARK 525 HOH B 714 DISTANCE = 5.75 ANGSTROMS REMARK 525 HOH B 721 DISTANCE = 5.40 ANGSTROMS REMARK 525 HOH B 727 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH B 733 DISTANCE = 5.63 ANGSTROMS REMARK 525 HOH B 741 DISTANCE = 5.10 ANGSTROMS REMARK 525 HOH B 753 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH B 758 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH B 759 DISTANCE = 7.39 ANGSTROMS REMARK 525 HOH B 760 DISTANCE = 5.18 ANGSTROMS REMARK 525 HOH B 762 DISTANCE = 7.58 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PHO001001347.1 RELATED DB: TARGETDB DBREF 2DPL A 1 308 UNP O59072 GUAAB_PYRHO 1 308 DBREF 2DPL B 1 308 UNP O59072 GUAAB_PYRHO 1 308 SEQRES 1 A 308 MET ASP TRP GLY ARG PHE VAL GLU GLU LYS VAL ARG GLU SEQRES 2 A 308 ILE ARG GLU THR VAL GLY ASP SER LYS ALA ILE ILE ALA SEQRES 3 A 308 LEU SER GLY GLY VAL ASP SER SER THR ALA ALA VAL LEU SEQRES 4 A 308 ALA HIS LYS ALA ILE GLY ASP ARG LEU HIS ALA VAL PHE SEQRES 5 A 308 VAL ASN THR GLY PHE LEU ARG LYS GLY GLU PRO GLU PHE SEQRES 6 A 308 VAL VAL LYS THR PHE ARG ASP GLU PHE GLY MET ASN LEU SEQRES 7 A 308 HIS TYR VAL ASP ALA GLN ASP ARG PHE PHE SER ALA LEU SEQRES 8 A 308 LYS GLY VAL THR ASP PRO GLU GLU LYS ARG LYS ILE ILE SEQRES 9 A 308 GLY ARG VAL PHE ILE GLU VAL PHE GLU GLU VAL ALA LYS SEQRES 10 A 308 LYS ILE GLY ALA GLU TYR LEU ILE GLN GLY THR ILE ALA SEQRES 11 A 308 PRO ASP TRP ILE GLU SER GLN GLY LYS ILE LYS SER HIS SEQRES 12 A 308 HIS ASN VAL GLY GLY LEU PRO GLU LYS LEU ASN LEU LYS SEQRES 13 A 308 LEU ILE GLU PRO LEU ARG ASP LEU TYR LYS ASP GLU VAL SEQRES 14 A 308 ARG GLU LEU ALA LYS PHE LEU GLY LEU PRO GLU LYS ILE SEQRES 15 A 308 TYR ASN ARG MET PRO PHE PRO GLY PRO GLY LEU ALA VAL SEQRES 16 A 308 ARG VAL ILE GLY GLU VAL THR PRO GLU LYS ILE ARG ILE SEQRES 17 A 308 VAL ARG GLU ALA ASN ALA ILE VAL GLU GLU GLU VAL GLU SEQRES 18 A 308 ARG ALA GLY LEU ARG PRO TRP GLN ALA PHE ALA VAL LEU SEQRES 19 A 308 LEU GLY VAL LYS THR VAL GLY VAL GLN GLY ASP ILE ARG SEQRES 20 A 308 ALA TYR LYS GLU THR ILE ALA VAL ARG ILE VAL GLU SER SEQRES 21 A 308 ILE ASP GLY MET THR ALA ASN ALA MET ASN VAL PRO TRP SEQRES 22 A 308 GLU VAL LEU GLN ARG ILE ALA PHE ARG ILE THR SER GLU SEQRES 23 A 308 ILE PRO GLU VAL GLY ARG VAL LEU TYR ASP ILE THR ASN SEQRES 24 A 308 LYS PRO PRO ALA THR ILE GLU PHE GLU SEQRES 1 B 308 MET ASP TRP GLY ARG PHE VAL GLU GLU LYS VAL ARG GLU SEQRES 2 B 308 ILE ARG GLU THR VAL GLY ASP SER LYS ALA ILE ILE ALA SEQRES 3 B 308 LEU SER GLY GLY VAL ASP SER SER THR ALA ALA VAL LEU SEQRES 4 B 308 ALA HIS LYS ALA ILE GLY ASP ARG LEU HIS ALA VAL PHE SEQRES 5 B 308 VAL ASN THR GLY PHE LEU ARG LYS GLY GLU PRO GLU PHE SEQRES 6 B 308 VAL VAL LYS THR PHE ARG ASP GLU PHE GLY MET ASN LEU SEQRES 7 B 308 HIS TYR VAL ASP ALA GLN ASP ARG PHE PHE SER ALA LEU SEQRES 8 B 308 LYS GLY VAL THR ASP PRO GLU GLU LYS ARG LYS ILE ILE SEQRES 9 B 308 GLY ARG VAL PHE ILE GLU VAL PHE GLU GLU VAL ALA LYS SEQRES 10 B 308 LYS ILE GLY ALA GLU TYR LEU ILE GLN GLY THR ILE ALA SEQRES 11 B 308 PRO ASP TRP ILE GLU SER GLN GLY LYS ILE LYS SER HIS SEQRES 12 B 308 HIS ASN VAL GLY GLY LEU PRO GLU LYS LEU ASN LEU LYS SEQRES 13 B 308 LEU ILE GLU PRO LEU ARG ASP LEU TYR LYS ASP GLU VAL SEQRES 14 B 308 ARG GLU LEU ALA LYS PHE LEU GLY LEU PRO GLU LYS ILE SEQRES 15 B 308 TYR ASN ARG MET PRO PHE PRO GLY PRO GLY LEU ALA VAL SEQRES 16 B 308 ARG VAL ILE GLY GLU VAL THR PRO GLU LYS ILE ARG ILE SEQRES 17 B 308 VAL ARG GLU ALA ASN ALA ILE VAL GLU GLU GLU VAL GLU SEQRES 18 B 308 ARG ALA GLY LEU ARG PRO TRP GLN ALA PHE ALA VAL LEU SEQRES 19 B 308 LEU GLY VAL LYS THR VAL GLY VAL GLN GLY ASP ILE ARG SEQRES 20 B 308 ALA TYR LYS GLU THR ILE ALA VAL ARG ILE VAL GLU SER SEQRES 21 B 308 ILE ASP GLY MET THR ALA ASN ALA MET ASN VAL PRO TRP SEQRES 22 B 308 GLU VAL LEU GLN ARG ILE ALA PHE ARG ILE THR SER GLU SEQRES 23 B 308 ILE PRO GLU VAL GLY ARG VAL LEU TYR ASP ILE THR ASN SEQRES 24 B 308 LYS PRO PRO ALA THR ILE GLU PHE GLU FORMUL 3 HOH *952(H2 O) HELIX 1 1 ASP A 2 GLY A 19 1 18 HELIX 2 2 GLY A 30 GLY A 45 1 16 HELIX 3 3 GLY A 61 ARG A 71 1 11 HELIX 4 4 ALA A 83 LEU A 91 1 9 HELIX 5 5 ASP A 96 GLY A 120 1 25 HELIX 6 6 TYR A 165 LEU A 176 1 12 HELIX 7 7 PRO A 179 ASN A 184 1 6 HELIX 8 8 PRO A 191 VAL A 197 5 7 HELIX 9 9 THR A 202 ALA A 223 1 22 HELIX 10 10 PRO A 272 ILE A 287 1 16 HELIX 11 11 PHE B 6 GLY B 19 1 14 HELIX 12 12 GLY B 30 GLY B 45 1 16 HELIX 13 13 GLY B 61 ARG B 71 1 11 HELIX 14 14 ALA B 83 LYS B 92 1 10 HELIX 15 15 ASP B 96 GLY B 120 1 25 HELIX 16 16 TYR B 165 GLY B 177 1 13 HELIX 17 17 PRO B 179 ASN B 184 1 6 HELIX 18 18 PRO B 191 VAL B 197 5 7 HELIX 19 19 THR B 202 ALA B 223 1 22 HELIX 20 20 PRO B 272 ILE B 287 1 16 SHEET 1 A 5 ASN A 77 ASP A 82 0 SHEET 2 A 5 LEU A 48 ASN A 54 1 N ALA A 50 O HIS A 79 SHEET 3 A 5 ALA A 23 ALA A 26 1 N ILE A 25 O VAL A 51 SHEET 4 A 5 TYR A 123 ILE A 125 1 O ILE A 125 N ILE A 24 SHEET 5 A 5 LYS A 156 ILE A 158 1 O LYS A 156 N LEU A 124 SHEET 1 B 3 GLN A 229 LEU A 234 0 SHEET 2 B 3 ARG A 247 GLU A 259 -1 O ARG A 256 N PHE A 231 SHEET 3 B 3 THR A 239 VAL A 242 -1 N GLY A 241 O ALA A 248 SHEET 1 C 6 ASN A 267 ALA A 268 0 SHEET 2 C 6 ARG A 247 GLU A 259 -1 N GLU A 259 O ASN A 267 SHEET 3 C 6 VAL A 290 ASP A 296 1 O LEU A 294 N VAL A 255 SHEET 4 C 6 VAL B 290 ASP B 296 -1 O TYR B 295 N TYR A 295 SHEET 5 C 6 GLU B 251 SER B 260 1 N VAL B 255 O LEU B 294 SHEET 6 C 6 ALA B 266 ALA B 268 -1 O ASN B 267 N GLU B 259 SHEET 1 D 6 GLN B 229 LEU B 234 0 SHEET 2 D 6 GLU B 251 SER B 260 -1 O ARG B 256 N PHE B 231 SHEET 3 D 6 VAL B 290 ASP B 296 1 O LEU B 294 N VAL B 255 SHEET 4 D 6 VAL A 290 ASP A 296 -1 N TYR A 295 O TYR B 295 SHEET 5 D 6 ARG A 247 GLU A 259 1 N VAL A 255 O LEU A 294 SHEET 6 D 6 GLN A 229 LEU A 234 -1 N PHE A 231 O ARG A 256 SHEET 1 E 5 ASN B 77 ASP B 82 0 SHEET 2 E 5 LEU B 48 ASN B 54 1 N ALA B 50 O HIS B 79 SHEET 3 E 5 ALA B 23 ALA B 26 1 N ILE B 25 O VAL B 51 SHEET 4 E 5 TYR B 123 ILE B 125 1 O ILE B 125 N ILE B 24 SHEET 5 E 5 LYS B 156 ILE B 158 1 O LYS B 156 N LEU B 124 CISPEP 1 LYS A 300 PRO A 301 0 -0.46 CISPEP 2 PRO A 301 PRO A 302 0 0.67 CISPEP 3 LYS B 300 PRO B 301 0 -0.49 CISPEP 4 PRO B 301 PRO B 302 0 0.33 CRYST1 70.400 83.334 112.255 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014205 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008908 0.00000