PDB Short entry for 2FW0 HEADER TRANSPORT PROTEIN 31-JAN-06 2FW0 TITLE APO OPEN FORM OF GLUCOSE/GALACTOSE BINDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-GALACTOSE-BINDING PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GBP, D-GALACTOSE/ D-GLUCOSE-BINDING PROTEIN, GGBP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: MGLB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HB929; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PVB2 KEYWDS PERIPLASMIC BINDING PROTEIN, HINGE, CHEMOTAXIS, TRANSPORT, GGBP, KEYWDS 2 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.BORROK,L.L.KIESSLING,K.T.FOREST REVDAT 5 30-AUG-23 2FW0 1 REMARK LINK REVDAT 4 29-APR-15 2FW0 1 HETSYN VERSN REVDAT 3 24-FEB-09 2FW0 1 VERSN REVDAT 2 21-AUG-07 2FW0 1 JRNL REVDAT 1 06-FEB-07 2FW0 0 JRNL AUTH M.J.BORROK,L.L.KIESSLING,K.T.FOREST JRNL TITL CONFORMATIONAL CHANGES OF GLUCOSE/GALACTOSE-BINDING PROTEIN JRNL TITL 2 ILLUMINATED BY OPEN, UNLIGANDED, AND ULTRA-HIGH-RESOLUTION JRNL TITL 3 LIGAND-BOUND STRUCTURES. JRNL REF PROTEIN SCI. V. 16 1032 2007 JRNL REFN ISSN 0961-8368 JRNL PMID 17473016 JRNL DOI 10.1110/PS.062707807 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1415918.660 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 65661 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3306 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10226 REMARK 3 BIN R VALUE (WORKING SET) : 0.1630 REMARK 3 BIN FREE R VALUE : 0.1810 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 527 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.008 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2319 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : 1.74000 REMARK 3 B33 (A**2) : -1.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.14 REMARK 3 ESD FROM SIGMAA (A) : -0.0 REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.15 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.06 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.025 REMARK 3 BOND ANGLES (DEGREES) : 2.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.570 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.100 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.620 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.330 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.380 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.41 REMARK 3 BSOL : 43.28 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : CIT.PARAM REMARK 3 PARAMETER FILE 5 : MLA.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : CIT.TOP REMARK 3 TOPOLOGY FILE 5 : MLA.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FW0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036377. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GLOEBEL MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65759 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.18000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 8.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY: 2FVY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM NACITRATE, 2.5M AMSO4, 2.0 M REMARK 280 MALONATE CRYOPROTECTANT, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.40000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.05000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.15000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.05000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.40000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.15000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 SER A 307 REMARK 465 LYS A 308 REMARK 465 LYS A 309 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 13 O HOH A 666 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 634 O HOH A 812 4544 2.06 REMARK 500 O HOH A 673 O HOH A 818 4544 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 4 CG ARG A 4 CD 0.158 REMARK 500 ASN A 15 CB ASN A 15 CG 0.170 REMARK 500 ALA A 57 CA ALA A 57 CB -0.131 REMARK 500 LYS A 92 CE LYS A 92 NZ 0.168 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 21 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 81 NE - CZ - NH1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A 96 NE - CZ - NH1 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 96 NE - CZ - NH2 ANGL. DEV. = 4.5 DEGREES REMARK 500 ASP A 154 CB - CG - OD1 ANGL. DEV. = -5.9 DEGREES REMARK 500 LYS A 227 CD - CE - NZ ANGL. DEV. = -17.1 DEGREES REMARK 500 ARG A 292 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 13 46.61 -91.16 REMARK 500 ASN A 91 -32.02 66.09 REMARK 500 ASP A 236 -28.07 136.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 102 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 313 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 15 OD1 REMARK 620 2 CIT A 314 O1 99.0 REMARK 620 3 CIT A 314 O5 94.3 84.8 REMARK 620 4 CIT A 314 O7 151.2 76.4 57.2 REMARK 620 5 HOH A 687 O 106.3 84.8 158.2 101.6 REMARK 620 6 HOH A 822 O 95.4 164.2 87.7 87.9 97.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 311 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 110 O REMARK 620 2 TYR A 295 OH 99.5 REMARK 620 3 HOH A 507 O 163.5 96.5 REMARK 620 4 HOH A 517 O 79.2 169.7 85.6 REMARK 620 5 HOH A 547 O 90.8 98.6 83.3 91.6 REMARK 620 6 HOH A 809 O 102.8 85.7 81.8 84.7 164.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 310 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 134 OD1 REMARK 620 2 ASN A 136 OD1 85.0 REMARK 620 3 ASP A 138 OD2 88.7 74.8 REMARK 620 4 GLN A 140 O 96.9 154.4 79.8 REMARK 620 5 GLN A 142 OE1 169.9 88.7 97.3 92.2 REMARK 620 6 GLU A 205 OE1 90.0 77.0 151.8 128.3 80.9 REMARK 620 7 GLU A 205 OE2 98.1 129.0 155.6 76.1 79.8 52.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 312 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 228 O REMARK 620 2 ILE A 230 O 94.3 REMARK 620 3 HOH A 510 O 163.2 96.2 REMARK 620 4 HOH A 569 O 81.8 91.1 84.9 REMARK 620 5 HOH A 651 O 76.3 166.3 90.9 77.8 REMARK 620 6 HOH A 656 O 102.7 109.4 86.0 158.3 82.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A 315 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GBP RELATED DB: PDB REMARK 900 GLUCOSE BOUND GGBP E. COLI REMARK 900 RELATED ID: 1GCG RELATED DB: PDB REMARK 900 CLOSED UNLIGANDED SALMONELLA GGBP REMARK 900 RELATED ID: 1GLG RELATED DB: PDB REMARK 900 GALACTOSE BOUND GGBP E. COLI DBREF 2FW0 A 1 309 UNP P0AEE5 DGAL_ECOLI 24 332 SEQRES 1 A 309 ALA ASP THR ARG ILE GLY VAL THR ILE TYR LYS TYR ASP SEQRES 2 A 309 ASP ASN PHE MET SER VAL VAL ARG LYS ALA ILE GLU GLN SEQRES 3 A 309 ASP ALA LYS ALA ALA PRO ASP VAL GLN LEU LEU MET ASN SEQRES 4 A 309 ASP SER GLN ASN ASP GLN SER LYS GLN ASN ASP GLN ILE SEQRES 5 A 309 ASP VAL LEU LEU ALA LYS GLY VAL LYS ALA LEU ALA ILE SEQRES 6 A 309 ASN LEU VAL ASP PRO ALA ALA ALA GLY THR VAL ILE GLU SEQRES 7 A 309 LYS ALA ARG GLY GLN ASN VAL PRO VAL VAL PHE PHE ASN SEQRES 8 A 309 LYS GLU PRO SER ARG LYS ALA LEU ASP SER TYR ASP LYS SEQRES 9 A 309 ALA TYR TYR VAL GLY THR ASP SER LYS GLU SER GLY ILE SEQRES 10 A 309 ILE GLN GLY ASP LEU ILE ALA LYS HIS TRP ALA ALA ASN SEQRES 11 A 309 GLN GLY TRP ASP LEU ASN LYS ASP GLY GLN ILE GLN PHE SEQRES 12 A 309 VAL LEU LEU LYS GLY GLU PRO GLY HIS PRO ASP ALA GLU SEQRES 13 A 309 ALA ARG THR THR TYR VAL ILE LYS GLU LEU ASN ASP LYS SEQRES 14 A 309 GLY ILE LYS THR GLU GLN LEU GLN LEU ASP THR ALA MET SEQRES 15 A 309 TRP ASP THR ALA GLN ALA LYS ASP LYS MET ASP ALA TRP SEQRES 16 A 309 LEU SER GLY PRO ASN ALA ASN LYS ILE GLU VAL VAL ILE SEQRES 17 A 309 ALA ASN ASN ASP ALA MET ALA MET GLY ALA VAL GLU ALA SEQRES 18 A 309 LEU LYS ALA HIS ASN LYS SER SER ILE PRO VAL PHE GLY SEQRES 19 A 309 VAL ASP ALA LEU PRO GLU ALA LEU ALA LEU VAL LYS SER SEQRES 20 A 309 GLY ALA LEU ALA GLY THR VAL LEU ASN ASP ALA ASN ASN SEQRES 21 A 309 GLN ALA LYS ALA THR PHE ASP LEU ALA LYS ASN LEU ALA SEQRES 22 A 309 ASP GLY LYS GLY ALA ALA ASP GLY THR ASN TRP LYS ILE SEQRES 23 A 309 ASP ASN LYS VAL VAL ARG VAL PRO TYR VAL GLY VAL ASP SEQRES 24 A 309 LYS ASP ASN LEU ALA GLU PHE SER LYS LYS HET CA A 310 1 HET NA A 311 1 HET NA A 312 1 HET NA A 313 1 HET CIT A 314 13 HET MLA A 315 7 HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM CIT CITRIC ACID HETNAM MLA MALONIC ACID HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 2 CA CA 2+ FORMUL 3 NA 3(NA 1+) FORMUL 6 CIT C6 H8 O7 FORMUL 7 MLA C3 H4 O4 FORMUL 8 HOH *350(H2 O) HELIX 1 1 ASP A 14 ALA A 30 1 17 HELIX 2 2 ASP A 44 LYS A 58 1 15 HELIX 3 3 ASP A 69 ALA A 71 5 3 HELIX 4 4 ALA A 72 GLY A 82 1 11 HELIX 5 5 SER A 95 SER A 101 1 7 HELIX 6 6 SER A 112 ASN A 130 1 19 HELIX 7 7 GLN A 131 ASP A 134 5 4 HELIX 8 8 HIS A 152 LYS A 169 1 18 HELIX 9 9 ASP A 184 SER A 197 1 14 HELIX 10 10 ASN A 211 HIS A 225 1 15 HELIX 11 11 LEU A 238 SER A 247 1 10 HELIX 12 12 ASP A 257 ASP A 274 1 18 HELIX 13 13 ASN A 302 PHE A 306 5 5 SHEET 1 A 6 VAL A 34 ASP A 40 0 SHEET 2 A 6 THR A 3 ILE A 9 1 N VAL A 7 O LEU A 37 SHEET 3 A 6 ALA A 62 ILE A 65 1 O ALA A 64 N GLY A 6 SHEET 4 A 6 VAL A 87 PHE A 90 1 O VAL A 88 N LEU A 63 SHEET 5 A 6 ALA A 105 VAL A 108 1 O TYR A 106 N PHE A 89 SHEET 6 A 6 VAL A 290 VAL A 291 1 O VAL A 291 N TYR A 107 SHEET 1 B 4 THR A 173 THR A 180 0 SHEET 2 B 4 ILE A 141 LYS A 147 1 N ILE A 141 O GLU A 174 SHEET 3 B 4 VAL A 206 ALA A 209 1 O ILE A 208 N VAL A 144 SHEET 4 B 4 VAL A 232 PHE A 233 1 O PHE A 233 N ALA A 209 SHEET 1 C 2 THR A 253 LEU A 255 0 SHEET 2 C 2 VAL A 296 VAL A 298 -1 O VAL A 296 N LEU A 255 LINK OD1AASN A 15 NA NA A 313 1555 1555 2.40 LINK O THR A 110 NA NA A 311 1555 1555 2.35 LINK OD1 ASP A 134 CA CA A 310 1555 1555 2.29 LINK OD1 ASN A 136 CA CA A 310 1555 1555 2.42 LINK OD2 ASP A 138 CA CA A 310 1555 1555 2.43 LINK O GLN A 140 CA CA A 310 1555 1555 2.35 LINK OE1 GLN A 142 CA CA A 310 1555 1555 2.34 LINK OE1 GLU A 205 CA CA A 310 1555 1555 2.56 LINK OE2 GLU A 205 CA CA A 310 1555 1555 2.46 LINK O SER A 228 NA NA A 312 1555 1555 2.34 LINK O ILE A 230 NA NA A 312 1555 1555 2.33 LINK OH TYR A 295 NA NA A 311 1555 1555 2.59 LINK NA NA A 311 O HOH A 507 1555 1555 2.49 LINK NA NA A 311 O HOH A 517 1555 1555 2.49 LINK NA NA A 311 O HOH A 547 1555 1555 2.38 LINK NA NA A 311 O HOH A 809 1555 1555 2.33 LINK NA NA A 312 O HOH A 510 1555 1555 2.57 LINK NA NA A 312 O HOH A 569 1555 1555 2.56 LINK NA NA A 312 O HOH A 651 1555 1555 2.49 LINK NA NA A 312 O HOH A 656 1555 1555 2.34 LINK NA NA A 313 O1 CIT A 314 1555 1555 2.34 LINK NA NA A 313 O5 CIT A 314 1555 1555 2.60 LINK NA NA A 313 O7 CIT A 314 1555 1555 2.71 LINK NA NA A 313 O HOH A 687 1555 1555 2.27 LINK NA NA A 313 O HOH A 822 1555 1555 2.53 SITE 1 AC1 6 ASP A 134 ASN A 136 ASP A 138 GLN A 140 SITE 2 AC1 6 GLN A 142 GLU A 205 SITE 1 AC2 6 THR A 110 TYR A 295 HOH A 507 HOH A 517 SITE 2 AC2 6 HOH A 547 HOH A 809 SITE 1 AC3 6 SER A 228 ILE A 230 HOH A 510 HOH A 569 SITE 2 AC3 6 HOH A 651 HOH A 656 SITE 1 AC4 4 ASN A 15 CIT A 314 HOH A 687 HOH A 822 SITE 1 AC5 14 ASN A 15 ASN A 84 HIS A 152 TRP A 183 SITE 2 AC5 14 ASN A 211 ASP A 236 NA A 313 HOH A 543 SITE 3 AC5 14 HOH A 588 HOH A 665 HOH A 705 HOH A 800 SITE 4 AC5 14 HOH A 810 HOH A 836 SITE 1 AC6 10 ASN A 136 LYS A 203 THR A 282 ASN A 283 SITE 2 AC6 10 TRP A 284 HOH A 604 HOH A 612 HOH A 678 SITE 3 AC6 10 HOH A 783 HOH A 823 CRYST1 56.800 70.300 112.100 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017606 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008921 0.00000