PDB Short entry for 2JFS HEADER HYDROLASE 04-FEB-07 2JFS TITLE CRYSTAL STRUCTURE OF THE PPM SER-THR PHOSPHATASE MSPP FROM TITLE 2 MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH CACODYLATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SER-THR PHOSPHATASE MSPP; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 3 ORGANISM_TAXID: 246196; SOURCE 4 STRAIN: MC2 155; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-28A KEYWDS HYDROLASE, PPM PHOSPHATASE, MANGANESE, CACODYLATE, MYCOBACTERIUM EXPDTA X-RAY DIFFRACTION AUTHOR M.BELLINZONI,A.WEHENKEL,W.SHEPARD,P.M.ALZARI REVDAT 4 13-DEC-23 2JFS 1 LINK REVDAT 3 13-JUL-11 2JFS 1 VERSN REVDAT 2 24-FEB-09 2JFS 1 VERSN REVDAT 1 24-JUL-07 2JFS 0 JRNL AUTH M.BELLINZONI,A.WEHENKEL,W.SHEPARD,P.M.ALZARI JRNL TITL INSIGHTS INTO THE MECHANISM OF PPM SER/THR PHOSPHATASES FROM JRNL TITL 2 THE ATOMIC RESOLUTION STRUCTURES OF A MYCOBACTERIAL ENZYME JRNL REF STRUCTURE V. 15 863 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17637345 JRNL DOI 10.1016/J.STR.2007.06.002 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 45070 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2355 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3260 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 153 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1694 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 240 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : 0.74000 REMARK 3 B33 (A**2) : -0.65000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.062 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.060 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.043 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.930 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1857 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2555 ; 1.459 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 263 ; 5.718 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;33.949 ;23.765 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 281 ;12.767 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;20.961 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 298 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1456 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 896 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1282 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 186 ; 0.179 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 55 ; 0.213 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 30 ; 0.156 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1228 ; 0.995 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1931 ; 1.497 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 684 ; 2.435 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 607 ; 3.859 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 233 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1440 45.8630 16.9740 REMARK 3 T TENSOR REMARK 3 T11: -0.0418 T22: -0.0320 REMARK 3 T33: -0.0514 T12: 0.0127 REMARK 3 T13: 0.0012 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 0.7236 L22: 0.4661 REMARK 3 L33: 2.1465 L12: 0.0325 REMARK 3 L13: -0.2549 L23: 0.1076 REMARK 3 S TENSOR REMARK 3 S11: -0.0321 S12: -0.1050 S13: 0.0023 REMARK 3 S21: 0.0655 S22: -0.0696 S23: -0.0139 REMARK 3 S31: 0.1776 S32: 0.2409 S33: 0.1017 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY REMARK 4 REMARK 4 2JFS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1290030811. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9330 REMARK 200 MONOCHROMATOR : GE(220) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47486 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 25.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2CM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG12K, 85 MM NA CACODYLATE PH REMARK 280 6.5, 120 MM NA ACETATE, 13% GLYCEROL, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.28400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.02950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.89300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.02950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.28400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.89300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD2 PHE A 188 O HOH A 2185 2.04 REMARK 500 O HOH A 2166 O HOH A 2186 2.17 REMARK 500 O1 GOL A 1240 O HOH A 2240 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 223 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 59 79.01 -153.53 REMARK 500 ALA A 190 -15.17 -151.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1234 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 35 OD1 REMARK 620 2 GLY A 36 O 94.8 REMARK 620 3 CAC A1237 O2 94.4 85.8 REMARK 620 4 HOH A2229 O 166.7 82.0 98.3 REMARK 620 5 HOH A2230 O 95.2 167.2 85.5 90.0 REMARK 620 6 HOH A2231 O 81.6 104.9 168.8 86.7 84.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1235 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 35 OD2 REMARK 620 2 ASP A 185 OD1 85.5 REMARK 620 3 ASP A 223 OD2 162.0 86.1 REMARK 620 4 CAC A1237 O1 88.9 90.5 107.1 REMARK 620 5 HOH A2230 O 107.7 165.3 82.9 83.5 REMARK 620 6 HOH A2232 O 82.0 100.4 83.9 165.1 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1236 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 153 ND1 REMARK 620 2 ASP A 185 OD2 93.0 REMARK 620 3 CAC A1237 O1 171.7 91.7 REMARK 620 4 HOH A2233 O 95.5 86.4 91.6 REMARK 620 5 HOH A2234 O 80.8 86.9 92.7 172.2 REMARK 620 6 HOH A2235 O 89.7 175.4 85.2 97.0 89.8 REMARK 620 N 1 2 3 4 5 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A1234 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A1235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A1236 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC A1237 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1238 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1239 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1240 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JFR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PPM SER-THR PHOSPHATASE MSPP FROM REMARK 900 MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH PHOSPHATE AT 0.83 A REMARK 900 RESOLUTION REMARK 900 RELATED ID: 2JFT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PPM SER-THR PHOSPHATASE MSPP FROM REMARK 900 MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH SULFATE REMARK 999 REMARK 999 SEQUENCE REMARK 999 FIRST RESIDUE GLY IS A CLONING ARTIFACT DBREF 2JFS A 0 0 PDB 2JFS 2JFS 0 0 DBREF 2JFS A 1 233 UNP A0QTQ6 A0QTQ6_MYCSM 1 233 SEQRES 1 A 234 GLY MET ALA SER VAL LEU SER ALA ALA THR ALA THR ASP SEQRES 2 A 234 GLN GLY PRO VAL ARG GLU ASN ASN GLN ASP ALA CYS LEU SEQRES 3 A 234 ALA ASP GLY ILE LEU TYR ALA VAL ALA ASP GLY PHE GLY SEQRES 4 A 234 ALA ARG GLY HIS HIS ALA SER ALA THR ALA LEU LYS THR SEQRES 5 A 234 LEU SER ALA GLY PHE ALA ALA ALA PRO ASP ARG ASP GLY SEQRES 6 A 234 LEU LEU GLU ALA VAL GLN GLN ALA ASN LEU ARG VAL PHE SEQRES 7 A 234 GLU LEU LEU GLY ASP GLU PRO THR VAL SER GLY THR THR SEQRES 8 A 234 LEU THR ALA VAL ALA VAL PHE GLU PRO GLY GLN GLY GLY SEQRES 9 A 234 PRO LEU VAL VAL ASN ILE GLY ASP SER PRO LEU TYR ARG SEQRES 10 A 234 ILE ARG ASP GLY HIS MET GLU GLN LEU THR ASP ASP HIS SEQRES 11 A 234 SER VAL ALA GLY GLU LEU VAL ARG MET GLY GLU ILE THR SEQRES 12 A 234 ARG HIS GLU ALA ARG TRP HIS PRO GLN ARG HIS LEU LEU SEQRES 13 A 234 THR ARG ALA LEU GLY ILE GLY PRO HIS ILE GLY PRO ASP SEQRES 14 A 234 VAL PHE GLY ILE ASP CYS GLY PRO GLY ASP ARG LEU LEU SEQRES 15 A 234 ILE SER SER ASP GLY LEU PHE ALA ALA ALA ASP GLU ALA SEQRES 16 A 234 LEU ILE VAL ASP ALA ALA THR SER PRO ASP PRO GLN VAL SEQRES 17 A 234 ALA VAL ARG ARG LEU VAL GLU VAL ALA ASN ASP ALA GLY SEQRES 18 A 234 GLY SER ASP ASN THR THR VAL VAL VAL ILE ASP LEU GLY HET MN A1234 1 HET MN A1235 1 HET MN A1236 1 HET CAC A1237 5 HET GOL A1238 6 HET GOL A1239 6 HET GOL A1240 6 HETNAM MN MANGANESE (II) ION HETNAM CAC CACODYLATE ION HETNAM GOL GLYCEROL HETSYN CAC DIMETHYLARSINATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MN 3(MN 2+) FORMUL 5 CAC C2 H6 AS O2 1- FORMUL 6 GOL 3(C3 H8 O3) FORMUL 9 HOH *240(H2 O) HELIX 1 1 ARG A 40 ALA A 59 1 20 HELIX 2 2 ASP A 61 GLY A 81 1 21 HELIX 3 3 GLU A 98 GLY A 102 5 5 HELIX 4 4 SER A 130 MET A 138 1 9 HELIX 5 5 ASP A 185 ALA A 189 5 5 HELIX 6 6 ASP A 192 THR A 201 1 10 HELIX 7 7 ASP A 204 ALA A 219 1 16 SHEET 1 AA 5 SER A 3 ASP A 12 0 SHEET 2 AA 5 THR A 225 GLY A 233 -1 O THR A 225 N ASP A 12 SHEET 3 AA 5 ARG A 179 SER A 183 -1 O LEU A 180 N ILE A 230 SHEET 4 AA 5 LEU A 114 ARG A 118 -1 O TYR A 115 N LEU A 181 SHEET 5 AA 5 HIS A 121 GLN A 124 -1 O HIS A 121 N ARG A 118 SHEET 1 AB 5 ASP A 22 ASP A 27 0 SHEET 2 AB 5 LEU A 30 PHE A 37 -1 O LEU A 30 N ASP A 27 SHEET 3 AB 5 LEU A 91 ALA A 95 -1 O THR A 92 N VAL A 33 SHEET 4 AB 5 LEU A 105 ILE A 109 -1 O LEU A 105 N ALA A 95 SHEET 5 AB 5 ASP A 168 GLY A 171 -1 O ASP A 168 N ASN A 108 SHEET 1 AC 3 ASP A 22 ASP A 27 0 SHEET 2 AC 3 LEU A 30 PHE A 37 -1 O LEU A 30 N ASP A 27 SHEET 3 AC 3 GLY A 88 THR A 89 -1 O GLY A 88 N PHE A 37 LINK OD1 ASP A 35 MN MN A1234 1555 1555 2.07 LINK OD2 ASP A 35 MN MN A1235 1555 1555 2.21 LINK O GLY A 36 MN MN A1234 1555 1555 2.18 LINK ND1 HIS A 153 MN MN A1236 1555 1555 2.21 LINK OD1 ASP A 185 MN MN A1235 1555 1555 2.09 LINK OD2 ASP A 185 MN MN A1236 1555 1555 2.08 LINK OD2 ASP A 223 MN MN A1235 1555 1555 2.27 LINK MN MN A1234 O2 CAC A1237 1555 1555 2.06 LINK MN MN A1234 O HOH A2229 1555 1555 2.32 LINK MN MN A1234 O HOH A2230 1555 1555 2.29 LINK MN MN A1234 O HOH A2231 1555 1555 2.24 LINK MN MN A1235 O1 CAC A1237 1555 1555 2.24 LINK MN MN A1235 O HOH A2230 1555 1555 2.29 LINK MN MN A1235 O HOH A2232 1555 1555 2.22 LINK MN MN A1236 O1 CAC A1237 1555 1555 2.14 LINK MN MN A1236 O HOH A2233 1555 1555 2.29 LINK MN MN A1236 O HOH A2234 1555 1555 2.26 LINK MN MN A1236 O HOH A2235 1555 1555 2.23 SITE 1 AC1 6 ASP A 35 GLY A 36 CAC A1237 HOH A2229 SITE 2 AC1 6 HOH A2230 HOH A2231 SITE 1 AC2 7 ASP A 35 ASP A 185 ASP A 223 MN A1236 SITE 2 AC2 7 CAC A1237 HOH A2230 HOH A2232 SITE 1 AC3 7 HIS A 153 ASP A 185 MN A1235 CAC A1237 SITE 2 AC3 7 HOH A2233 HOH A2234 HOH A2235 SITE 1 AC4 13 ASP A 35 GLY A 36 PHE A 37 THR A 90 SITE 2 AC4 13 ASP A 185 ASP A 223 MN A1234 MN A1235 SITE 3 AC4 13 MN A1236 GOL A1239 HOH A2230 HOH A2235 SITE 4 AC4 13 HOH A2236 SITE 1 AC5 10 PRO A 15 ASP A 127 ARG A 137 ARG A 157 SITE 2 AC5 10 ASP A 168 ASN A 217 ASP A 218 HOH A2129 SITE 3 AC5 10 HOH A2180 HOH A2237 SITE 1 AC6 6 HIS A 153 LEU A 155 CAC A1237 HOH A2170 SITE 2 AC6 6 HOH A2238 HOH A2239 SITE 1 AC7 8 LEU A 5 SER A 6 THR A 47 LYS A 50 SITE 2 AC7 8 ARG A 75 PRO A 203 ASP A 231 HOH A2240 CRYST1 36.568 65.786 110.059 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027346 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009086 0.00000