PDB Short entry for 2DQR HEADER DNA BINDING PROTEIN 29-MAY-06 2DQR TITLE CRYSTAL STRUCTURE OF THE REPLICATION TERMINATOR PROTEIN MUTANT TITLE 2 RTP.E39K.R42Q COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPLICATION TERMINATION PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: REPLICATION TERMINATOR PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: RTP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-3 KEYWDS DNA REPLICATION, WINGED-HELIX, RTP, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.P.VIVIAN,J.A.WILCE,M.C.J.WILCE REVDAT 5 03-APR-24 2DQR 1 REMARK REVDAT 4 10-NOV-21 2DQR 1 SEQADV REVDAT 3 11-OCT-17 2DQR 1 REMARK REVDAT 2 24-FEB-09 2DQR 1 VERSN REVDAT 1 29-MAY-07 2DQR 0 JRNL AUTH J.P.VIVIAN,J.A.WILCE,M.C.J.WILCE JRNL TITL CRYSTAL STRUCTURE OF THE REPLICATION TERMINATOR PROTEIN JRNL TITL 2 MUTANT RTP.E39K.R42Q JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 11485 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 575 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 799 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.3360 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.4230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3648 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 101 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.20000 REMARK 3 B33 (A**2) : -0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.485 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.348 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 38.830 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.870 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3700 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4931 ; 1.570 ; 2.003 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 426 ; 6.869 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 169 ;35.163 ;24.675 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 809 ;21.758 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;15.627 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 552 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2613 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1840 ; 0.245 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2527 ; 0.319 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 143 ; 0.192 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.210 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.324 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2248 ; 0.513 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3466 ; 0.899 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1658 ; 1.242 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1465 ; 2.057 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DQR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1000025732. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MARRESEARCH MAR345 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12062 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 90.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.14200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1BM9_A (RESIDUES 72 TO 88 OMITTED) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 4000, 0.2M SODIUM ACETATE, REMARK 280 0.225M TRIS HCL PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.46100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.50400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.40250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 97.50400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.46100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.40250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS TWO DIMERS. THE BIOLOGICAL REMARK 300 UNIT IS ONE DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 74 REMARK 465 VAL A 75 REMARK 465 LYS A 76 REMARK 465 LYS A 77 REMARK 465 GLU A 78 REMARK 465 GLY A 79 REMARK 465 ALA A 80 REMARK 465 LYS A 81 REMARK 465 LEU A 82 REMARK 465 GLN A 83 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 GLU B 3 REMARK 465 GLU B 4 REMARK 465 LYS B 5 REMARK 465 ARG B 6 REMARK 465 SER B 7 REMARK 465 ALA B 80 REMARK 465 LYS B 81 REMARK 465 LEU B 82 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 GLU C 3 REMARK 465 GLU C 4 REMARK 465 LYS C 5 REMARK 465 ARG C 6 REMARK 465 SER C 7 REMARK 465 SER C 8 REMARK 465 THR C 9 REMARK 465 GLY C 10 REMARK 465 LYS C 77 REMARK 465 GLU C 78 REMARK 465 GLY C 79 REMARK 465 ALA C 80 REMARK 465 LYS C 81 REMARK 465 LEU C 82 REMARK 465 MET D 1 REMARK 465 LYS D 2 REMARK 465 GLU D 3 REMARK 465 GLU D 4 REMARK 465 LYS D 5 REMARK 465 ARG D 6 REMARK 465 SER D 7 REMARK 465 LYS D 77 REMARK 465 GLU D 78 REMARK 465 GLY D 79 REMARK 465 ALA D 80 REMARK 465 LYS D 81 REMARK 465 LEU D 82 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N SER B 8 O HOH B 129 2.05 REMARK 500 O GLU C 28 N GLU C 30 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 7 -125.13 -78.71 REMARK 500 THR A 9 -95.65 -149.75 REMARK 500 PHE A 11 -62.67 -123.50 REMARK 500 LEU A 12 -71.53 -109.18 REMARK 500 VAL A 13 124.06 -177.77 REMARK 500 GLN A 29 -10.21 90.51 REMARK 500 GLU A 30 8.94 50.10 REMARK 500 LEU A 35 -109.67 -60.20 REMARK 500 GLU A 47 -39.93 148.50 REMARK 500 VAL A 85 -118.97 -85.41 REMARK 500 THR B 9 -164.96 -165.62 REMARK 500 PHE B 11 -97.38 79.91 REMARK 500 ARG B 31 28.01 -153.51 REMARK 500 LEU B 37 -67.16 21.74 REMARK 500 GLU B 47 -4.99 94.07 REMARK 500 VAL B 75 -79.21 -148.95 REMARK 500 LYS B 76 132.46 70.83 REMARK 500 GLU B 78 152.36 -38.99 REMARK 500 GLU B 84 -44.23 -135.35 REMARK 500 VAL B 85 136.82 59.23 REMARK 500 LEU C 12 -118.26 -80.69 REMARK 500 GLU C 28 -169.71 -61.39 REMARK 500 GLN C 29 -21.43 60.87 REMARK 500 LEU C 35 -78.78 -50.89 REMARK 500 LEU C 37 -44.19 -26.79 REMARK 500 GLU C 47 -46.96 143.37 REMARK 500 GLU C 84 130.91 -39.40 REMARK 500 THR D 9 -96.58 -153.62 REMARK 500 PHE D 11 -99.24 87.24 REMARK 500 LEU D 37 -41.90 -29.61 REMARK 500 LYS D 46 -60.27 -28.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1BM9 RELATED DB: PDB REMARK 900 WILD-TYPE STRUCTURE REMARK 900 RELATED ID: 1F4K RELATED DB: PDB REMARK 900 MUTANT STRUCTURE BOUND TO SYMMETRIC B-SITE DNA DBREF 2DQR A 1 122 UNP P68732 RTP_BACSU 1 122 DBREF 2DQR B 1 122 UNP P68732 RTP_BACSU 1 122 DBREF 2DQR C 1 122 UNP P68732 RTP_BACSU 1 122 DBREF 2DQR D 1 122 UNP P68732 RTP_BACSU 1 122 SEQADV 2DQR LYS A 39 UNP P68732 GLU 39 ENGINEERED MUTATION SEQADV 2DQR GLN A 42 UNP P68732 ARG 42 ENGINEERED MUTATION SEQADV 2DQR LYS B 39 UNP P68732 GLU 39 ENGINEERED MUTATION SEQADV 2DQR GLN B 42 UNP P68732 ARG 42 ENGINEERED MUTATION SEQADV 2DQR LYS C 39 UNP P68732 GLU 39 ENGINEERED MUTATION SEQADV 2DQR GLN C 42 UNP P68732 ARG 42 ENGINEERED MUTATION SEQADV 2DQR LYS D 39 UNP P68732 GLU 39 ENGINEERED MUTATION SEQADV 2DQR GLN D 42 UNP P68732 ARG 42 ENGINEERED MUTATION SEQRES 1 A 122 MET LYS GLU GLU LYS ARG SER SER THR GLY PHE LEU VAL SEQRES 2 A 122 LYS GLN ARG ALA PHE LEU LYS LEU TYR MET ILE THR MET SEQRES 3 A 122 THR GLU GLN GLU ARG LEU TYR GLY LEU LYS LEU LEU LYS SEQRES 4 A 122 VAL LEU GLN SER GLU PHE LYS GLU ILE GLY PHE LYS PRO SEQRES 5 A 122 ASN HIS THR GLU VAL TYR ARG SER LEU HIS GLU LEU LEU SEQRES 6 A 122 ASP ASP GLY ILE LEU LYS GLN ILE LYS VAL LYS LYS GLU SEQRES 7 A 122 GLY ALA LYS LEU GLN GLU VAL VAL LEU TYR GLN PHE LYS SEQRES 8 A 122 ASP TYR GLU ALA ALA LYS LEU TYR LYS LYS GLN LEU LYS SEQRES 9 A 122 VAL GLU LEU ASP ARG CYS LYS LYS LEU ILE GLU LYS ALA SEQRES 10 A 122 LEU SER ASP ASN PHE SEQRES 1 B 122 MET LYS GLU GLU LYS ARG SER SER THR GLY PHE LEU VAL SEQRES 2 B 122 LYS GLN ARG ALA PHE LEU LYS LEU TYR MET ILE THR MET SEQRES 3 B 122 THR GLU GLN GLU ARG LEU TYR GLY LEU LYS LEU LEU LYS SEQRES 4 B 122 VAL LEU GLN SER GLU PHE LYS GLU ILE GLY PHE LYS PRO SEQRES 5 B 122 ASN HIS THR GLU VAL TYR ARG SER LEU HIS GLU LEU LEU SEQRES 6 B 122 ASP ASP GLY ILE LEU LYS GLN ILE LYS VAL LYS LYS GLU SEQRES 7 B 122 GLY ALA LYS LEU GLN GLU VAL VAL LEU TYR GLN PHE LYS SEQRES 8 B 122 ASP TYR GLU ALA ALA LYS LEU TYR LYS LYS GLN LEU LYS SEQRES 9 B 122 VAL GLU LEU ASP ARG CYS LYS LYS LEU ILE GLU LYS ALA SEQRES 10 B 122 LEU SER ASP ASN PHE SEQRES 1 C 122 MET LYS GLU GLU LYS ARG SER SER THR GLY PHE LEU VAL SEQRES 2 C 122 LYS GLN ARG ALA PHE LEU LYS LEU TYR MET ILE THR MET SEQRES 3 C 122 THR GLU GLN GLU ARG LEU TYR GLY LEU LYS LEU LEU LYS SEQRES 4 C 122 VAL LEU GLN SER GLU PHE LYS GLU ILE GLY PHE LYS PRO SEQRES 5 C 122 ASN HIS THR GLU VAL TYR ARG SER LEU HIS GLU LEU LEU SEQRES 6 C 122 ASP ASP GLY ILE LEU LYS GLN ILE LYS VAL LYS LYS GLU SEQRES 7 C 122 GLY ALA LYS LEU GLN GLU VAL VAL LEU TYR GLN PHE LYS SEQRES 8 C 122 ASP TYR GLU ALA ALA LYS LEU TYR LYS LYS GLN LEU LYS SEQRES 9 C 122 VAL GLU LEU ASP ARG CYS LYS LYS LEU ILE GLU LYS ALA SEQRES 10 C 122 LEU SER ASP ASN PHE SEQRES 1 D 122 MET LYS GLU GLU LYS ARG SER SER THR GLY PHE LEU VAL SEQRES 2 D 122 LYS GLN ARG ALA PHE LEU LYS LEU TYR MET ILE THR MET SEQRES 3 D 122 THR GLU GLN GLU ARG LEU TYR GLY LEU LYS LEU LEU LYS SEQRES 4 D 122 VAL LEU GLN SER GLU PHE LYS GLU ILE GLY PHE LYS PRO SEQRES 5 D 122 ASN HIS THR GLU VAL TYR ARG SER LEU HIS GLU LEU LEU SEQRES 6 D 122 ASP ASP GLY ILE LEU LYS GLN ILE LYS VAL LYS LYS GLU SEQRES 7 D 122 GLY ALA LYS LEU GLN GLU VAL VAL LEU TYR GLN PHE LYS SEQRES 8 D 122 ASP TYR GLU ALA ALA LYS LEU TYR LYS LYS GLN LEU LYS SEQRES 9 D 122 VAL GLU LEU ASP ARG CYS LYS LYS LEU ILE GLU LYS ALA SEQRES 10 D 122 LEU SER ASP ASN PHE FORMUL 5 HOH *101(H2 O) HELIX 1 1 LYS A 14 GLU A 28 1 15 HELIX 2 2 LYS A 36 LYS A 46 1 11 HELIX 3 3 ASN A 53 ASP A 67 1 15 HELIX 4 4 ASP A 92 PHE A 122 1 31 HELIX 5 5 LYS B 14 GLN B 29 1 16 HELIX 6 6 LEU B 37 LYS B 46 1 10 HELIX 7 7 ASN B 53 ASP B 67 1 15 HELIX 8 8 ASP B 92 PHE B 122 1 31 HELIX 9 9 LYS C 14 MET C 26 1 13 HELIX 10 10 LYS C 36 LYS C 46 1 11 HELIX 11 11 ASN C 53 ASP C 67 1 15 HELIX 12 12 ASP C 92 PHE C 122 1 31 HELIX 13 13 LYS D 14 GLN D 29 1 16 HELIX 14 14 LYS D 36 GLU D 44 1 9 HELIX 15 15 ASN D 53 ASP D 67 1 15 HELIX 16 16 ASP D 92 PHE D 122 1 31 SHEET 1 A 2 LEU A 70 ILE A 73 0 SHEET 2 A 2 LEU A 87 PHE A 90 -1 O GLN A 89 N LYS A 71 SHEET 1 B 3 LEU B 32 TYR B 33 0 SHEET 2 B 3 VAL B 86 PHE B 90 -1 O TYR B 88 N LEU B 32 SHEET 3 B 3 LEU B 70 LYS B 74 -1 N LYS B 71 O GLN B 89 SHEET 1 C 2 LEU C 70 VAL C 75 0 SHEET 2 C 2 VAL C 85 PHE C 90 -1 O LEU C 87 N ILE C 73 SHEET 1 D 2 LEU D 70 VAL D 75 0 SHEET 2 D 2 VAL D 85 PHE D 90 -1 O LEU D 87 N ILE D 73 CRYST1 40.922 72.805 195.008 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024437 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013735 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005128 0.00000