PDB Short entry for 2ETC HEADER TRANSPORT PROTEIN 27-OCT-05 2ETC TITLE CRYSTAL STRUCTURE OF THE ANKYRIN REPEAT DOMAIN OF TRPV2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL SUBFAMILY V COMPND 3 MEMBER 2; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: RESIDUES 62-326; COMPND 6 SYNONYM: TRPV2, OSM-9-LIKE TRP CHANNEL 2, OTRPC2, VANILLOID RECEPTOR- COMPND 7 LIKE PROTEIN 1, VRL-1, STRETCH-ACTIVATED CHANNEL 2B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: TRPV2, SAC2B, VRL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS TRPV2, ANKYRIN REPEAT DOMAIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.JIN,R.GAUDET REVDAT 4 23-AUG-23 2ETC 1 SEQADV REVDAT 3 24-FEB-09 2ETC 1 VERSN REVDAT 2 12-SEP-06 2ETC 1 JRNL REVDAT 1 27-JUN-06 2ETC 0 JRNL AUTH X.JIN,J.TOUHEY,R.GAUDET JRNL TITL STRUCTURE OF THE N-TERMINAL ANKYRIN REPEAT DOMAIN OF THE JRNL TITL 2 TRPV2 ION CHANNEL. JRNL REF J.BIOL.CHEM. V. 281 25006 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16809337 JRNL DOI 10.1074/JBC.C600153200 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 10738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1170 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 767 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3896 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.57000 REMARK 3 B22 (A**2) : -1.10000 REMARK 3 B33 (A**2) : -1.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.507 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.357 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 45.800 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.873 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3972 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5385 ; 0.961 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 497 ; 4.757 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;40.493 ;24.780 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 690 ;16.859 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;15.056 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 614 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2988 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1800 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2740 ; 0.293 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 101 ; 0.096 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.152 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.237 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2544 ; 0.174 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3997 ; 0.323 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1577 ; 0.371 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1388 ; 0.646 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 70 A 319 4 REMARK 3 1 B 70 B 319 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1901 ; 0.38 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1901 ; 0.13 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ETC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000035067. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 8-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97922 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11944 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 48.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : 0.10000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.49300 REMARK 200 R SYM FOR SHELL (I) : 0.44700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2ETA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.33MM PROTEIN, 9% PEG8000, 0.1M REMARK 280 SODIUM CITRATE, PH 5.0, 5-7% XYLITOL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.75700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.25200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.93100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.25200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.75700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.93100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 62 REMARK 465 ASN A 63 REMARK 465 THR A 64 REMARK 465 SER A 65 REMARK 465 ALA A 66 REMARK 465 PRO A 67 REMARK 465 SER A 68 REMARK 465 GLY A 321 REMARK 465 PRO A 322 REMARK 465 TYR A 323 REMARK 465 GLN A 324 REMARK 465 PRO A 325 REMARK 465 LEU A 326 REMARK 465 ALA A 327 REMARK 465 ALA A 328 REMARK 465 ALA A 329 REMARK 465 HIS A 330 REMARK 465 HIS A 331 REMARK 465 HIS A 332 REMARK 465 HIS A 333 REMARK 465 HIS A 334 REMARK 465 HIS A 335 REMARK 465 LYS B 62 REMARK 465 ASN B 63 REMARK 465 THR B 64 REMARK 465 SER B 65 REMARK 465 ALA B 66 REMARK 465 PRO B 67 REMARK 465 SER B 68 REMARK 465 GLN B 69 REMARK 465 HIS B 202 REMARK 465 GLN B 203 REMARK 465 SER B 320 REMARK 465 GLY B 321 REMARK 465 PRO B 322 REMARK 465 TYR B 323 REMARK 465 GLN B 324 REMARK 465 PRO B 325 REMARK 465 LEU B 326 REMARK 465 ALA B 327 REMARK 465 ALA B 328 REMARK 465 ALA B 329 REMARK 465 HIS B 330 REMARK 465 HIS B 331 REMARK 465 HIS B 332 REMARK 465 HIS B 333 REMARK 465 HIS B 334 REMARK 465 HIS B 335 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE B 198 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE B 199 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 200 CG CD OE1 NE2 REMARK 470 LYS B 201 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 72 CD PRO A 72 N 0.148 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 72 CA - N - CD ANGL. DEV. = -9.4 DEGREES REMARK 500 PRO A 72 N - CA - CB ANGL. DEV. = 10.5 DEGREES REMARK 500 GLU A 211 CB - CA - C ANGL. DEV. = -23.8 DEGREES REMARK 500 LEU A 212 N - CA - CB ANGL. DEV. = 15.8 DEGREES REMARK 500 LYS B 201 N - CA - C ANGL. DEV. = -16.5 DEGREES REMARK 500 LEU B 212 N - CA - CB ANGL. DEV. = 22.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 70 71.00 41.38 REMARK 500 GLU A 71 -154.69 -156.61 REMARK 500 GLN A 203 -77.30 -116.82 REMARK 500 ASN A 259 36.47 -98.06 REMARK 500 PHE A 319 69.51 -104.76 REMARK 500 GLU B 71 -83.58 -114.30 REMARK 500 SER B 85 -75.50 -64.25 REMARK 500 PHE B 198 -74.49 -66.45 REMARK 500 GLN B 200 52.27 73.90 REMARK 500 HIS B 234 -72.28 -87.31 REMARK 500 ASN B 259 6.11 86.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN B 200 LYS B 201 146.17 REMARK 500 GLU B 211 LEU B 212 -147.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ETA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANKYRIN REPEAT DOMAIN OF TRPV2 REMARK 900 RELATED ID: 2ETB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANKYRIN REPEAT DOMAIN OF TRPV2 REMARK 900 RELATED ID: 2ET9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANKYRIN REPEAT DOMAIN OF TRPV1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SWS DATABASE REFERENCE Q9WUD2 CONFLICTS WITH THE REMARK 999 CITATION, CATERINA ET AL, 1999, NATURE, INVOLVING RESIDUE REMARK 999 151. SEQUENCE IN THIS ENTRY AGREES WITH THE CITATION. DBREF 2ETC A 62 335 UNP Q9WUD2 TRPV2_RAT 62 326 DBREF 2ETC B 62 335 UNP Q9WUD2 TRPV2_RAT 62 326 SEQADV 2ETC PRO A 67 UNP Q9WUD2 LEU 151 SEE REMARK 999 SEQADV 2ETC ALA A 327 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC ALA A 328 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC ALA A 329 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS A 330 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS A 331 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS A 332 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS A 333 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS A 334 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS A 335 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC PRO B 67 UNP Q9WUD2 LEU 151 SEE REMARK 999 SEQADV 2ETC ALA B 327 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC ALA B 328 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC ALA B 329 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS B 330 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS B 331 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS B 332 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS B 333 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS B 334 UNP Q9WUD2 CLONING ARTIFACT SEQADV 2ETC HIS B 335 UNP Q9WUD2 CLONING ARTIFACT SEQRES 1 A 274 LYS ASN THR SER ALA PRO SER GLN GLN GLU PRO ASP ARG SEQRES 2 A 274 PHE ASP ARG ASP ARG LEU PHE SER VAL VAL SER ARG GLY SEQRES 3 A 274 VAL PRO GLU GLU LEU THR GLY LEU LEU GLU TYR LEU ARG SEQRES 4 A 274 TRP ASN SER LYS TYR LEU THR ASP SER ALA TYR THR GLU SEQRES 5 A 274 GLY SER THR GLY LYS THR CYS LEU MET LYS ALA VAL LEU SEQRES 6 A 274 ASN LEU GLN ASP GLY VAL ASN ALA CYS ILE MET PRO LEU SEQRES 7 A 274 LEU GLN ILE ASP LYS ASP SER GLY ASN PRO LYS PRO LEU SEQRES 8 A 274 VAL ASN ALA GLN CYS THR ASP GLU PHE TYR GLN GLY HIS SEQRES 9 A 274 SER ALA LEU HIS ILE ALA ILE GLU LYS ARG SER LEU GLN SEQRES 10 A 274 CYS VAL LYS LEU LEU VAL GLU ASN GLY ALA ASP VAL HIS SEQRES 11 A 274 LEU ARG ALA CYS GLY ARG PHE PHE GLN LYS HIS GLN GLY SEQRES 12 A 274 THR CYS PHE TYR PHE GLY GLU LEU PRO LEU SER LEU ALA SEQRES 13 A 274 ALA CYS THR LYS GLN TRP ASP VAL VAL THR TYR LEU LEU SEQRES 14 A 274 GLU ASN PRO HIS GLN PRO ALA SER LEU GLU ALA THR ASP SEQRES 15 A 274 SER LEU GLY ASN THR VAL LEU HIS ALA LEU VAL MET ILE SEQRES 16 A 274 ALA ASP ASN SER PRO GLU ASN SER ALA LEU VAL ILE HIS SEQRES 17 A 274 MET TYR ASP GLY LEU LEU GLN MET GLY ALA ARG LEU CYS SEQRES 18 A 274 PRO THR VAL GLN LEU GLU GLU ILE SER ASN HIS GLN GLY SEQRES 19 A 274 LEU THR PRO LEU LYS LEU ALA ALA LYS GLU GLY LYS ILE SEQRES 20 A 274 GLU ILE PHE ARG HIS ILE LEU GLN ARG GLU PHE SER GLY SEQRES 21 A 274 PRO TYR GLN PRO LEU ALA ALA ALA HIS HIS HIS HIS HIS SEQRES 22 A 274 HIS SEQRES 1 B 274 LYS ASN THR SER ALA PRO SER GLN GLN GLU PRO ASP ARG SEQRES 2 B 274 PHE ASP ARG ASP ARG LEU PHE SER VAL VAL SER ARG GLY SEQRES 3 B 274 VAL PRO GLU GLU LEU THR GLY LEU LEU GLU TYR LEU ARG SEQRES 4 B 274 TRP ASN SER LYS TYR LEU THR ASP SER ALA TYR THR GLU SEQRES 5 B 274 GLY SER THR GLY LYS THR CYS LEU MET LYS ALA VAL LEU SEQRES 6 B 274 ASN LEU GLN ASP GLY VAL ASN ALA CYS ILE MET PRO LEU SEQRES 7 B 274 LEU GLN ILE ASP LYS ASP SER GLY ASN PRO LYS PRO LEU SEQRES 8 B 274 VAL ASN ALA GLN CYS THR ASP GLU PHE TYR GLN GLY HIS SEQRES 9 B 274 SER ALA LEU HIS ILE ALA ILE GLU LYS ARG SER LEU GLN SEQRES 10 B 274 CYS VAL LYS LEU LEU VAL GLU ASN GLY ALA ASP VAL HIS SEQRES 11 B 274 LEU ARG ALA CYS GLY ARG PHE PHE GLN LYS HIS GLN GLY SEQRES 12 B 274 THR CYS PHE TYR PHE GLY GLU LEU PRO LEU SER LEU ALA SEQRES 13 B 274 ALA CYS THR LYS GLN TRP ASP VAL VAL THR TYR LEU LEU SEQRES 14 B 274 GLU ASN PRO HIS GLN PRO ALA SER LEU GLU ALA THR ASP SEQRES 15 B 274 SER LEU GLY ASN THR VAL LEU HIS ALA LEU VAL MET ILE SEQRES 16 B 274 ALA ASP ASN SER PRO GLU ASN SER ALA LEU VAL ILE HIS SEQRES 17 B 274 MET TYR ASP GLY LEU LEU GLN MET GLY ALA ARG LEU CYS SEQRES 18 B 274 PRO THR VAL GLN LEU GLU GLU ILE SER ASN HIS GLN GLY SEQRES 19 B 274 LEU THR PRO LEU LYS LEU ALA ALA LYS GLU GLY LYS ILE SEQRES 20 B 274 GLU ILE PHE ARG HIS ILE LEU GLN ARG GLU PHE SER GLY SEQRES 21 B 274 PRO TYR GLN PRO LEU ALA ALA ALA HIS HIS HIS HIS HIS SEQRES 22 B 274 HIS HELIX 1 1 ASP A 76 GLY A 87 1 12 HELIX 2 2 VAL A 88 THR A 93 5 6 HELIX 3 3 GLY A 94 ASN A 102 1 9 HELIX 4 4 ASP A 108 THR A 112 5 5 HELIX 5 5 THR A 119 ASN A 127 1 9 HELIX 6 6 CYS A 135 SER A 146 1 12 HELIX 7 7 PRO A 151 ASN A 154 5 4 HELIX 8 8 ALA A 167 LYS A 174 1 8 HELIX 9 9 SER A 176 GLU A 185 1 10 HELIX 10 10 LEU A 212 THR A 220 1 9 HELIX 11 11 GLN A 222 ASN A 232 1 11 HELIX 12 12 THR A 248 ALA A 257 1 10 HELIX 13 13 SER A 260 CYS A 282 1 23 HELIX 14 14 GLN A 286 ILE A 290 5 5 HELIX 15 15 THR A 297 GLU A 305 1 9 HELIX 16 16 LYS A 307 PHE A 319 1 13 HELIX 17 17 ASP B 76 ARG B 86 1 11 HELIX 18 18 VAL B 88 THR B 93 5 6 HELIX 19 19 GLY B 94 ASN B 102 1 9 HELIX 20 20 ASP B 108 THR B 112 5 5 HELIX 21 21 THR B 119 ASN B 127 1 9 HELIX 22 22 CYS B 135 SER B 146 1 12 HELIX 23 23 PRO B 151 ASN B 154 5 4 HELIX 24 24 ALA B 167 LYS B 174 1 8 HELIX 25 25 SER B 176 GLU B 185 1 10 HELIX 26 26 LEU B 212 THR B 220 1 9 HELIX 27 27 GLN B 222 ASN B 232 1 11 HELIX 28 28 THR B 248 ALA B 257 1 10 HELIX 29 29 SER B 260 CYS B 282 1 23 HELIX 30 30 GLN B 286 ILE B 290 5 5 HELIX 31 31 THR B 297 GLU B 305 1 9 HELIX 32 32 LYS B 307 ARG B 317 1 11 SHEET 1 A 2 GLN A 156 CYS A 157 0 SHEET 2 A 2 HIS A 165 SER A 166 -1 O HIS A 165 N CYS A 157 SHEET 1 B 2 GLN B 156 THR B 158 0 SHEET 2 B 2 GLN B 163 SER B 166 -1 O HIS B 165 N CYS B 157 SSBOND 1 CYS A 195 CYS A 206 1555 1555 2.05 SSBOND 2 CYS B 195 CYS B 206 1555 1555 2.04 CISPEP 1 GLU A 71 PRO A 72 0 -18.66 CISPEP 2 GLN B 70 GLU B 71 0 1.91 CISPEP 3 GLU B 71 PRO B 72 0 -1.91 CRYST1 39.514 95.862 164.504 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025307 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010432 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006079 0.00000