PDB Short entry for 2I0O HEADER HYDROLASE 10-AUG-06 2I0O TITLE CRYSTAL STRUCTURE OF ANOPHELES GAMBIAE SER/THR PHOSPHATASE COMPLEXED TITLE 2 WITH ZN2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: SER/THR PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANOPHELES GAMBIAE; SOURCE 3 ORGANISM_COMMON: AFRICAN MALARIA MOSQUITO; SOURCE 4 ORGANISM_TAXID: 7165; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSGX4 KEYWDS PHOSPHATASE, BETA SANDWICH, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, NYSGXRC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.JIN,J.M.SAUDER,S.K.BURLEY,L.SHAPIRO,NEW YORK SGX RESEARCH CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 7 21-FEB-24 2I0O 1 REMARK REVDAT 6 03-FEB-21 2I0O 1 AUTHOR JRNL REMARK SEQADV REVDAT 6 2 1 LINK REVDAT 5 14-NOV-18 2I0O 1 AUTHOR REVDAT 4 16-AUG-17 2I0O 1 SOURCE REVDAT 3 13-JUL-11 2I0O 1 VERSN REVDAT 2 25-MAR-08 2I0O 1 VERSN REVDAT 1 24-OCT-06 2I0O 0 JRNL AUTH S.C.ALMO,J.B.BONANNO,J.M.SAUDER,S.EMTAGE,T.P.DILORENZO, JRNL AUTH 2 V.MALASHKEVICH,S.R.WASSERMAN,S.SWAMINATHAN,S.ESWARAMOORTHY, JRNL AUTH 3 R.AGARWAL,D.KUMARAN,M.MADEGOWDA,S.RAGUMANI,Y.PATSKOVSKY, JRNL AUTH 4 J.ALVARADO,U.A.RAMAGOPAL,J.FABER-BARATA,M.R.CHANCE,A.SALI, JRNL AUTH 5 A.FISER,Z.Y.ZHANG,D.S.LAWRENCE,S.K.BURLEY JRNL TITL STRUCTURAL GENOMICS OF PROTEIN PHOSPHATASES. JRNL REF J.STRUCT.FUNCT.GENOM. V. 8 121 2007 JRNL REFN ISSN 1345-711X JRNL PMID 18058037 JRNL DOI 10.1007/S10969-007-9036-1 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 30817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1644 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2273 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2213 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 385 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.28000 REMARK 3 B22 (A**2) : 2.24000 REMARK 3 B33 (A**2) : -0.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.079 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.098 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2351 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3165 ; 1.810 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 310 ; 6.888 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;32.089 ;25.636 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 432 ;16.754 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;11.908 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 349 ; 0.139 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1773 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1167 ; 0.232 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1573 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 292 ; 0.211 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.096 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 72 ; 0.259 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 33 ; 0.339 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1522 ; 1.091 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2349 ; 1.655 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 942 ; 2.900 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 803 ; 3.981 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 440 REMARK 3 ORIGIN FOR THE GROUP (A): -25.5229 -16.7736 14.5720 REMARK 3 T TENSOR REMARK 3 T11: -.0491 T22: -.0342 REMARK 3 T33: -.0415 T12: .0196 REMARK 3 T13: -.0190 T23: .0013 REMARK 3 L TENSOR REMARK 3 L11: 1.2759 L22: .9235 REMARK 3 L33: 2.4291 L12: .1591 REMARK 3 L13: .0894 L23: .9901 REMARK 3 S TENSOR REMARK 3 S11: .0282 S12: -.0136 S13: .0155 REMARK 3 S21: -.1217 S22: -.0732 S23: .1060 REMARK 3 S31: -.1436 S32: -.1754 S33: .0450 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 441 A 499 REMARK 3 ORIGIN FOR THE GROUP (A): -5.7749 -17.5272 19.0328 REMARK 3 T TENSOR REMARK 3 T11: -.0349 T22: -.0213 REMARK 3 T33: -.0386 T12: -.0048 REMARK 3 T13: -.0005 T23: -.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.7590 L22: .9191 REMARK 3 L33: 3.6221 L12: .1347 REMARK 3 L13: .7603 L23: .0020 REMARK 3 S TENSOR REMARK 3 S11: .0283 S12: .2219 S13: -.1708 REMARK 3 S21: -.0670 S22: -.0422 S23: -.0157 REMARK 3 S31: .1011 S32: .1809 S33: .0139 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 500 A 578 REMARK 3 ORIGIN FOR THE GROUP (A): -25.6222 -29.6493 2.7703 REMARK 3 T TENSOR REMARK 3 T11: .0322 T22: .0265 REMARK 3 T33: -.0090 T12: -.0253 REMARK 3 T13: -.0168 T23: -.0402 REMARK 3 L TENSOR REMARK 3 L11: 1.9410 L22: 1.3276 REMARK 3 L33: 2.6532 L12: .1552 REMARK 3 L13: -.1026 L23: .0698 REMARK 3 S TENSOR REMARK 3 S11: -.0740 S12: .1754 S13: -.2441 REMARK 3 S21: -.0558 S22: .0050 S23: .1180 REMARK 3 S31: .3278 S32: -.1590 S33: .0690 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2I0O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000038989. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97886 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32568 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG MME 550, 0.01M ZINC CHLORIDE, REMARK 280 0.1M MES, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.13950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.13950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.05450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.28600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.05450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.28600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.13950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.05450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.28600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.13950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.05450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.28600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -462.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -64.10900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 54.13950 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 583 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 117 REMARK 465 SER A 118 REMARK 465 ALA A 119 REMARK 465 GLY A 120 REMARK 465 SER A 121 REMARK 465 ALA A 557 REMARK 465 PRO A 558 REMARK 465 HIS A 559 REMARK 465 THR A 560 REMARK 465 ARG A 561 REMARK 465 GLY A 562 REMARK 465 ASP A 563 REMARK 465 GLY A 564 REMARK 465 THR A 565 REMARK 465 GLY A 566 REMARK 465 CYS A 567 REMARK 465 ASP A 568 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 556 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 442 O HOH A 712 1.68 REMARK 500 O HOH A 923 O HOH A 958 1.86 REMARK 500 OD2 ASP A 500 O HOH A 958 2.04 REMARK 500 O HOH A 856 O HOH A 910 2.05 REMARK 500 O MET A 439 CE2 PHE A 441 2.08 REMARK 500 O HOH A 728 O HOH A 730 2.09 REMARK 500 OE2 GLU A 37 OD1 ASP A 57 2.13 REMARK 500 OE2 GLU A 37 O HOH A 950 2.16 REMARK 500 O HOH A 889 O HOH A 931 2.18 REMARK 500 OE2 GLU A 535 O HOH A 957 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 0 OE2 GLU A 509 4545 1.74 REMARK 500 O HOH A 909 O HOH A 909 4545 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 37 CD GLU A 37 OE2 0.127 REMARK 500 GLU A 535 CB GLU A 535 CG 0.257 REMARK 500 GLU A 535 CG GLU A 535 CD 0.191 REMARK 500 GLU A 535 CD GLU A 535 OE1 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 57 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 460 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 LEU A 473 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 GLU A 535 OE1 - CD - OE2 ANGL. DEV. = -7.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 19 -159.40 -126.17 REMARK 500 ASN A 45 55.16 -100.34 REMARK 500 ASN A 45 57.81 -102.10 REMARK 500 ARG A 536 -31.45 -135.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 440 PHE A 441 31.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 580 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 37 OE2 REMARK 620 2 ASP A 57 OD2 96.3 REMARK 620 3 ASP A 518 OD1 169.2 91.2 REMARK 620 4 HOH A 919 O 61.0 113.1 108.8 REMARK 620 5 HOH A 950 O 64.2 131.2 116.0 96.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 581 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 38 OD2 REMARK 620 2 CYS A 517 SG 110.1 REMARK 620 3 ASN A 569 O 95.4 108.5 REMARK 620 4 HOH A 919 O 125.7 123.8 74.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 584 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 40 NE2 REMARK 620 2 HOH A 593 O 69.1 REMARK 620 3 HOH A 911 O 99.9 107.6 REMARK 620 4 HOH A 928 O 97.7 85.2 161.1 REMARK 620 5 HOH A 940 O 94.7 162.3 81.5 90.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 579 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 59 NE2 REMARK 620 2 ASP A 425 OD2 118.0 REMARK 620 3 ASP A 518 OD2 94.0 110.7 REMARK 620 4 HOH A 932 O 111.5 107.0 115.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 583 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 71 NE2 REMARK 620 2 HIS A 71 NE2 118.7 REMARK 620 3 GLU A 110 OE2 112.6 99.5 REMARK 620 4 GLU A 110 OE1 83.6 83.8 158.4 REMARK 620 5 GLU A 110 OE2 109.2 108.2 107.9 51.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 582 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 452 OE1 REMARK 620 2 GLU A 455 OE1 102.8 REMARK 620 3 GLU A 509 OE1 102.2 97.4 REMARK 620 4 HOH A 767 O 79.6 86.0 175.7 REMARK 620 5 HOH A 910 O 134.7 117.5 92.8 83.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 579 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 580 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 581 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 582 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 583 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 584 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-8886Z RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 125-399 HAVE BEEN DELETED FROM THE SEQUENCE DBREF 2I0O A 2 124 UNP Q7PP01 Q7PP01_ANOGA 2 124 DBREF 2I0O A 400 578 UNP Q7PP01 Q7PP01_ANOGA 400 578 SEQADV 2I0O SER A 0 UNP Q7PP01 CLONING ARTIFACT SEQADV 2I0O LEU A 1 UNP Q7PP01 CLONING ARTIFACT SEQRES 1 A 304 SER LEU GLY ALA TYR LEU SER GLU PRO LEU THR THR LYS SEQRES 2 A 304 ASP SER SER ASP GLU SER ASN GLU PHE LEU ALA SER GLY SEQRES 3 A 304 SER SER SER MET GLN GLY TRP ARG ILE SER GLN GLU ASP SEQRES 4 A 304 ALA HIS ASN CYS ILE LEU ASN PHE ASP ASP GLN CYS SER SEQRES 5 A 304 PHE PHE ALA VAL TYR ASP GLY HIS GLY GLY ALA GLU VAL SEQRES 6 A 304 ALA GLN TYR CYS SER LEU HIS LEU PRO THR PHE LEU LYS SEQRES 7 A 304 THR VAL GLU ALA TYR GLY ARG LYS GLU PHE GLU LYS ALA SEQRES 8 A 304 LEU LYS GLU ALA PHE LEU GLY PHE ASP ALA THR LEU LEU SEQRES 9 A 304 GLN GLU LYS VAL ILE GLU GLU LEU LYS VAL LEU SER GLY SEQRES 10 A 304 ASP SER ALA GLY SER ASP ALA GLU PRO GLY LYS ASP SER SEQRES 11 A 304 GLY CYS THR ALA VAL VAL ALA LEU LEU HIS GLY LYS ASP SEQRES 12 A 304 LEU TYR VAL ALA ASN ALA GLY ASP SER ARG CYS VAL VAL SEQRES 13 A 304 CYS ARG ASN GLY LYS ALA LEU GLU MET SER PHE ASP HIS SEQRES 14 A 304 LYS PRO GLU ASP THR VAL GLU TYR GLN ARG ILE GLU LYS SEQRES 15 A 304 ALA GLY GLY ARG VAL THR LEU ASP GLY ARG VAL ASN GLY SEQRES 16 A 304 GLY LEU ASN LEU SER ARG ALA ILE GLY ASP HIS GLY TYR SEQRES 17 A 304 LYS MET ASN LYS SER LEU PRO ALA GLU GLU GLN MET ILE SEQRES 18 A 304 SER ALA LEU PRO ASP ILE GLU LYS ILE THR VAL GLY PRO SEQRES 19 A 304 GLU ASP GLU PHE MET VAL LEU ALA CYS ASP GLY ILE TRP SEQRES 20 A 304 ASN PHE MET THR SER GLU GLN VAL VAL GLN PHE VAL GLN SEQRES 21 A 304 GLU ARG ILE ASN LYS PRO GLY MET LYS LEU SER LYS ILE SEQRES 22 A 304 CYS GLU GLU LEU PHE ASP HIS CYS LEU ALA PRO HIS THR SEQRES 23 A 304 ARG GLY ASP GLY THR GLY CYS ASP ASN MET THR ALA ILE SEQRES 24 A 304 ILE VAL GLN PHE LYS HET ZN A 579 1 HET ZN A 580 1 HET ZN A 581 1 HET ZN A 582 1 HET ZN A 583 1 HET ZN A 584 1 HETNAM ZN ZINC ION FORMUL 2 ZN 6(ZN 2+) FORMUL 8 HOH *385(H2 O) HELIX 1 1 LEU A 1 LEU A 5 5 5 HELIX 2 2 ALA A 62 VAL A 79 1 18 HELIX 3 3 VAL A 79 ARG A 84 1 6 HELIX 4 4 GLU A 86 LEU A 102 1 17 HELIX 5 6 ASP A 447 ALA A 457 1 11 HELIX 6 7 ARG A 466 GLY A 470 5 5 HELIX 7 8 HIS A 480 LYS A 483 5 4 HELIX 8 9 PRO A 489 GLN A 493 5 5 HELIX 9 10 CYS A 517 ASN A 522 1 6 HELIX 10 11 THR A 525 ASN A 538 1 14 HELIX 11 12 LYS A 543 LEU A 556 1 14 SHEET 1 A 6 THR A 10 SER A 18 0 SHEET 2 A 6 LEU A 22 GLY A 31 -1 O SER A 24 N GLU A 17 SHEET 3 A 6 MET A 570 PHE A 577 -1 O ILE A 574 N GLY A 25 SHEET 4 A 6 ASP A 510 ALA A 516 -1 N LEU A 515 O ILE A 573 SHEET 5 A 6 ARG A 427 ARG A 432 -1 N CYS A 431 O PHE A 512 SHEET 6 A 6 LYS A 435 GLU A 438 -1 O LEU A 437 N VAL A 430 SHEET 1 B 4 ASP A 38 ASP A 47 0 SHEET 2 B 4 CYS A 50 ASP A 57 -1 O PHE A 52 N ILE A 43 SHEET 3 B 4 GLY A 405 HIS A 414 -1 O ALA A 411 N PHE A 53 SHEET 4 B 4 ILE A 477 GLY A 478 -1 O ILE A 477 N CYS A 406 SHEET 1 C 5 ASP A 38 ASP A 47 0 SHEET 2 C 5 CYS A 50 ASP A 57 -1 O PHE A 52 N ILE A 43 SHEET 3 C 5 GLY A 405 HIS A 414 -1 O ALA A 411 N PHE A 53 SHEET 4 C 5 ASP A 417 ALA A 423 -1 O TYR A 419 N LEU A 412 SHEET 5 C 5 ASP A 500 THR A 505 -1 O GLU A 502 N VAL A 420 LINK OE2 GLU A 37 ZN ZN A 580 1555 1555 1.91 LINK OD2 ASP A 38 ZN ZN A 581 1555 1555 1.95 LINK NE2 HIS A 40 ZN ZN A 584 1555 1555 2.19 LINK OD2 ASP A 57 ZN ZN A 580 1555 1555 1.98 LINK NE2 HIS A 59 ZN ZN A 579 1555 1555 2.01 LINK NE2 HIS A 71 ZN ZN A 583 1555 1555 1.95 LINK NE2 HIS A 71 ZN ZN A 583 3455 1555 2.14 LINK OE2 GLU A 110 ZN ZN A 583 1555 1555 2.05 LINK OE1 GLU A 110 ZN ZN A 583 3455 1555 2.77 LINK OE2 GLU A 110 ZN ZN A 583 3455 1555 1.97 LINK OD2 ASP A 425 ZN ZN A 579 1555 1555 1.96 LINK OE1 GLN A 452 ZN ZN A 582 1555 1555 1.96 LINK OE1 GLU A 455 ZN ZN A 582 1555 1555 1.99 LINK OE1 GLU A 509 ZN ZN A 582 8545 1555 2.21 LINK SG CYS A 517 ZN ZN A 581 1555 1555 2.37 LINK OD2 ASP A 518 ZN ZN A 579 1555 1555 2.01 LINK OD1 ASP A 518 ZN ZN A 580 1555 1555 2.19 LINK O ASN A 569 ZN ZN A 581 1555 1555 2.02 LINK ZN ZN A 579 O HOH A 932 1555 1555 2.16 LINK ZN ZN A 580 O HOH A 919 1555 1555 2.49 LINK ZN ZN A 580 O HOH A 950 1555 1555 2.13 LINK ZN ZN A 581 O HOH A 919 1555 1555 2.22 LINK ZN ZN A 582 O HOH A 767 1555 1555 2.45 LINK ZN ZN A 582 O HOH A 910 1555 5555 2.31 LINK ZN ZN A 584 O HOH A 593 1555 1555 2.34 LINK ZN ZN A 584 O HOH A 911 1555 1555 2.22 LINK ZN ZN A 584 O HOH A 928 1555 1555 2.06 LINK ZN ZN A 584 O HOH A 940 1555 1555 2.53 SITE 1 AC1 4 HIS A 59 ASP A 425 ASP A 518 HOH A 932 SITE 1 AC2 6 GLU A 37 ASP A 57 ASP A 518 ZN A 581 SITE 2 AC2 6 HOH A 919 HOH A 950 SITE 1 AC3 5 ASP A 38 CYS A 517 ASN A 569 ZN A 580 SITE 2 AC3 5 HOH A 919 SITE 1 AC4 6 SER A 0 GLN A 452 GLU A 455 GLU A 509 SITE 2 AC4 6 HOH A 767 HOH A 910 SITE 1 AC5 2 HIS A 71 GLU A 110 SITE 1 AC6 5 HIS A 40 HOH A 593 HOH A 911 HOH A 928 SITE 2 AC6 5 HOH A 940 CRYST1 64.109 84.572 108.279 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015598 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011824 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009235 0.00000