PDB Short entry for 2FJU HEADER SIGNALING PROTEIN,APOPTOSIS/HYDROLASE 03-JAN-06 2FJU TITLE ACTIVATED RAC1 BOUND TO ITS EFFECTOR PHOSPHOLIPASE C BETA 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-189; COMPND 5 SYNONYM: P21-RAC1; RAS-LIKE PROTEIN TC25; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE COMPND 9 BETA 2; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: RESIDUES 1-799; COMPND 12 SYNONYM: PHOSPHOINOSITIDE PHOSPHOLIPASE C; PHOSPHOLIPASE C- BETA-2; COMPND 13 PLC-BETA-2; COMPND 14 EC: 3.1.4.11; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: PLCB2; SOURCE 14 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 15 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: SF21; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PVL1392 KEYWDS PROTEIN-PROTEIN COMPLEX, SIGNALING PROTEIN, APOPTOSIS-HYDROLASE KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.R.JEZYK,J.T.SNYDER,T.K.HARDEN,J.SONDEK REVDAT 4 14-FEB-24 2FJU 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 2FJU 1 VERSN REVDAT 2 13-FEB-07 2FJU 1 JRNL REVDAT 1 21-NOV-06 2FJU 0 JRNL AUTH M.R.JEZYK,J.T.SNYDER,S.GERSHBERG,D.K.WORTHYLAKE,T.K.HARDEN, JRNL AUTH 2 J.SONDEK JRNL TITL CRYSTAL STRUCTURE OF RAC1 BOUND TO ITS EFFECTOR JRNL TITL 2 PHOSPHOLIPASE C-BETA2. JRNL REF NAT.STRUCT.MOL.BIOL. V. 13 1135 2006 JRNL REFN ISSN 1545-9993 JRNL PMID 17115053 JRNL DOI 10.1038/NSMB1175 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 93710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4701 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6994 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 486 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FJU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000035962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.009 REMARK 200 MONOCHROMATOR : SI 220 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93710 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR, MAD, MR REMARK 200 SOFTWARE USED: MLPHARE, SHELX, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 3350, PH 8.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.54867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.27433 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.27433 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 62.54867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 178 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LEU B 3 REMARK 465 LEU B 4 REMARK 465 ASN B 5 REMARK 465 PRO B 6 REMARK 465 VAL B 7 REMARK 465 LEU B 8 REMARK 465 LEU B 9 REMARK 465 PRO B 10 REMARK 465 TYR B 228 REMARK 465 HIS B 229 REMARK 465 ALA B 230 REMARK 465 LYS B 231 REMARK 465 ALA B 232 REMARK 465 LYS B 233 REMARK 465 PRO B 234 REMARK 465 SER B 252 REMARK 465 ARG B 253 REMARK 465 LEU B 254 REMARK 465 ASN B 255 REMARK 465 SER B 256 REMARK 465 LEU B 257 REMARK 465 LEU B 258 REMARK 465 PHE B 259 REMARK 465 PRO B 260 REMARK 465 PRO B 261 REMARK 465 ALA B 262 REMARK 465 ARG B 263 REMARK 465 PRO B 264 REMARK 465 ASP B 265 REMARK 465 GLN B 266 REMARK 465 VAL B 267 REMARK 465 GLY B 278 REMARK 465 ILE B 279 REMARK 465 ASN B 280 REMARK 465 ALA B 281 REMARK 465 GLN B 282 REMARK 465 ARG B 283 REMARK 465 ASN B 465 REMARK 465 GLN B 466 REMARK 465 PHE B 467 REMARK 465 SER B 468 REMARK 465 GLY B 469 REMARK 465 PRO B 470 REMARK 465 THR B 471 REMARK 465 SER B 472 REMARK 465 SER B 473 REMARK 465 SER B 474 REMARK 465 LYS B 475 REMARK 465 ASP B 476 REMARK 465 THR B 477 REMARK 465 GLY B 478 REMARK 465 GLY B 479 REMARK 465 GLU B 480 REMARK 465 ALA B 481 REMARK 465 GLU B 482 REMARK 465 GLY B 483 REMARK 465 SER B 484 REMARK 465 SER B 485 REMARK 465 PRO B 486 REMARK 465 PRO B 487 REMARK 465 SER B 488 REMARK 465 ALA B 489 REMARK 465 PRO B 490 REMARK 465 ALA B 491 REMARK 465 VAL B 492 REMARK 465 TRP B 493 REMARK 465 ALA B 494 REMARK 465 GLY B 495 REMARK 465 GLU B 496 REMARK 465 GLU B 497 REMARK 465 GLY B 498 REMARK 465 THR B 499 REMARK 465 GLU B 500 REMARK 465 LEU B 501 REMARK 465 GLU B 502 REMARK 465 GLU B 503 REMARK 465 GLU B 504 REMARK 465 GLU B 505 REMARK 465 VAL B 506 REMARK 465 GLU B 507 REMARK 465 GLU B 508 REMARK 465 GLU B 509 REMARK 465 GLU B 510 REMARK 465 GLU B 511 REMARK 465 ASP B 661 REMARK 465 LYS B 662 REMARK 465 GLN B 663 REMARK 465 PHE B 664 REMARK 465 ASN B 665 REMARK 465 PRO B 666 REMARK 465 PHE B 667 REMARK 465 SER B 668 REMARK 465 VAL B 669 REMARK 465 ASP B 670 REMARK 465 ARG B 671 REMARK 465 ILE B 672 REMARK 465 ASP B 673 REMARK 465 VAL B 674 REMARK 465 VAL B 675 REMARK 465 VAL B 676 REMARK 465 ALA B 677 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 277 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY B 193 N ASN B 195 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP B 196 C ALA B 197 N 0.145 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 192 O - C - N ANGL. DEV. = -34.2 DEGREES REMARK 500 GLY B 193 C - N - CA ANGL. DEV. = -19.5 DEGREES REMARK 500 GLY B 193 O - C - N ANGL. DEV. = -18.8 DEGREES REMARK 500 ASN B 195 O - C - N ANGL. DEV. = -21.0 DEGREES REMARK 500 ASP B 196 C - N - CA ANGL. DEV. = 17.9 DEGREES REMARK 500 GLY B 334 C - N - CA ANGL. DEV. = 40.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 36 -60.72 -102.49 REMARK 500 PHE A 37 145.87 -171.08 REMARK 500 ALA A 42 128.21 -171.80 REMARK 500 LYS A 96 -66.38 -124.84 REMARK 500 GLU B 29 -141.87 -120.56 REMARK 500 LYS B 54 -0.82 87.33 REMARK 500 ASP B 106 -169.86 -161.06 REMARK 500 ASN B 300 68.97 -112.64 REMARK 500 ASN B 328 54.93 32.84 REMARK 500 ALA B 333 -123.27 -125.05 REMARK 500 THR B 377 -159.06 -130.19 REMARK 500 SER B 413 112.42 -160.86 REMARK 500 ASP B 528 -94.28 -119.91 REMARK 500 ASN B 547 -72.64 -140.25 REMARK 500 ALA B 584 53.83 -146.15 REMARK 500 PHE B 689 53.91 38.06 REMARK 500 ASN B 726 55.47 -147.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 29 THR B 30 146.58 REMARK 500 ALA B 333 GLY B 334 123.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS B 192 -37.01 REMARK 500 GLY B 193 27.51 REMARK 500 ASN B 195 -32.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 179 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 17 OG1 REMARK 620 2 THR A 35 OG1 68.5 REMARK 620 3 HOH A1010 O 55.3 54.5 REMARK 620 4 GSP A2466 O2B 70.6 110.4 56.0 REMARK 620 5 GSP A2466 O2G 110.1 71.6 54.8 73.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1000 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 328 OD1 REMARK 620 2 GLU B 357 OE2 91.2 REMARK 620 3 ASP B 359 OD2 79.4 134.1 REMARK 620 4 ASP B 359 OD1 91.2 86.3 49.6 REMARK 620 5 GLU B 408 OE1 173.9 93.5 94.6 85.4 REMARK 620 6 HOH B1073 O 90.0 156.6 69.0 117.0 87.1 REMARK 620 7 HOH B1136 O 88.6 79.5 143.9 165.8 96.0 77.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 179 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSP A 2466 DBREF 2FJU A 1 177 UNP P63000 RAC1_HUMAN 1 177 DBREF 2FJU B 1 799 UNP Q00722 PLCB2_HUMAN 1 799 SEQADV 2FJU SER A 178 UNP P63000 INSERTION SEQRES 1 A 178 MET GLN ALA ILE LYS CYS VAL VAL VAL GLY ASP GLY ALA SEQRES 2 A 178 VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR ASN SEQRES 3 A 178 ALA PHE PRO GLY GLU TYR ILE PRO THR VAL PHE ASP ASN SEQRES 4 A 178 TYR SER ALA ASN VAL MET VAL ASP GLY LYS PRO VAL ASN SEQRES 5 A 178 LEU GLY LEU TRP ASP THR ALA GLY GLN GLU ASP TYR ASP SEQRES 6 A 178 ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL PHE SEQRES 7 A 178 LEU ILE CYS PHE SER LEU VAL SER PRO ALA SER PHE GLU SEQRES 8 A 178 ASN VAL ARG ALA LYS TRP TYR PRO GLU VAL ARG HIS HIS SEQRES 9 A 178 CYS PRO ASN THR PRO ILE ILE LEU VAL GLY THR LYS LEU SEQRES 10 A 178 ASP LEU ARG ASP ASP LYS ASP THR ILE GLU LYS LEU LYS SEQRES 11 A 178 GLU LYS LYS LEU THR PRO ILE THR TYR PRO GLN GLY LEU SEQRES 12 A 178 ALA MET ALA LYS GLU ILE GLY ALA VAL LYS TYR LEU GLU SEQRES 13 A 178 CYS SER ALA LEU THR GLN ARG GLY LEU LYS THR VAL PHE SEQRES 14 A 178 ASP GLU ALA ILE ARG ALA VAL LEU SER SEQRES 1 B 799 MET SER LEU LEU ASN PRO VAL LEU LEU PRO PRO LYS VAL SEQRES 2 B 799 LYS ALA TYR LEU SER GLN GLY GLU ARG PHE ILE LYS TRP SEQRES 3 B 799 ASP ASP GLU THR THR VAL ALA SER PRO VAL ILE LEU ARG SEQRES 4 B 799 VAL ASP PRO LYS GLY TYR TYR LEU TYR TRP THR TYR GLN SEQRES 5 B 799 SER LYS GLU MET GLU PHE LEU ASP ILE THR SER ILE ARG SEQRES 6 B 799 ASP THR ARG PHE GLY LYS PHE ALA LYS MET PRO LYS SER SEQRES 7 B 799 GLN LYS LEU ARG ASP VAL PHE ASN MET ASP PHE PRO ASP SEQRES 8 B 799 ASN SER PHE LEU LEU LYS THR LEU THR VAL VAL SER GLY SEQRES 9 B 799 PRO ASP MET VAL ASP LEU THR PHE HIS ASN PHE VAL SER SEQRES 10 B 799 TYR LYS GLU ASN VAL GLY LYS ALA TRP ALA GLU ASP VAL SEQRES 11 B 799 LEU ALA LEU VAL LYS HIS PRO LEU THR ALA ASN ALA SER SEQRES 12 B 799 ARG SER THR PHE LEU ASP LYS ILE LEU VAL LYS LEU LYS SEQRES 13 B 799 MET GLN LEU ASN SER GLU GLY LYS ILE PRO VAL LYS ASN SEQRES 14 B 799 PHE PHE GLN MET PHE PRO ALA ASP ARG LYS ARG VAL GLU SEQRES 15 B 799 ALA ALA LEU SER ALA CYS HIS LEU PRO LYS GLY LYS ASN SEQRES 16 B 799 ASP ALA ILE ASN PRO GLU ASP PHE PRO GLU PRO VAL TYR SEQRES 17 B 799 LYS SER PHE LEU MET SER LEU CYS PRO ARG PRO GLU ILE SEQRES 18 B 799 ASP GLU ILE PHE THR SER TYR HIS ALA LYS ALA LYS PRO SEQRES 19 B 799 TYR MET THR LYS GLU HIS LEU THR LYS PHE ILE ASN GLN SEQRES 20 B 799 LYS GLN ARG ASP SER ARG LEU ASN SER LEU LEU PHE PRO SEQRES 21 B 799 PRO ALA ARG PRO ASP GLN VAL GLN GLY LEU ILE ASP LYS SEQRES 22 B 799 TYR GLU PRO SER GLY ILE ASN ALA GLN ARG GLY GLN LEU SEQRES 23 B 799 SER PRO GLU GLY MET VAL TRP PHE LEU CYS GLY PRO GLU SEQRES 24 B 799 ASN SER VAL LEU ALA GLN ASP LYS LEU LEU LEU HIS HIS SEQRES 25 B 799 ASP MET THR GLN PRO LEU ASN HIS TYR PHE ILE ASN SER SEQRES 26 B 799 SER HIS ASN THR TYR LEU THR ALA GLY GLN PHE SER GLY SEQRES 27 B 799 LEU SER SER ALA GLU MET TYR ARG GLN VAL LEU LEU SER SEQRES 28 B 799 GLY CYS ARG CYS VAL GLU LEU ASP CYS TRP LYS GLY LYS SEQRES 29 B 799 PRO PRO ASP GLU GLU PRO ILE ILE THR HIS GLY PHE THR SEQRES 30 B 799 MET THR THR ASP ILE PHE PHE LYS GLU ALA ILE GLU ALA SEQRES 31 B 799 ILE ALA GLU SER ALA PHE LYS THR SER PRO TYR PRO ILE SEQRES 32 B 799 ILE LEU SER PHE GLU ASN HIS VAL ASP SER PRO ARG GLN SEQRES 33 B 799 GLN ALA LYS MET ALA GLU TYR CYS ARG THR ILE PHE GLY SEQRES 34 B 799 ASP MET LEU LEU THR GLU PRO LEU GLU LYS PHE PRO LEU SEQRES 35 B 799 LYS PRO GLY VAL PRO LEU PRO SER PRO GLU ASP LEU ARG SEQRES 36 B 799 GLY LYS ILE LEU ILE LYS ASN LYS LYS ASN GLN PHE SER SEQRES 37 B 799 GLY PRO THR SER SER SER LYS ASP THR GLY GLY GLU ALA SEQRES 38 B 799 GLU GLY SER SER PRO PRO SER ALA PRO ALA VAL TRP ALA SEQRES 39 B 799 GLY GLU GLU GLY THR GLU LEU GLU GLU GLU GLU VAL GLU SEQRES 40 B 799 GLU GLU GLU GLU GLU GLU SER GLY ASN LEU ASP GLU GLU SEQRES 41 B 799 GLU ILE LYS LYS MET GLN SER ASP GLU GLY THR ALA GLY SEQRES 42 B 799 LEU GLU VAL THR ALA TYR GLU GLU MET SER SER LEU VAL SEQRES 43 B 799 ASN TYR ILE GLN PRO THR LYS PHE VAL SER PHE GLU PHE SEQRES 44 B 799 SER ALA GLN LYS ASN ARG SER TYR VAL ILE SER SER PHE SEQRES 45 B 799 THR GLU LEU LYS ALA TYR ASP LEU LEU SER LYS ALA SER SEQRES 46 B 799 VAL GLN PHE VAL ASP TYR ASN LYS ARG GLN MET SER ARG SEQRES 47 B 799 ILE TYR PRO LYS GLY THR ARG MET ASP SER SER ASN TYR SEQRES 48 B 799 MET PRO GLN MET PHE TRP ASN ALA GLY CYS GLN MET VAL SEQRES 49 B 799 ALA LEU ASN PHE GLN THR MET ASP LEU PRO MET GLN GLN SEQRES 50 B 799 ASN MET ALA VAL PHE GLU PHE ASN GLY GLN SER GLY TYR SEQRES 51 B 799 LEU LEU LYS HIS GLU PHE MET ARG ARG PRO ASP LYS GLN SEQRES 52 B 799 PHE ASN PRO PHE SER VAL ASP ARG ILE ASP VAL VAL VAL SEQRES 53 B 799 ALA THR THR LEU SER ILE THR VAL ILE SER GLY GLN PHE SEQRES 54 B 799 LEU SER GLU ARG SER VAL ARG THR TYR VAL GLU VAL GLU SEQRES 55 B 799 LEU PHE GLY LEU PRO GLY ASP PRO LYS ARG ARG TYR ARG SEQRES 56 B 799 THR LYS LEU SER PRO SER THR ASN SER ILE ASN PRO VAL SEQRES 57 B 799 TRP LYS GLU GLU PRO PHE VAL PHE GLU LYS ILE LEU MET SEQRES 58 B 799 PRO GLU LEU ALA SER LEU ARG VAL ALA VAL MET GLU GLU SEQRES 59 B 799 GLY ASN LYS PHE LEU GLY HIS ARG ILE ILE PRO ILE ASN SEQRES 60 B 799 ALA LEU ASN SER GLY TYR HIS HIS LEU CYS LEU HIS SER SEQRES 61 B 799 GLU SER ASN MET PRO LEU THR MET PRO ALA LEU PHE ILE SEQRES 62 B 799 PHE LEU GLU MET LYS ASP HET MG A 179 1 HET GSP A2466 32 HET CA B1000 1 HETNAM MG MAGNESIUM ION HETNAM GSP 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE HETNAM CA CALCIUM ION FORMUL 3 MG MG 2+ FORMUL 4 GSP C10 H16 N5 O13 P3 S FORMUL 5 CA CA 2+ FORMUL 6 HOH *486(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 GLN A 61 ASP A 65 5 5 HELIX 3 3 LEU A 67 TYR A 72 5 6 HELIX 4 4 SER A 86 LYS A 96 1 11 HELIX 5 5 LYS A 96 CYS A 105 1 10 HELIX 6 6 LYS A 116 ARG A 120 5 5 HELIX 7 7 ASP A 122 LYS A 132 1 11 HELIX 8 8 THR A 138 GLY A 150 1 13 HELIX 9 9 GLY A 164 ALA A 175 1 12 HELIX 10 10 LYS B 14 GLY B 20 1 7 HELIX 11 11 LYS B 71 ALA B 73 5 3 HELIX 12 12 SER B 78 PHE B 85 1 8 HELIX 13 13 SER B 93 LEU B 96 5 4 HELIX 14 14 ASN B 121 LYS B 135 1 15 HELIX 15 15 HIS B 136 ASN B 141 1 6 HELIX 16 16 SER B 143 GLN B 158 1 16 HELIX 17 17 VAL B 167 PHE B 174 1 8 HELIX 18 18 ASP B 177 CYS B 188 1 12 HELIX 19 19 ASN B 199 PHE B 203 5 5 HELIX 20 20 PRO B 206 CYS B 216 1 11 HELIX 21 21 ARG B 218 SER B 227 1 10 HELIX 22 22 THR B 237 LYS B 248 1 12 HELIX 23 23 GLN B 268 GLU B 275 1 8 HELIX 24 24 SER B 287 GLY B 297 1 11 HELIX 25 25 ALA B 304 LEU B 309 5 6 HELIX 26 26 PRO B 317 ASN B 319 5 3 HELIX 27 27 ALA B 342 SER B 351 1 10 HELIX 28 28 PHE B 384 ALA B 395 1 12 HELIX 29 29 SER B 413 GLY B 429 1 17 HELIX 30 30 ASP B 430 LEU B 432 5 3 HELIX 31 31 GLU B 529 LEU B 534 5 6 HELIX 32 32 TYR B 539 SER B 544 1 6 HELIX 33 33 SER B 556 ASN B 564 1 9 HELIX 34 34 GLU B 574 GLN B 595 1 22 HELIX 35 35 PRO B 613 ALA B 619 1 7 HELIX 36 36 ASP B 632 PHE B 642 1 11 HELIX 37 37 GLU B 643 SER B 648 5 6 HELIX 38 38 HIS B 654 ARG B 658 5 5 HELIX 39 39 MET B 741 LEU B 744 5 4 HELIX 40 40 ASN B 767 LEU B 769 5 3 SHEET 1 A 6 PHE A 37 MET A 45 0 SHEET 2 A 6 PRO A 50 THR A 58 -1 O LEU A 55 N TYR A 40 SHEET 3 A 6 GLN A 2 GLY A 10 1 N CYS A 6 O TRP A 56 SHEET 4 A 6 VAL A 77 SER A 83 1 O CYS A 81 N VAL A 9 SHEET 5 A 6 ILE A 110 THR A 115 1 O VAL A 113 N ILE A 80 SHEET 6 A 6 LYS A 153 GLU A 156 1 O LEU A 155 N GLY A 114 SHEET 1 B 7 MET B 56 ASP B 60 0 SHEET 2 B 7 TYR B 46 TYR B 51 -1 N LEU B 47 O LEU B 59 SHEET 3 B 7 ALA B 33 VAL B 40 -1 N ARG B 39 O TYR B 48 SHEET 4 B 7 GLU B 21 TRP B 26 -1 N LYS B 25 O SER B 34 SHEET 5 B 7 THR B 111 SER B 117 -1 O VAL B 116 N ILE B 24 SHEET 6 B 7 THR B 98 SER B 103 -1 N LEU B 99 O PHE B 115 SHEET 7 B 7 ILE B 64 PHE B 69 -1 N ARG B 65 O VAL B 102 SHEET 1 C 2 ILE B 165 PRO B 166 0 SHEET 2 C 2 ALA B 197 ILE B 198 -1 O ILE B 198 N ILE B 165 SHEET 1 D 2 TYR B 321 ILE B 323 0 SHEET 2 D 2 TYR B 650 LEU B 652 -1 O LEU B 651 N PHE B 322 SHEET 1 E 5 ILE B 382 PHE B 383 0 SHEET 2 E 5 ILE B 371 ILE B 372 -1 N ILE B 372 O ILE B 382 SHEET 3 E 5 CYS B 355 TRP B 361 -1 N TRP B 361 O ILE B 371 SHEET 4 E 5 ILE B 403 ASN B 409 1 O SER B 406 N VAL B 356 SHEET 5 E 5 ILE B 458 LYS B 461 1 O LEU B 459 N LEU B 405 SHEET 1 F 4 GLN B 550 PRO B 551 0 SHEET 2 F 4 VAL B 568 THR B 573 1 O ILE B 569 N GLN B 550 SHEET 3 F 4 MET B 596 TYR B 600 1 O ARG B 598 N PHE B 572 SHEET 4 F 4 MET B 623 VAL B 624 1 O MET B 623 N ILE B 599 SHEET 1 G 4 PHE B 734 PHE B 736 0 SHEET 2 G 4 THR B 679 GLN B 688 -1 N LEU B 680 O PHE B 736 SHEET 3 G 4 PRO B 785 LYS B 798 -1 O LYS B 798 N THR B 679 SHEET 4 G 4 GLY B 772 HIS B 779 -1 N LEU B 776 O LEU B 791 SHEET 1 H 4 TYR B 714 ARG B 715 0 SHEET 2 H 4 THR B 697 PHE B 704 -1 N VAL B 701 O TYR B 714 SHEET 3 H 4 SER B 746 GLU B 753 -1 O MET B 752 N TYR B 698 SHEET 4 H 4 LYS B 757 PRO B 765 -1 O GLY B 760 N VAL B 751 LINK OG1 THR A 17 MG MG A 179 1555 1555 2.45 LINK OG1 THR A 35 MG MG A 179 1555 1555 2.51 LINK MG MG A 179 O HOH A1010 1555 1555 3.02 LINK MG MG A 179 O2B GSP A2466 1555 1555 2.64 LINK MG MG A 179 O2G GSP A2466 1555 1555 2.43 LINK OD1 ASN B 328 CA CA B1000 1555 1555 2.44 LINK OE2 GLU B 357 CA CA B1000 1555 1555 2.47 LINK OD2 ASP B 359 CA CA B1000 1555 1555 2.67 LINK OD1 ASP B 359 CA CA B1000 1555 1555 2.58 LINK OE1 GLU B 408 CA CA B1000 1555 1555 2.43 LINK CA CA B1000 O HOH B1073 1555 1555 2.54 LINK CA CA B1000 O HOH B1136 1555 1555 2.60 CISPEP 1 GLU B 205 PRO B 206 0 0.35 CISPEP 2 PRO B 365 PRO B 366 0 0.30 SITE 1 AC1 5 THR A 17 ILE A 33 THR A 35 HOH A1010 SITE 2 AC1 5 GSP A2466 SITE 1 AC2 6 ASN B 328 GLU B 357 ASP B 359 GLU B 408 SITE 2 AC2 6 HOH B1073 HOH B1136 SITE 1 AC3 21 GLY A 12 ALA A 13 VAL A 14 GLY A 15 SITE 2 AC3 21 LYS A 16 THR A 17 CYS A 18 PHE A 28 SITE 3 AC3 21 TYR A 32 THR A 35 GLY A 60 LYS A 116 SITE 4 AC3 21 ASP A 118 LEU A 119 SER A 158 ALA A 159 SITE 5 AC3 21 LEU A 160 MG A 179 HOH A1010 HOH A1233 SITE 6 AC3 21 HOH A1245 CRYST1 185.822 185.822 93.823 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005381 0.003107 0.000000 0.00000 SCALE2 0.000000 0.006214 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010658 0.00000