PDB Short entry for 2HRG HEADER OXIDOREDUCTASE 20-JUL-06 2HRG TITLE CRYSTAL STRUCTURE OF BLUE LACCASE FROM TRAMETES TROGII COMPLEXED WITH TITLE 2 P-METHYLBENZOATE CAVEAT 2HRG NAG B 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACCASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BLUE LACCASE; COMPND 5 EC: 1.10.3.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FUNALIA TROGII; SOURCE 3 ORGANISM_TAXID: 76130; SOURCE 4 STRAIN: 201 (DSM11919) KEYWDS LACCASE, OXIDOREDUCTASE, LIGNIN DEGRADATION EXPDTA X-RAY DIFFRACTION AUTHOR I.MATERA,A.GULLOTTO,M.FERRARONI,S.TILLI,F.BRIGANTI,A.SCOZZAFAVA REVDAT 7 03-APR-24 2HRG 1 HETSYN LINK REVDAT 6 29-JUL-20 2HRG 1 CAVEAT COMPND REMARK HET REVDAT 6 2 1 HETNAM HETSYN FORMUL LINK REVDAT 6 3 1 SITE ATOM REVDAT 5 19-APR-17 2HRG 1 JRNL REVDAT 4 13-JUL-11 2HRG 1 VERSN REVDAT 3 21-JUL-10 2HRG 1 REMARK REVDAT 2 24-FEB-09 2HRG 1 VERSN REVDAT 1 11-SEP-07 2HRG 0 JRNL AUTH I.MATERA,A.GULLOTTO,S.TILLI,M.FERRARONI,A.SCOZZAFAVA, JRNL AUTH 2 F.BRIGANTI JRNL TITL CRYSTAL STRUCTURE OF THE BLUE MULTICOPPER OXIDASE FROM THE JRNL TITL 2 WHITE-ROT FUNGUS TRAMETES TROGII COMPLEXED WITH P-TOLUATE JRNL REF INORG.CHIM.ACTA. V. 361 4129 2008 JRNL REFN ISSN 0020-1693 JRNL DOI 10.1016/J.ICA.2008.03.091 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 101597 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5334 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7273 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 386 REMARK 3 BIN FREE R VALUE : 0.2390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3755 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 113 REMARK 3 SOLVENT ATOMS : 548 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : 0.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.065 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.065 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.141 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4036 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5544 ; 1.382 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 495 ; 6.151 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;35.774 ;24.368 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 547 ;11.094 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;18.958 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 654 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3104 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1920 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2776 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 492 ; 0.110 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 13 ; 0.145 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 57 ; 0.224 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.161 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2540 ; 0.585 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4078 ; 1.004 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1663 ; 1.504 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1466 ; 2.165 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2HRG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038675. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8423 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 106985 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 85.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: BLUE LACCASE FROM PANUS TIGRINUS (NOT YET REMARK 200 DEPOSITED) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, CALCIUM ACETATE, PEG 400, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.19250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.28050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.56400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.28050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.19250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.56400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C VAL A 463 H MET A 464 1.49 REMARK 500 C4 NAG B 2 C1 BMA B 3 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 16 53.33 -143.44 REMARK 500 LEU A 58 122.66 76.87 REMARK 500 SER A 113 -136.76 47.21 REMARK 500 ASP A 205 -70.54 -155.69 REMARK 500 ALA A 240 -6.94 83.33 REMARK 500 ARG A 267 48.90 -103.91 REMARK 500 ASN A 418 53.48 -154.04 REMARK 500 ARG A 422 -169.03 -161.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1499 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 64 NE2 REMARK 620 2 HIS A 397 NE2 167.1 REMARK 620 3 HOH A3036 O 97.8 95.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1498 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 66 ND1 REMARK 620 2 HIS A 109 NE2 140.6 REMARK 620 3 HIS A 451 NE2 112.5 105.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 103 O REMARK 620 2 SER A 224 O 90.6 REMARK 620 3 HOH A3075 O 68.0 92.0 REMARK 620 4 HOH A3122 O 86.2 82.9 153.7 REMARK 620 5 HOH A3170 O 171.0 96.2 105.7 100.5 REMARK 620 6 HOH A3259 O 96.8 171.8 94.0 94.0 76.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1500 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 111 NE2 REMARK 620 2 HIS A 399 NE2 114.4 REMARK 620 3 HIS A 449 NE2 119.4 122.0 REMARK 620 4 HOH A3160 O 86.7 99.7 103.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 143 OG REMARK 620 2 THR A 188 O 145.6 REMARK 620 3 HOH A3340 O 89.1 80.0 REMARK 620 4 HOH A3396 O 73.6 104.6 155.8 REMARK 620 5 HOH A3533 O 75.6 70.5 61.7 96.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1003 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 183 OD1 REMARK 620 2 HOH A3425 O 69.4 REMARK 620 3 HOH A3429 O 68.5 78.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1497 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 394 ND1 REMARK 620 2 CYS A 450 SG 123.3 REMARK 620 3 HIS A 455 ND1 101.2 135.4 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HRH RELATED DB: PDB DBREF 2HRG A 1 496 UNP Q9HDQ0 Q9HDQ0_9APHY 22 517 SEQRES 1 A 496 ALA ILE GLY PRO VAL ALA ASP LEU THR ILE SER ASN GLY SEQRES 2 A 496 ALA VAL SER PRO ASP GLY PHE SER ARG GLN ALA ILE LEU SEQRES 3 A 496 VAL ASN ASP VAL PHE PRO SER PRO LEU ILE THR GLY ASN SEQRES 4 A 496 LYS GLY ASP ARG PHE GLN LEU ASN VAL ILE ASP ASN MET SEQRES 5 A 496 THR ASN HIS THR MET LEU LYS SER THR SER ILE HIS TRP SEQRES 6 A 496 HIS GLY PHE PHE GLN HIS GLY THR ASN TRP ALA ASP GLY SEQRES 7 A 496 PRO ALA PHE VAL ASN GLN CYS PRO ILE SER THR GLY HIS SEQRES 8 A 496 ALA PHE LEU TYR ASP PHE GLN VAL PRO ASP GLN ALA GLY SEQRES 9 A 496 THR PHE TRP TYR HIS SER HIS LEU SER THR GLN TYR CYS SEQRES 10 A 496 ASP GLY LEU ARG GLY PRO ILE VAL VAL TYR ASP PRO GLN SEQRES 11 A 496 ASP PRO HIS LYS SER LEU TYR ASP VAL ASP ASP ASP SER SEQRES 12 A 496 THR VAL ILE THR LEU ALA ASP TRP TYR HIS LEU ALA ALA SEQRES 13 A 496 LYS VAL GLY SER PRO VAL PRO THR ALA ASP ALA THR LEU SEQRES 14 A 496 ILE ASN GLY LEU GLY ARG SER ILE ASP THR LEU ASN ALA SEQRES 15 A 496 ASP LEU ALA VAL ILE THR VAL THR LYS GLY LYS ARG TYR SEQRES 16 A 496 ARG PHE ARG LEU VAL SER LEU SER CYS ASP PRO ASN HIS SEQRES 17 A 496 VAL PHE SER ILE ASP GLY HIS SER LEU THR VAL ILE GLU SEQRES 18 A 496 ALA ASP SER VAL ASN LEU LYS PRO GLN THR VAL ASP SER SEQRES 19 A 496 ILE GLN ILE PHE ALA ALA GLN ARG TYR SER PHE VAL LEU SEQRES 20 A 496 ASN ALA ASP GLN ASP VAL GLY ASN TYR TRP ILE ARG ALA SEQRES 21 A 496 LEU PRO ASN SER GLY THR ARG ASN PHE ASP GLY GLY VAL SEQRES 22 A 496 ASN SER ALA ILE LEU ARG TYR ASP GLY ALA ALA PRO VAL SEQRES 23 A 496 GLU PRO THR THR SER GLN THR PRO SER THR ASN PRO LEU SEQRES 24 A 496 VAL GLU SER ALA LEU THR THR LEU GLU GLY THR ALA ALA SEQRES 25 A 496 PRO GLY SER PRO ALA PRO GLY GLY VAL ASP LEU ALA LEU SEQRES 26 A 496 ASN MET ALA PHE GLY PHE ALA GLY GLY LYS PHE THR ILE SEQRES 27 A 496 ASN GLY ALA SER PHE THR PRO PRO THR VAL PRO VAL LEU SEQRES 28 A 496 LEU GLN ILE LEU SER GLY ALA GLN SER ALA GLN ASP LEU SEQRES 29 A 496 LEU PRO SER GLY SER VAL TYR SER LEU PRO ALA ASN ALA SEQRES 30 A 496 ASP ILE GLU ILE SER LEU PRO ALA THR ALA ALA ALA PRO SEQRES 31 A 496 GLY PHE PRO HIS PRO PHE HIS LEU HIS GLY HIS THR PHE SEQRES 32 A 496 ALA VAL VAL ARG SER ALA GLY SER SER THR TYR ASN TYR SEQRES 33 A 496 GLU ASN PRO VAL TYR ARG ASP VAL VAL SER THR GLY SER SEQRES 34 A 496 PRO GLY ASP ASN VAL THR ILE ARG PHE ARG THR ASP ASN SEQRES 35 A 496 PRO GLY PRO TRP PHE LEU HIS CYS HIS ILE ASP PHE HIS SEQRES 36 A 496 LEU GLU ALA GLY PHE ALA VAL VAL MET ALA GLU ASP ILE SEQRES 37 A 496 PRO GLU VAL ALA ALA THR ASN PRO VAL PRO GLN ALA TRP SEQRES 38 A 496 SER ASP LEU CYS PRO THR TYR ASP ALA LEU SER PRO ASP SEQRES 39 A 496 ASP GLN MODRES 2HRG ASN A 54 ASN GLYCOSYLATION SITE MODRES 2HRG ASN A 433 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET MAN B 4 11 HET NAG C 1 14 HET NAG C 2 14 HET CA A1001 1 HET CA A1002 1 HET CA A1003 1 HET CU A1497 1 HET CU A1498 1 HET CU A1499 1 HET CU A1500 1 HET GOL A2001 6 HET GOL A2002 6 HET GOL A2003 6 HET 4MA A3001 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETNAM CU COPPER (II) ION HETNAM GOL GLYCEROL HETNAM 4MA 4-METHYLBENZOIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN 4MA P-METHYLBENZOIC ACID FORMUL 2 NAG 4(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 2 MAN C6 H12 O6 FORMUL 4 CA 3(CA 2+) FORMUL 7 CU 4(CU 2+) FORMUL 11 GOL 3(C3 H8 O3) FORMUL 14 4MA C8 H8 O2 FORMUL 15 HOH *548(H2 O) HELIX 1 1 ASN A 54 LEU A 58 5 5 HELIX 2 2 THR A 73 ASP A 77 5 5 HELIX 3 3 THR A 114 GLY A 119 5 6 HELIX 4 4 HIS A 133 TYR A 137 5 5 HELIX 5 5 ASP A 141 SER A 143 5 3 HELIX 6 6 PHE A 269 VAL A 273 5 5 HELIX 7 7 VAL A 300 LEU A 304 5 5 HELIX 8 8 PRO A 349 SER A 356 1 8 HELIX 9 9 SER A 360 LEU A 364 5 5 HELIX 10 10 ILE A 452 ALA A 458 1 7 HELIX 11 11 GLU A 470 ASN A 475 1 6 HELIX 12 12 PRO A 478 ALA A 490 1 13 HELIX 13 13 SER A 492 GLN A 496 5 5 SHEET 1 A 4 ARG A 22 VAL A 27 0 SHEET 2 A 4 VAL A 5 VAL A 15 -1 N SER A 11 O LEU A 26 SHEET 3 A 4 ARG A 43 ASP A 50 1 O ILE A 49 N ILE A 10 SHEET 4 A 4 ALA A 92 GLN A 98 -1 O PHE A 97 N PHE A 44 SHEET 1 B 4 ILE A 36 ASN A 39 0 SHEET 2 B 4 ARG A 121 TYR A 127 1 O TYR A 127 N GLY A 38 SHEET 3 B 4 GLY A 104 SER A 110 -1 N PHE A 106 O ILE A 124 SHEET 4 B 4 ILE A 63 HIS A 66 -1 N HIS A 64 O HIS A 109 SHEET 1 C 6 ALA A 167 ILE A 170 0 SHEET 2 C 6 VAL A 145 TRP A 151 -1 N ALA A 149 O LEU A 169 SHEET 3 C 6 ARG A 194 SER A 201 1 O ARG A 198 N ILE A 146 SHEET 4 C 6 ARG A 242 ASN A 248 -1 O TYR A 243 N LEU A 199 SHEET 5 C 6 LEU A 217 ALA A 222 -1 N ILE A 220 O SER A 244 SHEET 6 C 6 VAL A 225 VAL A 232 -1 O VAL A 232 N LEU A 217 SHEET 1 D 5 VAL A 186 VAL A 189 0 SHEET 2 D 5 SER A 275 TYR A 280 1 O ILE A 277 N ILE A 187 SHEET 3 D 5 ASN A 255 PRO A 262 -1 N TYR A 256 O LEU A 278 SHEET 4 D 5 HIS A 208 ILE A 212 -1 N SER A 211 O ARG A 259 SHEET 5 D 5 ILE A 235 ILE A 237 -1 O ILE A 235 N PHE A 210 SHEET 1 E 5 LEU A 323 ASN A 326 0 SHEET 2 E 5 ASP A 378 PRO A 384 1 O GLU A 380 N LEU A 325 SHEET 3 E 5 ASN A 433 ARG A 439 -1 O VAL A 434 N LEU A 383 SHEET 4 E 5 PHE A 403 ARG A 407 -1 N ALA A 404 O ARG A 437 SHEET 5 E 5 TYR A 421 ARG A 422 -1 O ARG A 422 N PHE A 403 SHEET 1 F 2 PHE A 329 ALA A 332 0 SHEET 2 F 2 LYS A 335 ILE A 338 -1 O LYS A 335 N ALA A 332 SHEET 1 G 5 VAL A 370 LEU A 373 0 SHEET 2 G 5 ALA A 461 GLU A 466 1 O ALA A 465 N TYR A 371 SHEET 3 G 5 GLY A 444 CYS A 450 -1 N TRP A 446 O MET A 464 SHEET 4 G 5 PRO A 395 LEU A 398 -1 N HIS A 397 O HIS A 449 SHEET 5 G 5 VAL A 424 SER A 426 -1 O VAL A 425 N PHE A 396 SSBOND 1 CYS A 85 CYS A 485 1555 1555 2.09 SSBOND 2 CYS A 117 CYS A 204 1555 1555 2.05 LINK ND2 ASN A 54 C1 NAG B 1 1555 1555 1.52 LINK ND2 ASN A 433 C1 NAG C 1 1555 1555 1.65 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.42 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.35 LINK O6 BMA B 3 C1 MAN B 4 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK NE2 HIS A 64 CU CU A1499 1555 1555 1.87 LINK ND1 HIS A 66 CU CU A1498 1555 1555 1.94 LINK O ALA A 103 CA CA A1002 1555 1555 2.27 LINK NE2 HIS A 109 CU CU A1498 1555 1555 2.03 LINK NE2 HIS A 111 CU CU A1500 1555 1555 2.07 LINK OG SER A 143 CA CA A1001 1555 1555 3.20 LINK OD1 ASP A 183 CA CA A1003 1555 1555 2.50 LINK O THR A 188 CA CA A1001 1555 1555 2.70 LINK O SER A 224 CA CA A1002 1555 1555 2.24 LINK ND1 HIS A 394 CU CU A1497 1555 1555 2.06 LINK NE2 HIS A 397 CU CU A1499 1555 1555 1.80 LINK NE2 HIS A 399 CU CU A1500 1555 1555 2.01 LINK NE2 HIS A 449 CU CU A1500 1555 1555 1.97 LINK SG CYS A 450 CU CU A1497 1555 1555 2.15 LINK NE2 HIS A 451 CU CU A1498 1555 1555 2.19 LINK ND1 HIS A 455 CU CU A1497 1555 1555 2.03 LINK CA CA A1001 O HOH A3340 1555 1555 2.91 LINK CA CA A1001 O HOH A3396 1555 1555 2.25 LINK CA CA A1001 O HOH A3533 1555 1555 2.31 LINK CA CA A1002 O HOH A3075 1555 1555 2.83 LINK CA CA A1002 O HOH A3122 1555 1555 2.17 LINK CA CA A1002 O HOH A3170 1555 1555 2.68 LINK CA CA A1002 O HOH A3259 1555 1555 2.31 LINK CA CA A1003 O HOH A3425 1555 1555 2.31 LINK CA CA A1003 O HOH A3429 1555 1555 2.76 LINK CU CU A1499 O HOH A3036 1555 1555 2.57 LINK CU CU A1500 O HOH A3160 1555 1555 2.23 CISPEP 1 GLY A 3 PRO A 4 0 5.43 CISPEP 2 PHE A 31 PRO A 32 0 -0.98 CISPEP 3 LEU A 365 PRO A 366 0 3.45 CISPEP 4 PHE A 392 PRO A 393 0 3.12 CRYST1 84.385 85.128 108.561 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011850 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011747 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009211 0.00000