PDB Short entry for 2EVW HEADER SIGNALING PROTEIN 01-NOV-05 2EVW TITLE CRYSTAL STRUCTURE ANALYSIS OF A FLUORESCENT FORM OF H-RAS P21 IN TITLE 2 COMPLEX WITH R-CAGED GTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: X; COMPND 4 FRAGMENT: TRUNCATED FORM RESIDUES 1-166; COMPND 5 SYNONYM: TRANSFORMING PROTEIN P21, H-RAS-1, C-H-RAS; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: CK600K; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTAC RAS KEYWDS GUANINE NUCLEOTIDE BINDING PROTEIN, FLUORESCENCE, CAGED GTP, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION NUMMDL 2 AUTHOR B.U.KLINK REVDAT 7 23-AUG-23 2EVW 1 REMARK REVDAT 6 20-OCT-21 2EVW 1 REMARK SEQADV LINK REVDAT 5 18-OCT-17 2EVW 1 REMARK REVDAT 4 13-JUL-11 2EVW 1 VERSN REVDAT 3 24-FEB-09 2EVW 1 VERSN REVDAT 2 05-SEP-06 2EVW 1 JRNL LINK REMARK MASTER REVDAT 1 30-MAY-06 2EVW 0 JRNL AUTH B.U.KLINK,R.S.GOODY,A.J.SCHEIDIG JRNL TITL A NEWLY DESIGNED MICROSPECTROFLUOROMETER FOR KINETIC STUDIES JRNL TITL 2 ON PROTEIN CRYSTALS IN COMBINATION WITH X-RAY DIFFRACTION. JRNL REF BIOPHYS.J. V. 91 981 2006 JRNL REFN ISSN 0006-3495 JRNL PMID 16698776 JRNL DOI 10.1529/BIOPHYSJ.105.078931 REMARK 2 REMARK 2 RESOLUTION. 1.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 78796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3909 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5519 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE SET COUNT : 290 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1317 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 239 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 14.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 6.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.68000 REMARK 3 B22 (A**2) : -0.68000 REMARK 3 B33 (A**2) : 1.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.036 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.039 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.037 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.682 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.978 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.971 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2808 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2472 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3812 ; 1.855 ; 2.017 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5740 ; 0.860 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 330 ; 6.228 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;37.730 ;24.493 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 480 ;14.091 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;19.607 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 416 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3102 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 562 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 178 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1314 ; 0.193 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 650 ; 0.191 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 899 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 238 ; 0.255 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.020 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.195 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 29 ; 0.285 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 34 ; 0.270 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): 1 ; 0.110 ; 0.200 REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2152 ; 1.183 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 684 ; 0.235 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2658 ; 1.287 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1399 ; 2.209 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1154 ; 2.845 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 1 X 166 REMARK 3 ORIGIN FOR THE GROUP (A): 18.9480 55.3590 -2.2740 REMARK 3 T TENSOR REMARK 3 T11: 0.0123 T22: 0.0190 REMARK 3 T33: -0.0511 T12: 0.0008 REMARK 3 T13: -0.0147 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.2835 L22: 1.2006 REMARK 3 L33: 0.5034 L12: -0.1116 REMARK 3 L13: -0.2401 L23: -0.0042 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: 0.0622 S13: -0.0077 REMARK 3 S21: -0.0029 S22: 0.0094 S23: -0.1168 REMARK 3 S31: -0.0252 S32: -0.0384 S33: -0.0174 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 367 X 368 REMARK 3 ORIGIN FOR THE GROUP (A): 21.2240 68.1610 -2.1350 REMARK 3 T TENSOR REMARK 3 T11: 0.0420 T22: -0.0211 REMARK 3 T33: 0.0154 T12: -0.0028 REMARK 3 T13: 0.0040 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 2.7526 L22: 1.1321 REMARK 3 L33: 7.0211 L12: 0.8853 REMARK 3 L13: 0.0585 L23: 2.4579 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: 0.2373 S13: 0.4164 REMARK 3 S21: -0.1633 S22: 0.0317 S23: -0.2185 REMARK 3 S31: -0.3234 S32: 0.0878 S33: -0.0300 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 369 X 607 REMARK 3 ORIGIN FOR THE GROUP (A): 18.4470 54.5900 0.8860 REMARK 3 T TENSOR REMARK 3 T11: 0.0114 T22: 0.0136 REMARK 3 T33: -0.0909 T12: 0.0006 REMARK 3 T13: -0.0327 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 1.9987 L22: 2.1819 REMARK 3 L33: 0.7508 L12: 0.1178 REMARK 3 L13: -0.1917 L23: 0.5288 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: -0.0094 S13: -0.0628 REMARK 3 S21: 0.1627 S22: 0.0834 S23: -0.1932 REMARK 3 S31: 0.0015 S32: -0.0206 S33: -0.0836 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 AN IANBD FLUOROPHORE WAS ATTACHED TO CYS-32. THE STRUCTURE WAS REMARK 3 REFINED USING TWO ALTERNATIVE CONFORMATIONS FOR THE WHOLE PROTEIN REMARK 3 CHAIN. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. THE REMARK 3 CLOSE CONTACTS WITH WATER MOLECULES ARE CAUSED BY THE TREATMENT OF REMARK 3 THE REMARK 3 WHOLE PROTEIN CHAIN WITH TWO ALTERNATIVE CONFORMATIONS, BUT ONLY REMARK 3 ONE REMARK 3 POSITION PER WATER MOLECULE. REMARK 4 REMARK 4 2EVW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035156. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.939 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PRODC REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78838 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 REMARK 200 RESOLUTION RANGE LOW (A) : 69.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : 0.05200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.67900 REMARK 200 R SYM FOR SHELL (I) : 0.67900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.430 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 5P21 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 64 MM TRIS PH 7.6, REMARK 280 20 MM MAGNESIUM CHLORIDE, 10 MM DTT, 0,1 MM SODIUM AZIDE; REMARK 280 RESERVOIR SOLUTION: 100 MM HEPES PH 7.2, 200 MM MAGNESIUM REMARK 280 ACETATE, 16% PEG 8000 (FRESHLY PREPARED) MIXTURE OF EQUAL REMARK 280 VOLUMES OF PROTEIN AND RESERVOIR SOLUTION, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 17.75500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 8.87750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.63250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG X 123 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 1 ARG X 123 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 1 ARG X 128 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 1 ARG X 135 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 1 ARG X 135 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 1 ARG X 161 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP X 30 73.77 -111.46 REMARK 500 1 ILE X 36 -66.86 -96.34 REMARK 500 1 GLN X 61 -81.13 -37.94 REMARK 500 1 GLU X 62 -21.55 66.17 REMARK 500 1 GLU X 63 155.51 151.27 REMARK 500 1 LYS X 117 36.69 76.89 REMARK 500 1 ARG X 149 -2.43 75.82 REMARK 500 2 ILE X 36 -73.84 -100.99 REMARK 500 2 GLN X 61 -130.13 -58.38 REMARK 500 2 GLU X 62 14.61 135.81 REMARK 500 2 GLU X 63 170.32 123.79 REMARK 500 2 LYS X 117 34.58 80.15 REMARK 500 2 ARG X 149 -2.98 85.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG X 368 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER X 17 OG REMARK 620 2 THR X 35 OG1 98.3 REMARK 620 3 CAG X 367 O2B 96.5 163.7 REMARK 620 4 CAG X 367 O1G 174.4 85.9 79.8 REMARK 620 5 HOH X 371 O 91.2 94.0 92.5 84.9 REMARK 620 6 HOH X 475 O 97.2 84.4 87.1 86.8 171.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG X 368 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAG X 367 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE XY2 X 332 DBREF 2EVW X 1 166 UNP P01112 RASH_HUMAN 1 166 SEQADV 2EVW CYS X 32 UNP P01112 TYR 32 ENGINEERED MUTATION SEQADV 2EVW SER X 118 UNP P01112 CYS 118 ENGINEERED MUTATION SEQRES 1 X 166 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 X 166 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 X 166 HIS PHE VAL ASP GLU CYS ASP PRO THR ILE GLU ASP SER SEQRES 4 X 166 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 X 166 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 X 166 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 X 166 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 X 166 ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 X 166 ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 X 166 SER ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN ALA SEQRES 11 X 166 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE GLU SEQRES 12 X 166 THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA PHE SEQRES 13 X 166 TYR THR LEU VAL ARG GLU ILE ARG GLN HIS HET MG X 368 1 HET CAG X 367 43 HET XY2 X 332 21 HETNAM MG MAGNESIUM ION HETNAM CAG GUANOSINE 5'-TRIPHOSPHATE P3-[1-(2-NITROPHENYL)ETHYL HETNAM 2 CAG ESTER] HETNAM XY2 N,N'-DIMETHYL-N-(ACETYL)-N'-(7-NITROBENZ-2-OXA-1,3- HETNAM 2 XY2 DIAZOL-4-YL)ETHYLENEDIAMINE FORMUL 2 MG MG 2+ FORMUL 3 CAG C18 H23 N6 O16 P3 FORMUL 4 XY2 C12 H15 N5 O4 FORMUL 5 HOH *239(H2 O) HELIX 1 1 GLY X 15 ASN X 26 1 12 HELIX 2 2 SER X 65 ARG X 73 1 9 HELIX 3 3 ASN X 86 ASP X 92 1 7 HELIX 4 4 ASP X 92 ASP X 105 1 14 HELIX 5 5 GLU X 126 GLY X 138 1 13 HELIX 6 6 GLY X 151 HIS X 166 1 16 SHEET 1 A 6 ASP X 38 ILE X 46 0 SHEET 2 A 6 GLU X 49 ASP X 57 -1 O ILE X 55 N TYR X 40 SHEET 3 A 6 GLU X 3 VAL X 9 1 N VAL X 8 O LEU X 56 SHEET 4 A 6 GLY X 77 ALA X 83 1 O LEU X 79 N VAL X 7 SHEET 5 A 6 MET X 111 ASN X 116 1 O ASN X 116 N PHE X 82 SHEET 6 A 6 TYR X 141 GLU X 143 1 O ILE X 142 N LEU X 113 LINK SG ACYS X 32 C19AXY2 X 332 1555 1555 1.77 LINK OG ASER X 17 MG A MG X 368 1555 1555 2.06 LINK OG1ATHR X 35 MG A MG X 368 1555 1555 2.09 LINK O2BACAG X 367 MG A MG X 368 1555 1555 1.93 LINK O1GACAG X 367 MG A MG X 368 1555 1555 2.34 LINK MG A MG X 368 O AHOH X 371 1555 1555 1.99 LINK MG A MG X 368 O AHOH X 475 1555 1555 2.15 SITE 1 AC1 6 SER X 17 THR X 35 ASP X 57 CAG X 367 SITE 2 AC1 6 HOH X 371 HOH X 475 SITE 1 AC2 27 GLY X 12 GLY X 13 VAL X 14 GLY X 15 SITE 2 AC2 27 LYS X 16 SER X 17 ALA X 18 PHE X 28 SITE 3 AC2 27 VAL X 29 ASP X 30 GLU X 31 THR X 35 SITE 4 AC2 27 GLU X 98 ARG X 102 ASN X 116 LYS X 117 SITE 5 AC2 27 ASP X 119 LEU X 120 SER X 145 ALA X 146 SITE 6 AC2 27 LYS X 147 MG X 368 HOH X 371 HOH X 384 SITE 7 AC2 27 HOH X 445 HOH X 447 HOH X 475 SITE 1 AC3 6 CYS X 32 TYR X 64 ARG X 102 ASP X 105 SITE 2 AC3 6 ARG X 128 GLN X 131 CRYST1 69.300 69.300 35.510 90.00 90.00 90.00 P 41 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014430 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014430 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028161 0.00000