PDB Short entry for 2I62 HEADER TRANSFERASE 27-AUG-06 2I62 TITLE MOUSE NICOTINAMIDE N-METHYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICOTINAMIDE N-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 2.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: NNMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NICOTINAMIDE N-METHYLTRANSFERASE, STRUCTURAL GENOMICS, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.MIN,H.WU,H.ZENG,P.LOPPNAU,J.WEIGELT,M.SUNDSTROM,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,A.BOCHKAREV,A.N.PLOTNIKOV,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (SGC) REVDAT 5 21-FEB-24 2I62 1 REMARK SEQADV REVDAT 4 18-OCT-17 2I62 1 REMARK REVDAT 3 24-FEB-09 2I62 1 VERSN REVDAT 2 20-SEP-06 2I62 1 AUTHOR REVDAT 1 12-SEP-06 2I62 0 JRNL AUTH H.WU,J.MIN,H.ZENG,P.LOPPNAU,J.WEIGELT,M.SUNDSTROM, JRNL AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,A.BOCHKAREV,A.N.PLOTNIKOV JRNL TITL THE CRYSTAL STRUCTURE OF MOUSE NICOTINAMIDE JRNL TITL 2 N-METHYLTRANSFERASE IN COMPLEX WITH SAH JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 85746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4535 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6069 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 316 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8150 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 958 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : -0.91000 REMARK 3 B33 (A**2) : 1.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.152 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.108 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.475 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8463 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11470 ; 1.457 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1035 ; 6.217 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 363 ;31.770 ;24.353 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1461 ;14.321 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;18.077 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1267 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6341 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4172 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5772 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 809 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 108 ; 0.176 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 70 ; 0.183 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5322 ; 0.905 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8339 ; 1.452 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3622 ; 2.218 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3131 ; 3.398 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2I62 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-06. REMARK 100 THE DEPOSITION ID IS D_1000039182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MACSCIENCE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85746 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.7 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : 0.06800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 79.25950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 MET A 2 REMARK 465 GLU A 3 REMARK 465 SER A 4 REMARK 465 GLY A 5 REMARK 465 ARG A 263 REMARK 465 SER A 264 REMARK 465 GLU A 265 REMARK 465 GLY B 1 REMARK 465 MET B 2 REMARK 465 GLU B 3 REMARK 465 SER B 4 REMARK 465 GLY C 1 REMARK 465 MET C 2 REMARK 465 GLU C 3 REMARK 465 SER C 4 REMARK 465 ARG C 263 REMARK 465 SER C 264 REMARK 465 GLU C 265 REMARK 465 GLY D 1 REMARK 465 MET D 2 REMARK 465 GLU D 3 REMARK 465 SER D 4 REMARK 465 GLY D 5 REMARK 465 GLU D 265 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TRP C 93 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 93 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 253 CA - CB - CG ANGL. DEV. = 17.1 DEGREES REMARK 500 LEU D 253 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 32 30.46 71.54 REMARK 500 ASN C 121 96.71 2.43 REMARK 500 ARG C 122 -120.24 66.49 REMARK 500 SER C 240 33.94 -91.29 REMARK 500 ASN D 249 32.09 -96.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 4001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH B 4002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH C 4003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH D 4004 DBREF 2I62 A 2 265 UNP O55239 NNMT_MOUSE 1 264 DBREF 2I62 B 2 265 UNP O55239 NNMT_MOUSE 1 264 DBREF 2I62 C 2 265 UNP O55239 NNMT_MOUSE 1 264 DBREF 2I62 D 2 265 UNP O55239 NNMT_MOUSE 1 264 SEQADV 2I62 GLY A 1 UNP O55239 CLONING ARTIFACT SEQADV 2I62 GLY B 1 UNP O55239 CLONING ARTIFACT SEQADV 2I62 GLY C 1 UNP O55239 CLONING ARTIFACT SEQADV 2I62 GLY D 1 UNP O55239 CLONING ARTIFACT SEQRES 1 A 265 GLY MET GLU SER GLY PHE THR SER LYS ASP THR TYR LEU SEQRES 2 A 265 SER HIS PHE ASN PRO ARG ASP TYR LEU GLU LYS TYR TYR SEQRES 3 A 265 SER PHE GLY SER ARG HIS CYS ALA GLU ASN GLU ILE LEU SEQRES 4 A 265 ARG HIS LEU LEU LYS ASN LEU PHE LYS ILE PHE CYS LEU SEQRES 5 A 265 GLY ALA VAL LYS GLY GLU LEU LEU ILE ASP ILE GLY SER SEQRES 6 A 265 GLY PRO THR ILE TYR GLN LEU LEU SER ALA CYS GLU SER SEQRES 7 A 265 PHE THR GLU ILE ILE VAL SER ASP TYR THR ASP GLN ASN SEQRES 8 A 265 LEU TRP GLU LEU GLN LYS TRP LEU LYS LYS GLU PRO GLY SEQRES 9 A 265 ALA PHE ASP TRP SER PRO VAL VAL THR TYR VAL CYS ASP SEQRES 10 A 265 LEU GLU GLY ASN ARG MET LYS GLY PRO GLU LYS GLU GLU SEQRES 11 A 265 LYS LEU ARG ARG ALA ILE LYS GLN VAL LEU LYS CYS ASP SEQRES 12 A 265 VAL THR GLN SER GLN PRO LEU GLY GLY VAL SER LEU PRO SEQRES 13 A 265 PRO ALA ASP CYS LEU LEU SER THR LEU CYS LEU ASP ALA SEQRES 14 A 265 ALA CYS PRO ASP LEU PRO ALA TYR ARG THR ALA LEU ARG SEQRES 15 A 265 ASN LEU GLY SER LEU LEU LYS PRO GLY GLY PHE LEU VAL SEQRES 16 A 265 MET VAL ASP ALA LEU LYS SER SER TYR TYR MET ILE GLY SEQRES 17 A 265 GLU GLN LYS PHE SER SER LEU PRO LEU GLY TRP GLU THR SEQRES 18 A 265 VAL ARG ASP ALA VAL GLU GLU ALA GLY TYR THR ILE GLU SEQRES 19 A 265 GLN PHE GLU VAL ILE SER GLN ASN TYR SER SER THR THR SEQRES 20 A 265 SER ASN ASN GLU GLY LEU PHE SER LEU VAL GLY ARG LYS SEQRES 21 A 265 PRO GLY ARG SER GLU SEQRES 1 B 265 GLY MET GLU SER GLY PHE THR SER LYS ASP THR TYR LEU SEQRES 2 B 265 SER HIS PHE ASN PRO ARG ASP TYR LEU GLU LYS TYR TYR SEQRES 3 B 265 SER PHE GLY SER ARG HIS CYS ALA GLU ASN GLU ILE LEU SEQRES 4 B 265 ARG HIS LEU LEU LYS ASN LEU PHE LYS ILE PHE CYS LEU SEQRES 5 B 265 GLY ALA VAL LYS GLY GLU LEU LEU ILE ASP ILE GLY SER SEQRES 6 B 265 GLY PRO THR ILE TYR GLN LEU LEU SER ALA CYS GLU SER SEQRES 7 B 265 PHE THR GLU ILE ILE VAL SER ASP TYR THR ASP GLN ASN SEQRES 8 B 265 LEU TRP GLU LEU GLN LYS TRP LEU LYS LYS GLU PRO GLY SEQRES 9 B 265 ALA PHE ASP TRP SER PRO VAL VAL THR TYR VAL CYS ASP SEQRES 10 B 265 LEU GLU GLY ASN ARG MET LYS GLY PRO GLU LYS GLU GLU SEQRES 11 B 265 LYS LEU ARG ARG ALA ILE LYS GLN VAL LEU LYS CYS ASP SEQRES 12 B 265 VAL THR GLN SER GLN PRO LEU GLY GLY VAL SER LEU PRO SEQRES 13 B 265 PRO ALA ASP CYS LEU LEU SER THR LEU CYS LEU ASP ALA SEQRES 14 B 265 ALA CYS PRO ASP LEU PRO ALA TYR ARG THR ALA LEU ARG SEQRES 15 B 265 ASN LEU GLY SER LEU LEU LYS PRO GLY GLY PHE LEU VAL SEQRES 16 B 265 MET VAL ASP ALA LEU LYS SER SER TYR TYR MET ILE GLY SEQRES 17 B 265 GLU GLN LYS PHE SER SER LEU PRO LEU GLY TRP GLU THR SEQRES 18 B 265 VAL ARG ASP ALA VAL GLU GLU ALA GLY TYR THR ILE GLU SEQRES 19 B 265 GLN PHE GLU VAL ILE SER GLN ASN TYR SER SER THR THR SEQRES 20 B 265 SER ASN ASN GLU GLY LEU PHE SER LEU VAL GLY ARG LYS SEQRES 21 B 265 PRO GLY ARG SER GLU SEQRES 1 C 265 GLY MET GLU SER GLY PHE THR SER LYS ASP THR TYR LEU SEQRES 2 C 265 SER HIS PHE ASN PRO ARG ASP TYR LEU GLU LYS TYR TYR SEQRES 3 C 265 SER PHE GLY SER ARG HIS CYS ALA GLU ASN GLU ILE LEU SEQRES 4 C 265 ARG HIS LEU LEU LYS ASN LEU PHE LYS ILE PHE CYS LEU SEQRES 5 C 265 GLY ALA VAL LYS GLY GLU LEU LEU ILE ASP ILE GLY SER SEQRES 6 C 265 GLY PRO THR ILE TYR GLN LEU LEU SER ALA CYS GLU SER SEQRES 7 C 265 PHE THR GLU ILE ILE VAL SER ASP TYR THR ASP GLN ASN SEQRES 8 C 265 LEU TRP GLU LEU GLN LYS TRP LEU LYS LYS GLU PRO GLY SEQRES 9 C 265 ALA PHE ASP TRP SER PRO VAL VAL THR TYR VAL CYS ASP SEQRES 10 C 265 LEU GLU GLY ASN ARG MET LYS GLY PRO GLU LYS GLU GLU SEQRES 11 C 265 LYS LEU ARG ARG ALA ILE LYS GLN VAL LEU LYS CYS ASP SEQRES 12 C 265 VAL THR GLN SER GLN PRO LEU GLY GLY VAL SER LEU PRO SEQRES 13 C 265 PRO ALA ASP CYS LEU LEU SER THR LEU CYS LEU ASP ALA SEQRES 14 C 265 ALA CYS PRO ASP LEU PRO ALA TYR ARG THR ALA LEU ARG SEQRES 15 C 265 ASN LEU GLY SER LEU LEU LYS PRO GLY GLY PHE LEU VAL SEQRES 16 C 265 MET VAL ASP ALA LEU LYS SER SER TYR TYR MET ILE GLY SEQRES 17 C 265 GLU GLN LYS PHE SER SER LEU PRO LEU GLY TRP GLU THR SEQRES 18 C 265 VAL ARG ASP ALA VAL GLU GLU ALA GLY TYR THR ILE GLU SEQRES 19 C 265 GLN PHE GLU VAL ILE SER GLN ASN TYR SER SER THR THR SEQRES 20 C 265 SER ASN ASN GLU GLY LEU PHE SER LEU VAL GLY ARG LYS SEQRES 21 C 265 PRO GLY ARG SER GLU SEQRES 1 D 265 GLY MET GLU SER GLY PHE THR SER LYS ASP THR TYR LEU SEQRES 2 D 265 SER HIS PHE ASN PRO ARG ASP TYR LEU GLU LYS TYR TYR SEQRES 3 D 265 SER PHE GLY SER ARG HIS CYS ALA GLU ASN GLU ILE LEU SEQRES 4 D 265 ARG HIS LEU LEU LYS ASN LEU PHE LYS ILE PHE CYS LEU SEQRES 5 D 265 GLY ALA VAL LYS GLY GLU LEU LEU ILE ASP ILE GLY SER SEQRES 6 D 265 GLY PRO THR ILE TYR GLN LEU LEU SER ALA CYS GLU SER SEQRES 7 D 265 PHE THR GLU ILE ILE VAL SER ASP TYR THR ASP GLN ASN SEQRES 8 D 265 LEU TRP GLU LEU GLN LYS TRP LEU LYS LYS GLU PRO GLY SEQRES 9 D 265 ALA PHE ASP TRP SER PRO VAL VAL THR TYR VAL CYS ASP SEQRES 10 D 265 LEU GLU GLY ASN ARG MET LYS GLY PRO GLU LYS GLU GLU SEQRES 11 D 265 LYS LEU ARG ARG ALA ILE LYS GLN VAL LEU LYS CYS ASP SEQRES 12 D 265 VAL THR GLN SER GLN PRO LEU GLY GLY VAL SER LEU PRO SEQRES 13 D 265 PRO ALA ASP CYS LEU LEU SER THR LEU CYS LEU ASP ALA SEQRES 14 D 265 ALA CYS PRO ASP LEU PRO ALA TYR ARG THR ALA LEU ARG SEQRES 15 D 265 ASN LEU GLY SER LEU LEU LYS PRO GLY GLY PHE LEU VAL SEQRES 16 D 265 MET VAL ASP ALA LEU LYS SER SER TYR TYR MET ILE GLY SEQRES 17 D 265 GLU GLN LYS PHE SER SER LEU PRO LEU GLY TRP GLU THR SEQRES 18 D 265 VAL ARG ASP ALA VAL GLU GLU ALA GLY TYR THR ILE GLU SEQRES 19 D 265 GLN PHE GLU VAL ILE SER GLN ASN TYR SER SER THR THR SEQRES 20 D 265 SER ASN ASN GLU GLY LEU PHE SER LEU VAL GLY ARG LYS SEQRES 21 D 265 PRO GLY ARG SER GLU HET SAH A4001 26 HET SAH B4002 26 HET SAH C4003 26 HET SAH D4004 26 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 5 SAH 4(C14 H20 N6 O5 S) FORMUL 9 HOH *958(H2 O) HELIX 1 1 SER A 8 PHE A 16 1 9 HELIX 2 2 ASN A 17 SER A 27 1 11 HELIX 3 3 HIS A 32 LEU A 52 1 21 HELIX 4 4 ILE A 69 LEU A 73 5 5 HELIX 5 5 SER A 74 GLU A 77 5 4 HELIX 6 6 THR A 88 LYS A 100 1 13 HELIX 7 7 TRP A 108 GLU A 119 1 12 HELIX 8 8 LYS A 124 ALA A 135 1 12 HELIX 9 9 CYS A 166 CYS A 171 1 6 HELIX 10 10 ASP A 173 SER A 186 1 14 HELIX 11 11 GLY A 218 ALA A 229 1 12 HELIX 12 12 SER B 8 PHE B 16 1 9 HELIX 13 13 ASN B 17 SER B 27 1 11 HELIX 14 14 HIS B 32 LEU B 52 1 21 HELIX 15 15 ILE B 69 LEU B 73 5 5 HELIX 16 16 SER B 74 GLU B 77 5 4 HELIX 17 17 THR B 88 LYS B 100 1 13 HELIX 18 18 TRP B 108 GLU B 119 1 12 HELIX 19 19 LYS B 124 ALA B 135 1 12 HELIX 20 20 CYS B 166 CYS B 171 1 6 HELIX 21 21 ASP B 173 SER B 186 1 14 HELIX 22 22 GLY B 218 ALA B 229 1 12 HELIX 23 23 SER C 8 PHE C 16 1 9 HELIX 24 24 ASN C 17 SER C 27 1 11 HELIX 25 25 HIS C 32 LEU C 52 1 21 HELIX 26 26 ILE C 69 LEU C 73 5 5 HELIX 27 27 SER C 74 GLU C 77 5 4 HELIX 28 28 THR C 88 LYS C 100 1 13 HELIX 29 29 TRP C 108 GLY C 120 1 13 HELIX 30 30 LYS C 124 ALA C 135 1 12 HELIX 31 31 CYS C 166 CYS C 171 1 6 HELIX 32 32 ASP C 173 SER C 186 1 14 HELIX 33 33 GLY C 218 ALA C 229 1 12 HELIX 34 34 SER D 8 PHE D 16 1 9 HELIX 35 35 ASN D 17 SER D 27 1 11 HELIX 36 36 HIS D 32 LEU D 52 1 21 HELIX 37 37 ILE D 69 LEU D 73 5 5 HELIX 38 38 SER D 74 GLU D 77 5 4 HELIX 39 39 THR D 88 LYS D 100 1 13 HELIX 40 40 TRP D 108 GLU D 119 1 12 HELIX 41 41 LYS D 124 ALA D 135 1 12 HELIX 42 42 CYS D 166 CYS D 171 1 6 HELIX 43 43 ASP D 173 SER D 186 1 14 HELIX 44 44 GLY D 218 ALA D 229 1 12 SHEET 1 A 7 ILE A 136 LYS A 141 0 SHEET 2 A 7 PHE A 79 ASP A 86 1 N ILE A 82 O LYS A 137 SHEET 3 A 7 GLY A 57 ILE A 63 1 N ASP A 62 O ILE A 83 SHEET 4 A 7 ALA A 158 THR A 164 1 O LEU A 162 N ILE A 63 SHEET 5 A 7 LEU A 188 ALA A 199 1 O LYS A 189 N ALA A 158 SHEET 6 A 7 LEU A 253 ARG A 259 -1 O GLY A 258 N LEU A 194 SHEET 7 A 7 THR A 232 ILE A 239 -1 N GLU A 234 O VAL A 257 SHEET 1 B 2 TYR A 204 ILE A 207 0 SHEET 2 B 2 GLN A 210 SER A 213 -1 O GLN A 210 N ILE A 207 SHEET 1 C 7 ILE B 136 LYS B 141 0 SHEET 2 C 7 PHE B 79 ASP B 86 1 N VAL B 84 O LEU B 140 SHEET 3 C 7 GLY B 57 ILE B 63 1 N ASP B 62 O ILE B 83 SHEET 4 C 7 ALA B 158 THR B 164 1 O LEU B 162 N ILE B 63 SHEET 5 C 7 LEU B 188 ALA B 199 1 O VAL B 195 N LEU B 161 SHEET 6 C 7 LEU B 253 ARG B 259 -1 O GLY B 258 N LEU B 194 SHEET 7 C 7 THR B 232 ILE B 239 -1 N THR B 232 O ARG B 259 SHEET 1 D 2 TYR B 204 ILE B 207 0 SHEET 2 D 2 GLN B 210 SER B 213 -1 O PHE B 212 N TYR B 205 SHEET 1 E 7 ILE C 136 LYS C 141 0 SHEET 2 E 7 PHE C 79 ASP C 86 1 N ILE C 82 O LYS C 137 SHEET 3 E 7 GLY C 57 ILE C 63 1 N ASP C 62 O ILE C 83 SHEET 4 E 7 ALA C 158 THR C 164 1 O LEU C 162 N ILE C 63 SHEET 5 E 7 LEU C 188 ALA C 199 1 O VAL C 195 N LEU C 161 SHEET 6 E 7 LEU C 253 ARG C 259 -1 O GLY C 258 N LEU C 194 SHEET 7 E 7 THR C 232 ILE C 239 -1 N THR C 232 O ARG C 259 SHEET 1 F 2 TYR C 204 ILE C 207 0 SHEET 2 F 2 GLN C 210 SER C 213 -1 O GLN C 210 N ILE C 207 SHEET 1 G 7 ILE D 136 LYS D 141 0 SHEET 2 G 7 PHE D 79 ASP D 86 1 N VAL D 84 O LEU D 140 SHEET 3 G 7 GLY D 57 ILE D 63 1 N ASP D 62 O ILE D 83 SHEET 4 G 7 ALA D 158 THR D 164 1 O LEU D 162 N ILE D 63 SHEET 5 G 7 LEU D 188 ALA D 199 1 O VAL D 195 N LEU D 161 SHEET 6 G 7 LEU D 253 ARG D 259 -1 O GLY D 258 N LEU D 194 SHEET 7 G 7 THR D 232 ILE D 239 -1 N ILE D 239 O LEU D 253 SHEET 1 H 2 TYR D 204 ILE D 207 0 SHEET 2 H 2 GLN D 210 SER D 213 -1 O GLN D 210 N ILE D 207 CISPEP 1 ASN C 121 ARG C 122 0 -1.74 SITE 1 AC1 21 TYR A 12 TYR A 21 TYR A 26 GLY A 64 SITE 2 AC1 21 SER A 65 GLY A 66 THR A 68 TYR A 70 SITE 3 AC1 21 ASP A 86 TYR A 87 THR A 88 ASN A 91 SITE 4 AC1 21 CYS A 142 ASP A 143 VAL A 144 THR A 164 SITE 5 AC1 21 LEU A 165 ALA A 170 HOH A4014 HOH A4070 SITE 6 AC1 21 HOH A4075 SITE 1 AC2 18 TYR B 12 TYR B 21 TYR B 26 GLY B 64 SITE 2 AC2 18 SER B 65 GLY B 66 THR B 68 TYR B 70 SITE 3 AC2 18 ASP B 86 TYR B 87 THR B 88 ASN B 91 SITE 4 AC2 18 ASP B 143 VAL B 144 THR B 164 LEU B 165 SITE 5 AC2 18 ALA B 170 HOH B4038 SITE 1 AC3 20 TYR C 12 TYR C 21 TYR C 26 GLY C 64 SITE 2 AC3 20 SER C 65 GLY C 66 THR C 68 TYR C 70 SITE 3 AC3 20 ASP C 86 TYR C 87 THR C 88 ASN C 91 SITE 4 AC3 20 CYS C 142 ASP C 143 VAL C 144 THR C 145 SITE 5 AC3 20 THR C 164 LEU C 165 HOH C4022 HOH C4043 SITE 1 AC4 19 TYR D 12 TYR D 21 TYR D 26 GLY D 64 SITE 2 AC4 19 SER D 65 GLY D 66 THR D 68 TYR D 70 SITE 3 AC4 19 ASP D 86 TYR D 87 THR D 88 ASN D 91 SITE 4 AC4 19 CYS D 142 ASP D 143 VAL D 144 THR D 164 SITE 5 AC4 19 LEU D 165 HOH D4026 HOH D4036 CRYST1 47.281 158.519 72.227 90.00 92.92 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021150 0.000000 0.001078 0.00000 SCALE2 0.000000 0.006308 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013863 0.00000