PDB Short entry for 2FD6 HEADER IMMUNE SYSTEM, HYDROLASE 13-DEC-05 2FD6 TITLE STRUCTURE OF HUMAN UROKINASE PLASMINOGEN ACTIVATOR IN COMPLEX WITH TITLE 2 UROKINASE RECEPTOR AND AN ANTI-UPAR ANTIBODY AT 1.9 A CAVEAT 2FD6 NAG B 1 HAS WRONG CHIRALITY AT ATOM C1 FUC B 2 HAS WRONG CAVEAT 2 2FD6 CHIRALITY AT ATOM C1 NAG C 2 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UROKINASE-TYPE PLASMINOGEN ACTIVATOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: AMINO TERMINAL RESIDUES 31-152; COMPND 5 EC: 3.4.21.73; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: L CHAIN OF FAB OF ATN-615 ANTI-UPAR ANTIBODY; COMPND 9 CHAIN: L; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: H CHAIN OF FAB OF ATN-615 ANTI-UPAR ANTIBODY; COMPND 12 CHAIN: H; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: UROKINASE PLASMINOGEN ACTIVATOR SURFACE RECEPTOR; COMPND 15 CHAIN: U; COMPND 16 FRAGMENT: RESIDUES 23-297; COMPND 17 SYNONYM: UPAR, U-PAR, MONOCYTE ACTIVATION ANTIGEN MO3, CD87 ANTIGEN; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: DROSOPHILA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FRUIT FLIES; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7215; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: S2 CELLS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PMT-BIP-V5-HIS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 SECRETION: ASCITE LIQUID; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 17 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 18 ORGANISM_TAXID: 10090; SOURCE 19 SECRETION: ASCITE LIQUID; SOURCE 20 MOL_ID: 4; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_COMMON: HUMAN; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM: DROSOPHILA; SOURCE 25 EXPRESSION_SYSTEM_COMMON: FRUIT FLIES; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 7215; SOURCE 27 EXPRESSION_SYSTEM_CELL_LINE: S2 CELLS; SOURCE 28 EXPRESSION_SYSTEM_VECTOR: PMT-BIP-V5-HIS KEYWDS UPAR, ATF, ATN-615 ANTIBODY, FAB, TERNARY COMPLEX, IMMUNE SYSTEM, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.HUANG,Q.HUAI,Y.LI REVDAT 6 30-AUG-23 2FD6 1 HETSYN REVDAT 5 29-JUL-20 2FD6 1 CAVEAT COMPND REMARK SEQADV REVDAT 5 2 1 HETNAM LINK SITE ATOM REVDAT 4 18-JUL-12 2FD6 1 LINK REVDAT 3 13-JUL-11 2FD6 1 VERSN REVDAT 2 24-FEB-09 2FD6 1 VERSN REVDAT 1 21-FEB-06 2FD6 0 JRNL AUTH Q.HUAI,A.P.MAZAR,A.KUO,G.C.PARRY,D.E.SHAW,J.CALLAHAN,Y.LI, JRNL AUTH 2 C.YUAN,C.BIAN,L.CHEN,B.FURIE,B.C.FURIE,D.B.CINES,M.HUANG JRNL TITL STRUCTURE OF HUMAN UROKINASE PLASMINOGEN ACTIVATOR IN JRNL TITL 2 COMPLEX WITH ITS RECEPTOR JRNL REF SCIENCE V. 311 656 2006 JRNL REFN ISSN 0036-8075 JRNL PMID 16456079 JRNL DOI 10.1126/SCIENCE.1121143 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1755432.420 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 83101 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4228 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10624 REMARK 3 BIN R VALUE (WORKING SET) : 0.4030 REMARK 3 BIN FREE R VALUE : 0.4100 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 559 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6139 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 125 REMARK 3 SOLVENT ATOMS : 336 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.31000 REMARK 3 B22 (A**2) : 4.95000 REMARK 3 B33 (A**2) : -4.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.70000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.36 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.34 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.900 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.43 REMARK 3 BSOL : 300.0 REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : TEMP.DUMMY REMARK 3 PARAMETER FILE 3 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : ION.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FD6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035735. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-05; NULL; NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 90; NULL; NULL; NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y; Y; Y REMARK 200 RADIATION SOURCE : APS; NSLS; NSLS; APS REMARK 200 BEAMLINE : 22-ID; X25; X12C; 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL; NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL; NULL; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.00; 1.00; 1.0; NULL REMARK 200 MONOCHROMATOR : NULL; NULL; NULL; NULL REMARK 200 OPTICS : NULL; NULL; NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD; CCD; NULL REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; NULL; NULL; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86852 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 41.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.33800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL; NULL; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2FAT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4% PEG4000, 5% ETHYLENE GLYCOL, 5% REMARK 280 METHANOL, 0.05% SODIUM AZIDE, 50 MM CACODYLATE, PH 6.5, REMARK 280 MICRODIALYSIS, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.40250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, H, U, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, U, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 51.79200 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -43.40250 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY H 127 REMARK 465 GLU U 34 REMARK 465 GLY U 35 REMARK 465 GLU U 36 REMARK 465 SER U 81 REMARK 465 GLY U 82 REMARK 465 ARG U 83 REMARK 465 ALA U 84 REMARK 465 VAL U 85 REMARK 465 THR U 86 REMARK 465 TYR U 87 REMARK 465 SER U 88 REMARK 465 ARG U 89 REMARK 465 SER U 90 REMARK 465 ARG U 91 REMARK 465 ILE U 130 REMARK 465 GLN U 131 REMARK 465 GLU U 132 REMARK 465 GLY U 133 REMARK 465 GLU U 134 REMARK 465 GLU U 135 REMARK 465 GLY U 136 REMARK 465 ARG U 137 REMARK 465 PRO U 138 REMARK 465 LYS U 139 REMARK 465 HIS U 249 REMARK 465 ALA U 250 REMARK 465 HIS U 251 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O6 NAG B 1 O1 FUC B 2 0.65 REMARK 500 ND2 ASN U 172 O1 NAG C 1 0.79 REMARK 500 C6 NAG B 1 O1 FUC B 2 0.82 REMARK 500 CG ASN U 172 O1 NAG C 1 1.26 REMARK 500 O6 NAG B 1 O5 FUC B 2 1.73 REMARK 500 OD1 ASN U 172 O1 NAG C 1 1.78 REMARK 500 NE2 HIS U 143 O HOH U 545 1.87 REMARK 500 O ASN H 128 OG SER H 180 1.95 REMARK 500 NE2 HIS U 128 O HOH U 545 1.96 REMARK 500 NE2 HIS A 41 O HOH A 523 1.97 REMARK 500 ND2 ASN U 52 O1 NAG B 1 2.00 REMARK 500 O4 NAG C 1 O5 NAG C 2 2.00 REMARK 500 ND2 ASN U 172 O7 NAG C 1 2.01 REMARK 500 C5 NAG B 1 O1 FUC B 2 2.03 REMARK 500 NE2 HIS A 29 O HOH A 523 2.06 REMARK 500 C6 NAG B 1 C1 FUC B 2 2.15 REMARK 500 OE1 GLU U 183 O HOH U 545 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY H 134 C CYS H 135 N -0.197 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO L 94 C - N - CA ANGL. DEV. = -14.0 DEGREES REMARK 500 GLY H 134 C - N - CA ANGL. DEV. = -15.2 DEGREES REMARK 500 GLY H 134 CA - C - N ANGL. DEV. = -17.2 DEGREES REMARK 500 GLY H 134 O - C - N ANGL. DEV. = 10.4 DEGREES REMARK 500 CYS H 135 CA - CB - SG ANGL. DEV. = 7.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 15 -126.71 61.77 REMARK 500 PHE A 25 60.58 -117.39 REMARK 500 SER A 26 13.72 54.31 REMARK 500 GLU A 52 -136.01 -64.77 REMARK 500 ALA A 62 50.69 167.26 REMARK 500 MET A 67 54.73 -112.16 REMARK 500 TRP A 74 -5.84 -55.11 REMARK 500 ASN A 107 90.79 -67.85 REMARK 500 ARG A 109 7.83 -46.69 REMARK 500 TRP A 112 -158.14 -136.17 REMARK 500 CYS A 113 162.49 179.27 REMARK 500 VAL A 128 127.72 -39.02 REMARK 500 CYS A 131 22.67 -73.97 REMARK 500 ILE L 51 -46.87 64.82 REMARK 500 ALA L 84 -171.97 179.56 REMARK 500 TYR L 93 -57.80 -4.40 REMARK 500 PRO L 140 -178.62 -68.79 REMARK 500 ALA L 213 122.98 174.58 REMARK 500 LYS L 214 -172.60 52.94 REMARK 500 HIS H 52A -56.20 69.58 REMARK 500 THR H 83 -169.20 -119.02 REMARK 500 ALA H 88 -177.81 -172.78 REMARK 500 LEU H 133 139.31 -178.55 REMARK 500 CYS H 135 127.46 175.61 REMARK 500 SER U 44 178.36 172.65 REMARK 500 LEU U 75 18.70 50.84 REMARK 500 PRO U 118 -4.02 -59.54 REMARK 500 CYS U 153 -70.08 -65.01 REMARK 500 PRO U 154 94.18 -38.07 REMARK 500 ASN U 162 -15.47 -44.38 REMARK 500 ASP U 163 21.16 -157.21 REMARK 500 THR U 174 124.58 -37.28 REMARK 500 CYS U 197 171.47 178.12 REMARK 500 HIS U 229 -155.58 -128.41 REMARK 500 GLU U 230 -162.38 48.71 REMARK 500 LYS U 232 -158.29 -79.30 REMARK 500 ASN U 233 41.51 -85.49 REMARK 500 CYS U 247 38.97 -97.83 REMARK 500 ASN U 259 -97.95 -111.72 REMARK 500 THR U 267 57.10 -116.36 REMARK 500 PRO U 274 66.38 -62.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FAT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ATN-615 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AMINOACID SEQUENCE DATABASE REFERENCE IS CURRENTLY NOT REMARK 999 AVAILABLE FOR FAB ATN-615 ANTI-UPAR ANTIBODY, LIGHT AND REMARK 999 HEAVY CHAINS DBREF 2FD6 A 11 132 UNP P00749 UROK_HUMAN 31 152 DBREF 2FD6 L 26 212 UNP Q52L64 Q52L64_MOUSE 46 239 DBREF 2FD6 H 2 192 UNP Q4V9V8 Q4V9V8_MOUSE 21 223 DBREF 2FD6 U 2 275 UNP Q03405 UPAR_HUMAN 23 297 SEQADV 2FD6 SER U 1A UNP Q03405 CLONING ARTIFACT SEQRES 1 A 122 CYS ASP CYS LEU ASN GLY GLY THR CYS VAL SER ASN LYS SEQRES 2 A 122 TYR PHE SER ASN ILE HIS TRP CYS ASN CYS PRO LYS LYS SEQRES 3 A 122 PHE GLY GLY GLN HIS CYS GLU ILE ASP LYS SER LYS THR SEQRES 4 A 122 CYS TYR GLU GLY ASN GLY HIS PHE TYR ARG GLY LYS ALA SEQRES 5 A 122 SER THR ASP THR MET GLY ARG PRO CYS LEU PRO TRP ASN SEQRES 6 A 122 SER ALA THR VAL LEU GLN GLN THR TYR HIS ALA HIS ARG SEQRES 7 A 122 SER ASP ALA LEU GLN LEU GLY LEU GLY LYS HIS ASN TYR SEQRES 8 A 122 CYS ARG ASN PRO ASP ASN ARG ARG ARG PRO TRP CYS TYR SEQRES 9 A 122 VAL GLN VAL GLY LEU LYS PRO LEU VAL GLN GLU CYS MET SEQRES 10 A 122 VAL HIS ASP CYS ALA SEQRES 1 L 214 ASP ILE VAL LEU THR GLN SER PRO ASP ILE THR ALA ALA SEQRES 2 L 214 SER LEU GLY GLN LYS VAL THR ILE THR CYS SER ALA SER SEQRES 3 L 214 SER SER VAL SER TYR MET HIS TRP TYR GLN GLN LYS SER SEQRES 4 L 214 GLY THR SER PRO LYS PRO TRP ILE PHE GLU ILE SER LYS SEQRES 5 L 214 LEU ALA SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SEQRES 6 L 214 SER GLY THR SER TYR SER LEU THR ILE SER SER MET GLU SEQRES 7 L 214 ALA GLU ASP ALA ALA ILE TYR TYR CYS GLN GLN TRP ASN SEQRES 8 L 214 TYR PRO PHE THR PHE GLY GLY GLY THR LYS LEU GLU ILE SEQRES 9 L 214 LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE PHE PRO SEQRES 10 L 214 PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SER VAL SEQRES 11 L 214 VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP ILE ASN SEQRES 12 L 214 VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN ASN GLY SEQRES 13 L 214 VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS ASP SER SEQRES 14 L 214 THR TYR SER MET SER SER THR LEU THR LEU THR LYS ASP SEQRES 15 L 214 GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU ALA THR SEQRES 16 L 214 HIS LYS THR SER THR SER PRO ILE VAL LYS SER PHE ASN SEQRES 17 L 214 ARG ASN GLU ALA LYS ALA SEQRES 1 H 213 GLY VAL LYS LEU GLN GLN SER GLY PRO GLU VAL VAL LYS SEQRES 2 H 213 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 213 TYR SER PHE THR ASN PHE TYR ILE HIS TRP VAL LYS GLN SEQRES 4 H 213 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY TRP ILE PHE SEQRES 5 H 213 HIS GLY SER ASP ASN THR GLU TYR ASN GLU LYS PHE LYS SEQRES 6 H 213 ASP LYS ALA THR LEU THR ALA ASP THR SER SER SER THR SEQRES 7 H 213 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 H 213 ALA VAL TYR PHE CYS ALA ARG TRP GLY PRO HIS TRP TYR SEQRES 9 H 213 PHE ASP VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SEQRES 10 H 213 SER ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU ALA SEQRES 11 H 213 PRO GLY ASN SER MET VAL THR LEU GLY CYS LEU VAL LYS SEQRES 12 H 213 GLY TYR PHE PRO GLU PRO VAL THR VAL THR TRP ASN SER SEQRES 13 H 213 GLY SER LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 14 H 213 LEU GLN SER ASP LEU TYR THR LEU SER SER SER VAL THR SEQRES 15 H 213 VAL PRO SER SER THR TRP PRO SER GLU THR VAL THR CYS SEQRES 16 H 213 ASN VAL ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS SEQRES 17 H 213 LYS ILE ALA ALA ALA SEQRES 1 U 276 SER LEU ARG CYS MET GLN CYS LYS THR ASN GLY ASP CYS SEQRES 2 U 276 ARG VAL GLU GLU CYS ALA LEU GLY GLN ASP LEU CYS ARG SEQRES 3 U 276 THR THR ILE VAL ARG LEU TRP GLU GLU GLY GLU GLU LEU SEQRES 4 U 276 GLU LEU VAL GLU LYS SER CYS THR HIS SER GLU LYS THR SEQRES 5 U 276 ASN ARG THR LEU SER TYR ARG THR GLY LEU LYS ILE THR SEQRES 6 U 276 SER LEU THR GLU VAL VAL CYS GLY LEU ASP LEU CYS ASN SEQRES 7 U 276 GLN GLY ASN SER GLY ARG ALA VAL THR TYR SER ARG SER SEQRES 8 U 276 ARG TYR LEU GLU CYS ILE SER CYS GLY SER SER ASP MET SEQRES 9 U 276 SER CYS GLU ARG GLY ARG HIS GLN SER LEU GLN CYS ARG SEQRES 10 U 276 SER PRO GLU GLU GLN CYS LEU ASP VAL VAL THR HIS TRP SEQRES 11 U 276 ILE GLN GLU GLY GLU GLU GLY ARG PRO LYS ASP ASP ARG SEQRES 12 U 276 HIS LEU ARG GLY CYS GLY TYR LEU PRO GLY CYS PRO GLY SEQRES 13 U 276 SER ASN GLY PHE HIS ASN ASN ASP THR PHE HIS PHE LEU SEQRES 14 U 276 LYS CYS CYS ASN THR THR LYS CYS ASN GLU GLY PRO ILE SEQRES 15 U 276 LEU GLU LEU GLU ASN LEU PRO GLN ASN GLY ARG GLN CYS SEQRES 16 U 276 TYR SER CYS LYS GLY ASN SER THR HIS GLY CYS SER SER SEQRES 17 U 276 GLU GLU THR PHE LEU ILE ASP CYS ARG GLY PRO MET ASN SEQRES 18 U 276 GLN CYS LEU VAL ALA THR GLY THR HIS GLU PRO LYS ASN SEQRES 19 U 276 GLN SER TYR MET VAL ARG GLY CYS ALA THR ALA SER MET SEQRES 20 U 276 CYS GLN HIS ALA HIS LEU GLY ASP ALA PHE SER MET ASN SEQRES 21 U 276 HIS ILE ASP VAL SER CYS CYS THR LYS SER GLY CYS ASN SEQRES 22 U 276 HIS PRO ASP MODRES 2FD6 ASN U 52 ASN GLYCOSYLATION SITE MODRES 2FD6 ASN U 172 ASN GLYCOSYLATION SITE HET NAG B 1 15 HET FUC B 2 11 HET NAG C 1 15 HET NAG C 2 15 HET SO4 A 501 5 HET ETX L 401 6 HET EDO L 405 4 HET ETX L 407 6 HET ETX H 403 6 HET EDO H 404 4 HET PGE H 406 10 HET NDG U 400 15 HET PG4 U 402 13 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETNAM ETX 2-ETHOXYETHANOL HETNAM EDO 1,2-ETHANEDIOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM NDG 2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL HETSYN NDG N-ACETYL-ALPHA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NDG ALPHA-D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2- HETSYN 3 NDG ACETAMIDO-2-DEOXY-GLUCOSE; 2-(ACETYLAMINO)-2-DEOXY-A- HETSYN 4 NDG D-GLUCOPYRANOSE FORMUL 5 NAG 3(C8 H15 N O6) FORMUL 5 FUC C6 H12 O5 FORMUL 7 SO4 O4 S 2- FORMUL 8 ETX 3(C4 H10 O2) FORMUL 9 EDO 2(C2 H6 O2) FORMUL 13 PGE C6 H14 O4 FORMUL 14 NDG C8 H15 N O6 FORMUL 15 PG4 C8 H18 O5 FORMUL 16 HOH *336(H2 O) HELIX 1 1 THR A 78 GLN A 82 5 5 HELIX 2 2 ASP A 90 GLY A 95 1 6 HELIX 3 3 GLU L 79 ALA L 83 5 5 HELIX 4 4 SER L 120 SER L 126 1 7 HELIX 5 5 LYS L 182 ARG L 187 1 6 HELIX 6 6 SER H 28 ASN H 31 5 4 HELIX 7 7 GLU H 61 LYS H 64 5 4 HELIX 8 8 THR H 73 SER H 75 5 3 HELIX 9 9 THR H 83 SER H 87 5 5 HELIX 10 10 SER H 151 SER H 153 5 3 HELIX 11 11 PRO H 195 SER H 198 5 4 HELIX 12 12 GLU U 183 LEU U 187 5 5 HELIX 13 13 ALA U 244 CYS U 247 5 4 HELIX 14 14 LEU U 252 SER U 257 5 6 SHEET 1 A 2 THR A 18 SER A 21 0 SHEET 2 A 2 HIS A 29 ASN A 32 -1 O ASN A 32 N THR A 18 SHEET 1 B 2 PHE A 37 GLY A 38 0 SHEET 2 B 2 ILE A 44 ASP A 45 -1 O ILE A 44 N GLY A 38 SHEET 1 C 2 TRP A 112 VAL A 117 0 SHEET 2 C 2 LYS A 120 GLU A 125 -1 O LEU A 122 N VAL A 115 SHEET 1 D 4 LEU L 4 SER L 7 0 SHEET 2 D 4 VAL L 19 ALA L 25 -1 O SER L 24 N THR L 5 SHEET 3 D 4 SER L 70 ILE L 75 -1 O TYR L 71 N CYS L 23 SHEET 4 D 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 E 6 ILE L 10 ALA L 13 0 SHEET 2 E 6 THR L 102 ILE L 106 1 O GLU L 105 N THR L 11 SHEET 3 E 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 E 6 MET L 33 GLN L 38 -1 N GLN L 38 O ILE L 85 SHEET 5 E 6 LYS L 45 PHE L 49 -1 O ILE L 48 N TRP L 35 SHEET 6 E 6 LYS L 53 LEU L 54 -1 O LYS L 53 N PHE L 49 SHEET 1 F 4 THR L 113 PHE L 117 0 SHEET 2 F 4 GLY L 128 PHE L 138 -1 O VAL L 132 N PHE L 117 SHEET 3 F 4 TYR L 172 THR L 181 -1 O LEU L 178 N VAL L 131 SHEET 4 F 4 VAL L 158 TRP L 162 -1 N LEU L 159 O THR L 177 SHEET 1 G 4 SER L 152 ARG L 154 0 SHEET 2 G 4 ASN L 144 ILE L 149 -1 N ILE L 149 O SER L 152 SHEET 3 G 4 SER L 190 THR L 196 -1 O THR L 196 N ASN L 144 SHEET 4 G 4 ILE L 204 ASN L 209 -1 O LYS L 206 N CYS L 193 SHEET 1 H 4 LYS H 3 GLN H 6 0 SHEET 2 H 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 H 4 THR H 77 LEU H 82 -1 O LEU H 82 N VAL H 18 SHEET 4 H 4 ALA H 67 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 I 6 GLU H 10 VAL H 12 0 SHEET 2 I 6 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 I 6 ALA H 88 TRP H 95 -1 N ALA H 88 O VAL H 109 SHEET 4 I 6 TYR H 33 GLN H 39 -1 N HIS H 35 O ALA H 93 SHEET 5 I 6 GLU H 46 PHE H 52 -1 O ILE H 48 N TRP H 36 SHEET 6 I 6 THR H 57 TYR H 59 -1 O GLU H 58 N TRP H 50 SHEET 1 J 4 GLU H 10 VAL H 12 0 SHEET 2 J 4 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 J 4 ALA H 88 TRP H 95 -1 N ALA H 88 O VAL H 109 SHEET 4 J 4 PHE H 100A TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 K 4 SER H 120 PRO H 123 0 SHEET 2 K 4 CYS H 135 TYR H 140 -1 O LEU H 136 N TYR H 122 SHEET 3 K 4 LEU H 169 VAL H 176 -1 O LEU H 172 N VAL H 137 SHEET 4 K 4 VAL H 158 THR H 160 -1 N HIS H 159 O SER H 175 SHEET 1 L 4 SER H 120 PRO H 123 0 SHEET 2 L 4 CYS H 135 TYR H 140 -1 O LEU H 136 N TYR H 122 SHEET 3 L 4 LEU H 169 VAL H 176 -1 O LEU H 172 N VAL H 137 SHEET 4 L 4 VAL H 164 GLN H 166 -1 N GLN H 166 O LEU H 169 SHEET 1 M 3 THR H 146 TRP H 149 0 SHEET 2 M 3 THR H 189 HIS H 194 -1 O ASN H 191 N THR H 148 SHEET 3 M 3 THR H 199 LYS H 204 -1 O VAL H 201 N VAL H 192 SHEET 1 N 2 ARG U 2 CYS U 6 0 SHEET 2 N 2 CYS U 12 GLU U 16 -1 O ARG U 13 N GLN U 5 SHEET 1 O11 LEU U 38 THR U 46 0 SHEET 2 O11 LEU U 23 TRP U 32 -1 N LEU U 23 O THR U 46 SHEET 3 O11 LYS U 62 CYS U 71 -1 O CYS U 71 N CYS U 24 SHEET 4 O11 ARG U 53 THR U 59 -1 N LEU U 55 O LEU U 66 SHEET 5 O11 HIS U 143 TYR U 149 -1 O CYS U 147 N SER U 56 SHEET 6 O11 GLN U 121 HIS U 128 -1 N GLN U 121 O GLY U 148 SHEET 7 O11 THR U 164 CYS U 171 -1 O PHE U 167 N VAL U 126 SHEET 8 O11 GLY U 155 ASN U 161 -1 N GLY U 155 O CYS U 170 SHEET 9 O11 GLN U 234 ALA U 242 -1 O CYS U 241 N HIS U 160 SHEET 10 O11 GLN U 189 GLY U 199 -1 N GLY U 199 O MET U 237 SHEET 11 O11 PHE U 211 ARG U 216 -1 O CYS U 215 N ARG U 192 SHEET 1 P 9 GLN U 111 GLN U 114 0 SHEET 2 P 9 GLU U 94 GLY U 99 -1 N SER U 97 O GLN U 111 SHEET 3 P 9 HIS U 143 TYR U 149 -1 O ARG U 145 N CYS U 98 SHEET 4 P 9 GLN U 121 HIS U 128 -1 N GLN U 121 O GLY U 148 SHEET 5 P 9 THR U 164 CYS U 171 -1 O PHE U 167 N VAL U 126 SHEET 6 P 9 GLY U 155 ASN U 161 -1 N GLY U 155 O CYS U 170 SHEET 7 P 9 GLN U 234 ALA U 242 -1 O CYS U 241 N HIS U 160 SHEET 8 P 9 GLN U 221 HIS U 229 -1 N ALA U 225 O VAL U 238 SHEET 9 P 9 ASP U 262 CYS U 266 -1 O CYS U 266 N CYS U 222 SSBOND 1 CYS A 13 CYS A 31 1555 1555 2.03 SSBOND 2 CYS A 33 CYS A 42 1555 1555 2.03 SSBOND 3 CYS A 50 CYS A 131 1555 1555 2.03 SSBOND 4 CYS A 71 CYS A 113 1555 1555 2.04 SSBOND 5 CYS A 102 CYS A 126 1555 1555 2.03 SSBOND 6 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 7 CYS L 133 CYS L 193 1555 1555 2.03 SSBOND 8 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 9 CYS H 135 CYS H 190 1555 1555 2.04 SSBOND 10 CYS U 3 CYS U 24 1555 1555 2.03 SSBOND 11 CYS U 6 CYS U 12 1555 1555 2.05 SSBOND 12 CYS U 17 CYS U 45 1555 1555 2.03 SSBOND 13 CYS U 71 CYS U 76 1555 1555 2.04 SSBOND 14 CYS U 95 CYS U 122 1555 1555 2.03 SSBOND 15 CYS U 98 CYS U 105 1555 1555 2.04 SSBOND 16 CYS U 115 CYS U 147 1555 1555 2.04 SSBOND 17 CYS U 153 CYS U 170 1555 1555 2.04 SSBOND 18 CYS U 171 CYS U 176 1555 1555 2.04 SSBOND 19 CYS U 194 CYS U 222 1555 1555 2.03 SSBOND 20 CYS U 197 CYS U 205 1555 1555 2.05 SSBOND 21 CYS U 215 CYS U 241 1555 1555 2.03 SSBOND 22 CYS U 247 CYS U 265 1555 1555 2.03 SSBOND 23 CYS U 266 CYS U 271 1555 1555 2.03 LINK ND2 ASN U 52 C1 NAG B 1 1555 1555 1.68 LINK ND2 ASN U 172 C1 NAG C 1 1555 1555 1.99 LINK O6 NAG B 1 C1 FUC B 2 1555 1555 1.14 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.55 CISPEP 1 SER L 7 PRO L 8 0 0.04 CISPEP 2 TYR L 139 PRO L 140 0 0.00 CISPEP 3 PHE H 141 PRO H 142 0 -0.04 CISPEP 4 GLU H 143 PRO H 144 0 -0.41 CISPEP 5 TRP H 183 PRO H 184 0 -0.23 CRYST1 51.792 86.805 124.690 90.00 94.54 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019308 0.000000 0.001533 0.00000 SCALE2 0.000000 0.011520 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008045 0.00000