PDB Short entry for 2J2M HEADER OXIDOREDUCTASE 17-AUG-06 2J2M TITLE CRYSTAL STRUCTURE ANALYSIS OF CATALASE FROM EXIGUOBACTERIUM TITLE 2 OXIDOTOLERANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATALASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.11.1.6 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EXIGUOBACTERIUM OXIDOTOLERANS; SOURCE 3 ORGANISM_TAXID: 223958; SOURCE 4 STRAIN: T-2-2T KEYWDS FUNCTIONAL CLASS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.HARA,N.ICHISE,K.KOJIMA,H.KONDO,S.OHGIYA,H.MATSUYAMA, AUTHOR 2 I.YUMOTO REVDAT 2 24-FEB-09 2J2M 1 VERSN REVDAT 1 16-JAN-07 2J2M 0 JRNL AUTH I.HARA,N.ICHISE,K.KOJIMA,H.KONDO,S.OHGIYA, JRNL AUTH 2 H.MATSUYAMA,I.YUMOTO JRNL TITL RELATIONSHIP BETWEEN THE SIZE OF THE BOTTLENECK 15 JRNL TITL 2 A FROM IRON IN THE MAIN CHANNEL AND THE REACTIVITY JRNL TITL 3 OF CATALASE CORRESPONDING TO THE MOLECULAR SIZE OF JRNL TITL 4 SUBSTRATES. JRNL REF BIOCHEMISTRY V. 46 11 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17198371 JRNL DOI 10.1021/BI061519W REMARK 2 REMARK 2 RESOLUTION. 2.4 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 94615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4994 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6822 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2010 REMARK 3 BIN FREE R VALUE SET COUNT : 321 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15576 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 172 REMARK 3 SOLVENT ATOMS : 536 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.60000 REMARK 3 B22 (A**2) : -0.27000 REMARK 3 B33 (A**2) : 1.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.39000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.363 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.234 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.259 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.907 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.881 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 16188 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 22024 ; 1.430 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1916 ; 6.423 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 892 ;38.395 ;24.529 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2620 ;18.062 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 108 ;18.705 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2260 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12880 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 7846 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 10792 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1052 ; 0.140 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.144 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.078 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 9891 ; 0.620 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 15584 ; 1.000 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7164 ; 1.648 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 6432 ; 2.474 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2J2M COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-AUG-06. REMARK 100 THE PDBE ID CODE IS EBI-29727. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTONFACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99632 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.06000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 10.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 8CAT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.1 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES PH6.0, REMARK 280 12-13%(W/V)PEG10000, 5%(W/V)PEG400 AND 20%(W/V)GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 65.96750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLU A 3 REMARK 465 ASN A 4 REMARK 465 GLU A 5 REMARK 465 LEU A 486 REMARK 465 GLN A 487 REMARK 465 GLN A 488 REMARK 465 MET A 489 REMARK 465 GLN A 490 REMARK 465 LYS A 491 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLU B 3 REMARK 465 ASN B 4 REMARK 465 GLU B 5 REMARK 465 LEU B 486 REMARK 465 GLN B 487 REMARK 465 GLN B 488 REMARK 465 MET B 489 REMARK 465 GLN B 490 REMARK 465 LYS B 491 REMARK 465 MET C 1 REMARK 465 ASN C 2 REMARK 465 GLU C 3 REMARK 465 ASN C 4 REMARK 465 GLU C 5 REMARK 465 LEU C 486 REMARK 465 GLN C 487 REMARK 465 GLN C 488 REMARK 465 MET C 489 REMARK 465 GLN C 490 REMARK 465 LYS C 491 REMARK 465 MET D 1 REMARK 465 ASN D 2 REMARK 465 GLU D 3 REMARK 465 ASN D 4 REMARK 465 GLU D 5 REMARK 465 LEU D 486 REMARK 465 GLN D 487 REMARK 465 GLN D 488 REMARK 465 MET D 489 REMARK 465 GLN D 490 REMARK 465 LYS D 491 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 101 - O THR B 101 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 278 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG B 137 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 216 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 216 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG C 216 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 170 72.69 -118.71 REMARK 500 VAL A 198 -56.58 66.83 REMARK 500 GLU A 309 -70.80 -113.70 REMARK 500 ASP A 329 116.27 -31.61 REMARK 500 VAL B 97 -62.48 -122.55 REMARK 500 VAL B 198 -59.12 62.80 REMARK 500 GLU B 309 -77.81 -110.78 REMARK 500 ASP B 329 116.06 -38.81 REMARK 500 ASN B 419 59.96 37.21 REMARK 500 ASN C 11 -7.24 -59.99 REMARK 500 ASP C 35 80.73 -68.62 REMARK 500 VAL C 97 -55.78 -123.29 REMARK 500 VAL C 198 -62.57 66.20 REMARK 500 GLU C 309 -72.28 -107.75 REMARK 500 PRO C 484 -100.83 -80.80 REMARK 500 ASP D 35 78.30 -67.29 REMARK 500 VAL D 97 -58.89 -121.27 REMARK 500 ASP D 109 143.15 -172.75 REMARK 500 ASN D 156 30.18 72.38 REMARK 500 ARG D 170 71.78 -118.86 REMARK 500 VAL D 198 -60.61 62.71 REMARK 500 GLU D 309 -74.57 -115.89 REMARK 500 PRO D 484 -104.31 -79.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 478 ASN A 479 -39.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LEU A 478 21.2 L L OUTSIDE RANGE REMARK 500 LEU B 478 18.9 L L OUTSIDE RANGE REMARK 500 LEU C 478 22.8 L L OUTSIDE RANGE REMARK 500 LEU D 478 22.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 339 OH REMARK 620 2 HEM A 501 NB 92.6 REMARK 620 3 HEM A 501 NC 102.5 88.4 REMARK 620 4 HEM A 501 NA 93.0 86.1 163.8 REMARK 620 5 HEM A 501 ND 104.3 163.0 89.9 91.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEM B 501 NB REMARK 620 2 HEM B 501 NC 90.8 REMARK 620 3 TYR B 339 OH 88.3 100.5 REMARK 620 4 HEM B 501 NA 87.2 169.6 89.6 REMARK 620 5 HEM B 501 ND 167.8 88.7 103.8 91.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEM C 501 NA REMARK 620 2 HEM C 501 ND 89.2 REMARK 620 3 TYR C 339 OH 89.1 103.1 REMARK 620 4 HEM C 501 NB 91.4 171.5 85.4 REMARK 620 5 HEM C 501 NC 170.8 90.6 99.9 87.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM D 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR D 339 OH REMARK 620 2 HEM D 501 NA 92.1 REMARK 620 3 HEM D 501 NB 91.5 91.5 REMARK 620 4 HEM D 501 NC 101.5 166.4 89.1 REMARK 620 5 HEM D 501 ND 102.3 86.0 166.1 90.2 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 10-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 11-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 REMARK 700 THE SHEETS PRESENTED AS "BB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 10-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 11-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 REMARK 700 THE SHEETS PRESENTED AS "CA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 9-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 10-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 REMARK 700 THE SHEETS PRESENTED AS "DA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 9-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 10-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM D 501 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THIS CATALASE HAS BEEN DEPOSITED TO DDBJ REMARK 999 WITH ACCESSION NUMBER OF AB266484 DBREF 2J2M A 1 491 PDB 2J2M 2J2M 1 491 DBREF 2J2M B 1 491 PDB 2J2M 2J2M 1 491 DBREF 2J2M C 1 491 PDB 2J2M 2J2M 1 491 DBREF 2J2M D 1 491 PDB 2J2M 2J2M 1 491 SEQRES 1 A 491 MET ASN GLU ASN GLU LYS LYS LEU THR THR ASN GLN GLY SEQRES 2 A 491 VAL PRO ILE GLY ASP ASN GLN ASN SER ARG THR ALA GLY SEQRES 3 A 491 ARG ARG GLY PRO THR LEU LEU GLU ASP TYR GLN LEU ILE SEQRES 4 A 491 GLU LYS ILE ALA HIS PHE ASP ARG GLU ARG VAL PRO GLU SEQRES 5 A 491 ARG VAL VAL HIS ALA ARG GLY PHE GLY ALA HIS GLY VAL SEQRES 6 A 491 PHE LYS VAL LYS ASN SER MET LYS LYS TYR THR LYS ALA SEQRES 7 A 491 ALA PHE LEU GLN GLU GLU GLY THR GLU VAL PRO VAL PHE SEQRES 8 A 491 ALA ARG PHE SER THR VAL ILE HIS GLY THR HIS SER PRO SEQRES 9 A 491 GLU THR LEU ARG ASP PRO ARG GLY PHE SER VAL LYS PHE SEQRES 10 A 491 TYR THR GLU GLU GLY ASN TRP ASP PHE VAL GLY ASN ASN SEQRES 11 A 491 LEU PRO VAL PHE PHE ILE ARG ASP ALA MET LYS PHE PRO SEQRES 12 A 491 ASP MET VAL HIS SER LEU LYS PRO ASP PRO ARG THR ASN SEQRES 13 A 491 ILE GLN ASP PRO ASP ARG TYR TRP ASP PHE MET THR LEU SEQRES 14 A 491 ARG PRO GLU SER THR ASN MET LEU MET HIS ILE PHE THR SEQRES 15 A 491 ASP GLU GLY ILE PRO ALA SER TYR ARG LYS MET ARG GLY SEQRES 16 A 491 SER SER VAL HIS SER PHE LYS TRP VAL ASN ALA HIS GLY SEQRES 17 A 491 ASN THR VAL TYR ILE LYS LEU ARG TRP VAL PRO LYS GLU SEQRES 18 A 491 GLY VAL HIS ASN LEU SER ALA ASP GLU ALA THR GLU VAL SEQRES 19 A 491 GLN GLY LYS ASP PHE ASN HIS ALA SER ASN ASP THR PHE SEQRES 20 A 491 GLN ALA ILE GLU ASN GLY ASP PHE PRO GLU TRP ASP LEU SEQRES 21 A 491 PHE VAL GLN VAL LEU ASP PRO ALA ASP VAL GLU ASN PHE SEQRES 22 A 491 ASP PHE ASP PRO LEU ASP ALA THR LYS ASP TRP PHE GLU SEQRES 23 A 491 ASP VAL ILE PRO PHE GLN HIS VAL GLY THR MET THR LEU SEQRES 24 A 491 ASN LYS ASN VAL ASP ASN TYR PHE ALA GLU THR GLU SER SEQRES 25 A 491 VAL GLY PHE ASN PRO GLY VAL LEU VAL PRO GLY MET LEU SEQRES 26 A 491 PRO SER GLU ASP LYS LEU LEU GLN GLY ARG LEU PHE SER SEQRES 27 A 491 TYR SER ASP THR GLN ARG HIS ARG ILE GLY PRO ASN TYR SEQRES 28 A 491 GLN GLN LEU PRO ILE ASN CYS PRO PHE ALA GLN VAL ASN SEQRES 29 A 491 ASN TYR GLN ARG ASP GLY ALA MET PRO PHE LYS GLN GLN SEQRES 30 A 491 THR SER SER VAL ASN TYR GLU PRO ASN ARG TYR GLN ASP SEQRES 31 A 491 GLU PRO LYS GLN THR PRO GLU TYR THR GLU ASP THR GLN SEQRES 32 A 491 PRO LEU HIS ASP ASP ILE HIS GLY ARG LEU GLU ILE GLU SEQRES 33 A 491 LYS THR ASN ASN PHE GLY GLN ALA GLY GLU VAL TYR ARG SEQRES 34 A 491 ARG MET THR GLU GLU GLU GLN MET ALA LEU LEU ASN ASN SEQRES 35 A 491 LEU VAL ASN ASP LEU GLN GLN VAL ARG HIS GLU ASN THR SEQRES 36 A 491 VAL LEU LEU ALA ILE CYS ASN PHE TYR ARG ALA ASP ALA SEQRES 37 A 491 SER LEU GLY GLU LYS LEU SER GLU ALA LEU ASN VAL ASP SEQRES 38 A 491 ILE LYS PRO PHE LEU GLN GLN MET GLN LYS SEQRES 1 B 491 MET ASN GLU ASN GLU LYS LYS LEU THR THR ASN GLN GLY SEQRES 2 B 491 VAL PRO ILE GLY ASP ASN GLN ASN SER ARG THR ALA GLY SEQRES 3 B 491 ARG ARG GLY PRO THR LEU LEU GLU ASP TYR GLN LEU ILE SEQRES 4 B 491 GLU LYS ILE ALA HIS PHE ASP ARG GLU ARG VAL PRO GLU SEQRES 5 B 491 ARG VAL VAL HIS ALA ARG GLY PHE GLY ALA HIS GLY VAL SEQRES 6 B 491 PHE LYS VAL LYS ASN SER MET LYS LYS TYR THR LYS ALA SEQRES 7 B 491 ALA PHE LEU GLN GLU GLU GLY THR GLU VAL PRO VAL PHE SEQRES 8 B 491 ALA ARG PHE SER THR VAL ILE HIS GLY THR HIS SER PRO SEQRES 9 B 491 GLU THR LEU ARG ASP PRO ARG GLY PHE SER VAL LYS PHE SEQRES 10 B 491 TYR THR GLU GLU GLY ASN TRP ASP PHE VAL GLY ASN ASN SEQRES 11 B 491 LEU PRO VAL PHE PHE ILE ARG ASP ALA MET LYS PHE PRO SEQRES 12 B 491 ASP MET VAL HIS SER LEU LYS PRO ASP PRO ARG THR ASN SEQRES 13 B 491 ILE GLN ASP PRO ASP ARG TYR TRP ASP PHE MET THR LEU SEQRES 14 B 491 ARG PRO GLU SER THR ASN MET LEU MET HIS ILE PHE THR SEQRES 15 B 491 ASP GLU GLY ILE PRO ALA SER TYR ARG LYS MET ARG GLY SEQRES 16 B 491 SER SER VAL HIS SER PHE LYS TRP VAL ASN ALA HIS GLY SEQRES 17 B 491 ASN THR VAL TYR ILE LYS LEU ARG TRP VAL PRO LYS GLU SEQRES 18 B 491 GLY VAL HIS ASN LEU SER ALA ASP GLU ALA THR GLU VAL SEQRES 19 B 491 GLN GLY LYS ASP PHE ASN HIS ALA SER ASN ASP THR PHE SEQRES 20 B 491 GLN ALA ILE GLU ASN GLY ASP PHE PRO GLU TRP ASP LEU SEQRES 21 B 491 PHE VAL GLN VAL LEU ASP PRO ALA ASP VAL GLU ASN PHE SEQRES 22 B 491 ASP PHE ASP PRO LEU ASP ALA THR LYS ASP TRP PHE GLU SEQRES 23 B 491 ASP VAL ILE PRO PHE GLN HIS VAL GLY THR MET THR LEU SEQRES 24 B 491 ASN LYS ASN VAL ASP ASN TYR PHE ALA GLU THR GLU SER SEQRES 25 B 491 VAL GLY PHE ASN PRO GLY VAL LEU VAL PRO GLY MET LEU SEQRES 26 B 491 PRO SER GLU ASP LYS LEU LEU GLN GLY ARG LEU PHE SER SEQRES 27 B 491 TYR SER ASP THR GLN ARG HIS ARG ILE GLY PRO ASN TYR SEQRES 28 B 491 GLN GLN LEU PRO ILE ASN CYS PRO PHE ALA GLN VAL ASN SEQRES 29 B 491 ASN TYR GLN ARG ASP GLY ALA MET PRO PHE LYS GLN GLN SEQRES 30 B 491 THR SER SER VAL ASN TYR GLU PRO ASN ARG TYR GLN ASP SEQRES 31 B 491 GLU PRO LYS GLN THR PRO GLU TYR THR GLU ASP THR GLN SEQRES 32 B 491 PRO LEU HIS ASP ASP ILE HIS GLY ARG LEU GLU ILE GLU SEQRES 33 B 491 LYS THR ASN ASN PHE GLY GLN ALA GLY GLU VAL TYR ARG SEQRES 34 B 491 ARG MET THR GLU GLU GLU GLN MET ALA LEU LEU ASN ASN SEQRES 35 B 491 LEU VAL ASN ASP LEU GLN GLN VAL ARG HIS GLU ASN THR SEQRES 36 B 491 VAL LEU LEU ALA ILE CYS ASN PHE TYR ARG ALA ASP ALA SEQRES 37 B 491 SER LEU GLY GLU LYS LEU SER GLU ALA LEU ASN VAL ASP SEQRES 38 B 491 ILE LYS PRO PHE LEU GLN GLN MET GLN LYS SEQRES 1 C 491 MET ASN GLU ASN GLU LYS LYS LEU THR THR ASN GLN GLY SEQRES 2 C 491 VAL PRO ILE GLY ASP ASN GLN ASN SER ARG THR ALA GLY SEQRES 3 C 491 ARG ARG GLY PRO THR LEU LEU GLU ASP TYR GLN LEU ILE SEQRES 4 C 491 GLU LYS ILE ALA HIS PHE ASP ARG GLU ARG VAL PRO GLU SEQRES 5 C 491 ARG VAL VAL HIS ALA ARG GLY PHE GLY ALA HIS GLY VAL SEQRES 6 C 491 PHE LYS VAL LYS ASN SER MET LYS LYS TYR THR LYS ALA SEQRES 7 C 491 ALA PHE LEU GLN GLU GLU GLY THR GLU VAL PRO VAL PHE SEQRES 8 C 491 ALA ARG PHE SER THR VAL ILE HIS GLY THR HIS SER PRO SEQRES 9 C 491 GLU THR LEU ARG ASP PRO ARG GLY PHE SER VAL LYS PHE SEQRES 10 C 491 TYR THR GLU GLU GLY ASN TRP ASP PHE VAL GLY ASN ASN SEQRES 11 C 491 LEU PRO VAL PHE PHE ILE ARG ASP ALA MET LYS PHE PRO SEQRES 12 C 491 ASP MET VAL HIS SER LEU LYS PRO ASP PRO ARG THR ASN SEQRES 13 C 491 ILE GLN ASP PRO ASP ARG TYR TRP ASP PHE MET THR LEU SEQRES 14 C 491 ARG PRO GLU SER THR ASN MET LEU MET HIS ILE PHE THR SEQRES 15 C 491 ASP GLU GLY ILE PRO ALA SER TYR ARG LYS MET ARG GLY SEQRES 16 C 491 SER SER VAL HIS SER PHE LYS TRP VAL ASN ALA HIS GLY SEQRES 17 C 491 ASN THR VAL TYR ILE LYS LEU ARG TRP VAL PRO LYS GLU SEQRES 18 C 491 GLY VAL HIS ASN LEU SER ALA ASP GLU ALA THR GLU VAL SEQRES 19 C 491 GLN GLY LYS ASP PHE ASN HIS ALA SER ASN ASP THR PHE SEQRES 20 C 491 GLN ALA ILE GLU ASN GLY ASP PHE PRO GLU TRP ASP LEU SEQRES 21 C 491 PHE VAL GLN VAL LEU ASP PRO ALA ASP VAL GLU ASN PHE SEQRES 22 C 491 ASP PHE ASP PRO LEU ASP ALA THR LYS ASP TRP PHE GLU SEQRES 23 C 491 ASP VAL ILE PRO PHE GLN HIS VAL GLY THR MET THR LEU SEQRES 24 C 491 ASN LYS ASN VAL ASP ASN TYR PHE ALA GLU THR GLU SER SEQRES 25 C 491 VAL GLY PHE ASN PRO GLY VAL LEU VAL PRO GLY MET LEU SEQRES 26 C 491 PRO SER GLU ASP LYS LEU LEU GLN GLY ARG LEU PHE SER SEQRES 27 C 491 TYR SER ASP THR GLN ARG HIS ARG ILE GLY PRO ASN TYR SEQRES 28 C 491 GLN GLN LEU PRO ILE ASN CYS PRO PHE ALA GLN VAL ASN SEQRES 29 C 491 ASN TYR GLN ARG ASP GLY ALA MET PRO PHE LYS GLN GLN SEQRES 30 C 491 THR SER SER VAL ASN TYR GLU PRO ASN ARG TYR GLN ASP SEQRES 31 C 491 GLU PRO LYS GLN THR PRO GLU TYR THR GLU ASP THR GLN SEQRES 32 C 491 PRO LEU HIS ASP ASP ILE HIS GLY ARG LEU GLU ILE GLU SEQRES 33 C 491 LYS THR ASN ASN PHE GLY GLN ALA GLY GLU VAL TYR ARG SEQRES 34 C 491 ARG MET THR GLU GLU GLU GLN MET ALA LEU LEU ASN ASN SEQRES 35 C 491 LEU VAL ASN ASP LEU GLN GLN VAL ARG HIS GLU ASN THR SEQRES 36 C 491 VAL LEU LEU ALA ILE CYS ASN PHE TYR ARG ALA ASP ALA SEQRES 37 C 491 SER LEU GLY GLU LYS LEU SER GLU ALA LEU ASN VAL ASP SEQRES 38 C 491 ILE LYS PRO PHE LEU GLN GLN MET GLN LYS SEQRES 1 D 491 MET ASN GLU ASN GLU LYS LYS LEU THR THR ASN GLN GLY SEQRES 2 D 491 VAL PRO ILE GLY ASP ASN GLN ASN SER ARG THR ALA GLY SEQRES 3 D 491 ARG ARG GLY PRO THR LEU LEU GLU ASP TYR GLN LEU ILE SEQRES 4 D 491 GLU LYS ILE ALA HIS PHE ASP ARG GLU ARG VAL PRO GLU SEQRES 5 D 491 ARG VAL VAL HIS ALA ARG GLY PHE GLY ALA HIS GLY VAL SEQRES 6 D 491 PHE LYS VAL LYS ASN SER MET LYS LYS TYR THR LYS ALA SEQRES 7 D 491 ALA PHE LEU GLN GLU GLU GLY THR GLU VAL PRO VAL PHE SEQRES 8 D 491 ALA ARG PHE SER THR VAL ILE HIS GLY THR HIS SER PRO SEQRES 9 D 491 GLU THR LEU ARG ASP PRO ARG GLY PHE SER VAL LYS PHE SEQRES 10 D 491 TYR THR GLU GLU GLY ASN TRP ASP PHE VAL GLY ASN ASN SEQRES 11 D 491 LEU PRO VAL PHE PHE ILE ARG ASP ALA MET LYS PHE PRO SEQRES 12 D 491 ASP MET VAL HIS SER LEU LYS PRO ASP PRO ARG THR ASN SEQRES 13 D 491 ILE GLN ASP PRO ASP ARG TYR TRP ASP PHE MET THR LEU SEQRES 14 D 491 ARG PRO GLU SER THR ASN MET LEU MET HIS ILE PHE THR SEQRES 15 D 491 ASP GLU GLY ILE PRO ALA SER TYR ARG LYS MET ARG GLY SEQRES 16 D 491 SER SER VAL HIS SER PHE LYS TRP VAL ASN ALA HIS GLY SEQRES 17 D 491 ASN THR VAL TYR ILE LYS LEU ARG TRP VAL PRO LYS GLU SEQRES 18 D 491 GLY VAL HIS ASN LEU SER ALA ASP GLU ALA THR GLU VAL SEQRES 19 D 491 GLN GLY LYS ASP PHE ASN HIS ALA SER ASN ASP THR PHE SEQRES 20 D 491 GLN ALA ILE GLU ASN GLY ASP PHE PRO GLU TRP ASP LEU SEQRES 21 D 491 PHE VAL GLN VAL LEU ASP PRO ALA ASP VAL GLU ASN PHE SEQRES 22 D 491 ASP PHE ASP PRO LEU ASP ALA THR LYS ASP TRP PHE GLU SEQRES 23 D 491 ASP VAL ILE PRO PHE GLN HIS VAL GLY THR MET THR LEU SEQRES 24 D 491 ASN LYS ASN VAL ASP ASN TYR PHE ALA GLU THR GLU SER SEQRES 25 D 491 VAL GLY PHE ASN PRO GLY VAL LEU VAL PRO GLY MET LEU SEQRES 26 D 491 PRO SER GLU ASP LYS LEU LEU GLN GLY ARG LEU PHE SER SEQRES 27 D 491 TYR SER ASP THR GLN ARG HIS ARG ILE GLY PRO ASN TYR SEQRES 28 D 491 GLN GLN LEU PRO ILE ASN CYS PRO PHE ALA GLN VAL ASN SEQRES 29 D 491 ASN TYR GLN ARG ASP GLY ALA MET PRO PHE LYS GLN GLN SEQRES 30 D 491 THR SER SER VAL ASN TYR GLU PRO ASN ARG TYR GLN ASP SEQRES 31 D 491 GLU PRO LYS GLN THR PRO GLU TYR THR GLU ASP THR GLN SEQRES 32 D 491 PRO LEU HIS ASP ASP ILE HIS GLY ARG LEU GLU ILE GLU SEQRES 33 D 491 LYS THR ASN ASN PHE GLY GLN ALA GLY GLU VAL TYR ARG SEQRES 34 D 491 ARG MET THR GLU GLU GLU GLN MET ALA LEU LEU ASN ASN SEQRES 35 D 491 LEU VAL ASN ASP LEU GLN GLN VAL ARG HIS GLU ASN THR SEQRES 36 D 491 VAL LEU LEU ALA ILE CYS ASN PHE TYR ARG ALA ASP ALA SEQRES 37 D 491 SER LEU GLY GLU LYS LEU SER GLU ALA LEU ASN VAL ASP SEQRES 38 D 491 ILE LYS PRO PHE LEU GLN GLN MET GLN LYS HET HEM A 501 43 HET HEM B 501 43 HET HEM C 501 43 HET HEM D 501 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM [DIHYDROGEN 3,7,12,17-TETRAMETHYL-8,13- HETSYN 2 HEM DIVINYL-2,18-PORPHINEDIPROPIONATO(2-)]IRON FORMUL 5 HEM 4(C34 H32 FE N4 O4) FORMUL 9 HOH *536(H2 O1) HELIX 1 1 ASP A 35 ASP A 46 1 12 HELIX 2 2 ALA A 78 GLN A 82 5 5 HELIX 3 3 ASP A 138 MET A 140 5 3 HELIX 4 4 LYS A 141 LYS A 150 1 10 HELIX 5 5 ASP A 159 ARG A 170 1 12 HELIX 6 6 SER A 173 PHE A 181 1 9 HELIX 7 7 THR A 182 ILE A 186 5 5 HELIX 8 8 SER A 189 MET A 193 5 5 HELIX 9 9 SER A 227 ASP A 238 1 12 HELIX 10 10 ASN A 240 ASN A 252 1 13 HELIX 11 11 ASP A 266 PHE A 273 5 8 HELIX 12 12 TYR A 306 SER A 312 0 7 HELIX 13 13 ASP A 329 ILE A 347 1 19 HELIX 14 14 ASN A 350 LEU A 354 5 5 HELIX 15 15 THR A 395 THR A 399 5 5 HELIX 16 16 PHE A 421 MET A 431 1 11 HELIX 17 17 THR A 432 GLN A 448 1 17 HELIX 18 18 HIS A 452 ASP A 467 1 16 HELIX 19 19 ASP A 467 LEU A 478 1 12 HELIX 20 20 ASP B 35 ASP B 46 1 12 HELIX 21 21 ALA B 78 GLN B 82 5 5 HELIX 22 22 ASP B 138 MET B 140 5 3 HELIX 23 23 LYS B 141 LYS B 150 1 10 HELIX 24 24 ASP B 159 ARG B 170 1 12 HELIX 25 25 SER B 173 PHE B 181 1 9 HELIX 26 26 THR B 182 ILE B 186 5 5 HELIX 27 27 SER B 189 MET B 193 5 5 HELIX 28 28 SER B 227 ASP B 238 1 12 HELIX 29 29 ASN B 240 ASN B 252 1 13 HELIX 30 30 ASP B 266 PHE B 273 5 8 HELIX 31 31 TYR B 306 SER B 312 0 7 HELIX 32 32 ASP B 329 ILE B 347 1 19 HELIX 33 33 ASN B 350 LEU B 354 5 5 HELIX 34 34 THR B 395 THR B 399 5 5 HELIX 35 35 PHE B 421 MET B 431 1 11 HELIX 36 36 THR B 432 GLN B 448 1 17 HELIX 37 37 HIS B 452 ASP B 467 1 16 HELIX 38 38 ASP B 467 ASN B 479 1 13 HELIX 39 39 ASP C 35 ASP C 46 1 12 HELIX 40 40 ALA C 78 GLN C 82 5 5 HELIX 41 41 ASP C 138 MET C 140 5 3 HELIX 42 42 LYS C 141 LYS C 150 1 10 HELIX 43 43 ASP C 159 ARG C 170 1 12 HELIX 44 44 SER C 173 PHE C 181 1 9 HELIX 45 45 THR C 182 ILE C 186 5 5 HELIX 46 46 SER C 189 MET C 193 5 5 HELIX 47 47 SER C 227 ASP C 238 1 12 HELIX 48 48 ASN C 240 ASN C 252 1 13 HELIX 49 49 ASP C 266 VAL C 270 5 5 HELIX 50 50 ASN C 305 THR C 310 1 6 HELIX 51 51 ASP C 329 ILE C 347 1 19 HELIX 52 52 ASN C 350 LEU C 354 5 5 HELIX 53 53 THR C 395 THR C 399 5 5 HELIX 54 54 PHE C 421 MET C 431 1 11 HELIX 55 55 THR C 432 GLN C 448 1 17 HELIX 56 56 HIS C 452 ASP C 467 1 16 HELIX 57 57 ASP C 467 ASN C 479 1 13 HELIX 58 58 ASP D 35 ASP D 46 1 12 HELIX 59 59 ALA D 78 GLN D 82 5 5 HELIX 60 60 ASP D 138 MET D 140 5 3 HELIX 61 61 LYS D 141 LYS D 150 1 10 HELIX 62 62 ASP D 159 ARG D 170 1 12 HELIX 63 63 SER D 173 PHE D 181 1 9 HELIX 64 64 THR D 182 ILE D 186 5 5 HELIX 65 65 SER D 189 MET D 193 5 5 HELIX 66 66 SER D 227 ASP D 238 1 12 HELIX 67 67 ASN D 240 ASN D 252 1 13 HELIX 68 68 ASP D 266 VAL D 270 5 5 HELIX 69 69 ASN D 305 THR D 310 1 6 HELIX 70 70 LEU D 331 ILE D 347 1 17 HELIX 71 71 ASN D 350 LEU D 354 5 5 HELIX 72 72 THR D 395 THR D 399 5 5 HELIX 73 73 PHE D 421 MET D 431 1 11 HELIX 74 74 THR D 432 GLN D 448 1 17 HELIX 75 75 HIS D 452 ASP D 467 1 16 HELIX 76 76 ASP D 467 ASN D 479 1 13 SHEET 1 AA 3 ARG A 23 THR A 24 0 SHEET 2 AA 3 ILE B 409 ARG B 412 -1 O GLY B 411 N THR A 24 SHEET 3 AA 3 GLN C 403 PRO C 404 -1 O GLN C 403 N HIS B 410 SHEET 1 AB11 GLY A 59 VAL A 68 0 SHEET 2 AB11 GLU A 87 SER A 95 -1 O VAL A 88 N PHE A 66 SHEET 3 AB11 GLY A 112 THR A 119 -1 O GLY A 112 N SER A 95 SHEET 4 AB11 GLY A 122 ASN A 129 -1 O GLY A 122 N THR A 119 SHEET 5 AB11 GLY A 195 SER A 196 -1 O SER A 196 N ASN A 129 SHEET 6 AB11 THR A 210 PRO A 219 -1 O TRP A 217 N GLY A 195 SHEET 7 AB11 GLU A 257 LEU A 265 -1 O ASP A 259 N VAL A 218 SHEET 8 AB11 GLN A 292 ASN A 302 -1 O GLN A 292 N VAL A 262 SHEET 9 AB11 GLY A 59 VAL A 68 -1 O HIS A 63 N LYS A 301 SHEET 10 AB11 GLU A 87 SER A 95 -1 O VAL A 88 N PHE A 66 SHEET 11 AB11 GLY A 59 VAL A 68 -1 O PHE A 60 N PHE A 94 SHEET 1 AC 3 GLN A 403 PRO A 404 0 SHEET 2 AC 3 ILE D 409 ARG D 412 -1 O HIS D 410 N GLN A 403 SHEET 3 AC 3 ARG C 23 THR C 24 -1 N THR C 24 O GLY D 411 SHEET 1 BA 3 ARG B 23 THR B 24 0 SHEET 2 BA 3 ILE A 409 ARG A 412 -1 O GLY A 411 N THR B 24 SHEET 3 BA 3 GLN D 403 PRO D 404 -1 O GLN D 403 N HIS A 410 SHEET 1 BB11 GLY B 59 VAL B 68 0 SHEET 2 BB11 GLU B 87 SER B 95 -1 O VAL B 88 N PHE B 66 SHEET 3 BB11 GLY B 112 THR B 119 -1 O GLY B 112 N SER B 95 SHEET 4 BB11 GLY B 122 ASN B 129 -1 O GLY B 122 N THR B 119 SHEET 5 BB11 GLY B 195 SER B 196 -1 O SER B 196 N ASN B 129 SHEET 6 BB11 THR B 210 PRO B 219 -1 O TRP B 217 N GLY B 195 SHEET 7 BB11 GLU B 257 LEU B 265 -1 O ASP B 259 N VAL B 218 SHEET 8 BB11 GLN B 292 ASN B 302 -1 O GLN B 292 N VAL B 262 SHEET 9 BB11 GLY B 59 VAL B 68 -1 O HIS B 63 N LYS B 301 SHEET 10 BB11 GLU B 87 SER B 95 -1 O VAL B 88 N PHE B 66 SHEET 11 BB11 GLY B 59 VAL B 68 -1 O PHE B 60 N PHE B 94 SHEET 1 BC 3 GLN B 403 PRO B 404 0 SHEET 2 BC 3 ILE C 409 ARG C 412 -1 O HIS C 410 N GLN B 403 SHEET 3 BC 3 ARG D 23 THR D 24 -1 O THR D 24 N GLY C 411 SHEET 1 CA22 GLY C 59 VAL C 68 0 SHEET 2 CA22 GLU C 87 SER C 95 -1 O VAL C 88 N PHE C 66 SHEET 3 CA22 GLY C 112 THR C 119 -1 O GLY C 112 N SER C 95 SHEET 4 CA22 GLY C 122 ASN C 129 -1 O GLY C 122 N THR C 119 SHEET 5 CA22 GLU C 87 SER C 95 SHEET 6 CA22 GLY C 59 VAL C 68 -1 O PHE C 60 N PHE C 94 SHEET 7 CA22 GLY C 112 THR C 119 SHEET 8 CA22 GLU C 87 SER C 95 -1 O PRO C 89 N TYR C 118 SHEET 9 CA22 GLY C 122 ASN C 129 SHEET 10 CA22 GLY C 112 THR C 119 -1 O PHE C 113 N GLY C 128 SHEET 11 CA22 GLY C 195 SER C 196 SHEET 12 CA22 GLY C 122 ASN C 129 -1 O ASN C 129 N SER C 196 SHEET 13 CA22 PHE C 201 VAL C 204 SHEET 14 CA22 THR C 210 PRO C 219 -1 O VAL C 211 N TRP C 203 SHEET 15 CA22 THR C 210 PRO C 219 SHEET 16 CA22 GLY C 195 SER C 196 -1 O GLY C 195 N TRP C 217 SHEET 17 CA22 GLU C 257 LEU C 265 SHEET 18 CA22 THR C 210 PRO C 219 -1 O TYR C 212 N LEU C 265 SHEET 19 CA22 GLN C 292 ASN C 302 SHEET 20 CA22 GLY C 59 VAL C 68 -1 O HIS C 63 N LYS C 301 SHEET 21 CA22 MET C 324 PRO C 326 SHEET 22 CA22 PHE C 201 VAL C 204 -1 O LYS C 202 N LEU C 325 SHEET 1 DA20 GLY D 59 VAL D 68 0 SHEET 2 DA20 GLU D 87 SER D 95 -1 O VAL D 88 N PHE D 66 SHEET 3 DA20 GLU D 87 SER D 95 SHEET 4 DA20 GLY D 59 VAL D 68 -1 O PHE D 60 N PHE D 94 SHEET 5 DA20 GLY D 112 THR D 119 SHEET 6 DA20 GLU D 87 SER D 95 -1 O PRO D 89 N TYR D 118 SHEET 7 DA20 GLY D 122 ASN D 129 SHEET 8 DA20 GLY D 112 THR D 119 -1 O PHE D 113 N GLY D 128 SHEET 9 DA20 GLY D 195 SER D 196 SHEET 10 DA20 GLY D 122 ASN D 129 -1 O ASN D 129 N SER D 196 SHEET 11 DA20 PHE D 201 VAL D 204 SHEET 12 DA20 THR D 210 PRO D 219 -1 O VAL D 211 N TRP D 203 SHEET 13 DA20 THR D 210 PRO D 219 SHEET 14 DA20 GLY D 195 SER D 196 -1 O GLY D 195 N TRP D 217 SHEET 15 DA20 GLU D 257 LEU D 265 SHEET 16 DA20 THR D 210 PRO D 219 -1 O TYR D 212 N LEU D 265 SHEET 17 DA20 PHE D 291 ASN D 302 SHEET 18 DA20 GLY D 59 VAL D 68 -1 O HIS D 63 N LYS D 301 SHEET 19 DA20 MET D 324 PRO D 326 SHEET 20 DA20 PHE D 201 VAL D 204 -1 O LYS D 202 N LEU D 325 LINK OH TYR A 339 FE HEM A 501 1555 1555 1.89 LINK OH TYR B 339 FE HEM B 501 1555 1555 1.93 LINK OH TYR C 339 FE HEM C 501 1555 1555 1.91 LINK OH TYR D 339 FE HEM D 501 1555 1555 1.77 CISPEP 1 GLU A 384 PRO A 385 0 -3.17 CISPEP 2 GLU B 384 PRO B 385 0 1.57 CISPEP 3 LEU B 478 ASN B 479 0 -14.24 CISPEP 4 GLU C 384 PRO C 385 0 7.59 CISPEP 5 LEU C 478 ASN C 479 0 -11.14 CISPEP 6 GLU D 384 PRO D 385 0 5.61 CISPEP 7 LEU D 478 ASN D 479 0 1.08 SITE 1 AC1 26 ARG A 53 VAL A 54 VAL A 55 HIS A 56 SITE 2 AC1 26 ARG A 93 GLY A 112 SER A 114 GLY A 128 SITE 3 AC1 26 ASN A 129 PHE A 134 PHE A 142 VAL A 198 SITE 4 AC1 26 HIS A 199 PHE A 315 LEU A 331 GLY A 334 SITE 5 AC1 26 ARG A 335 SER A 338 TYR A 339 THR A 342 SITE 6 AC1 26 GLN A 343 ARG A 346 HOH A2038 HOH A2161 SITE 7 AC1 26 HOH A2162 ASP B 46 SITE 1 AC2 27 ASP A 46 ARG B 53 VAL B 54 VAL B 55 SITE 2 AC2 27 HIS B 56 ARG B 93 GLY B 112 PHE B 113 SITE 3 AC2 27 SER B 114 GLY B 128 ASN B 129 PHE B 134 SITE 4 AC2 27 PHE B 142 VAL B 198 HIS B 199 PHE B 315 SITE 5 AC2 27 LEU B 331 GLY B 334 ARG B 335 SER B 338 SITE 6 AC2 27 TYR B 339 THR B 342 GLN B 343 ARG B 346 SITE 7 AC2 27 HOH B2153 HOH B2154 HOH B2155 SITE 1 AC3 26 ARG C 53 VAL C 54 VAL C 55 HIS C 56 SITE 2 AC3 26 ARG C 93 GLY C 112 PHE C 113 SER C 114 SITE 3 AC3 26 GLY C 128 ASN C 129 PHE C 134 PHE C 142 SITE 4 AC3 26 VAL C 198 HIS C 199 PHE C 315 LEU C 331 SITE 5 AC3 26 ARG C 335 SER C 338 TYR C 339 THR C 342 SITE 6 AC3 26 GLN C 343 ARG C 346 HOH C2031 HOH C2108 SITE 7 AC3 26 ILE D 42 ASP D 46 SITE 1 AC4 26 ASP C 46 ARG D 53 VAL D 54 VAL D 55 SITE 2 AC4 26 HIS D 56 ARG D 93 GLY D 112 SER D 114 SITE 3 AC4 26 GLY D 128 ASN D 129 PHE D 134 PHE D 142 SITE 4 AC4 26 VAL D 198 HIS D 199 PHE D 315 LEU D 331 SITE 5 AC4 26 GLY D 334 ARG D 335 SER D 338 TYR D 339 SITE 6 AC4 26 THR D 342 GLN D 343 ARG D 346 HOH D2066 SITE 7 AC4 26 HOH D2076 HOH D2111 CRYST1 94.267 131.935 110.642 90.00 107.61 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010608 0.000000 0.003367 0.00000 SCALE2 0.000000 0.007579 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009483 0.00000