PDB Short entry for 2JV2 HEADER UNKNOWN FUNCTION 11-SEP-07 2JV2 TITLE SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF PH1500 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN PH1500; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: CIS-P66, CIS-P68 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 53953; SOURCE 4 GENE: PH1500; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET30B KEYWDS AAA ATPASE NC-DOMAIN-LIKE, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 22 MDLTYP MINIMIZED AVERAGE AUTHOR I.VARNAY,V.TRUFFAULT,M.COLES REVDAT 3 16-MAR-22 2JV2 1 REMARK SEQADV REVDAT 2 24-FEB-09 2JV2 1 VERSN REVDAT 1 25-SEP-07 2JV2 0 SPRSDE 25-SEP-07 2JV2 2I7M JRNL AUTH I.VARNAY,S.DJURANOVIC,V.TRUFFAULT,A.LUPAS,H.KESSLER,M.COLES JRNL TITL THE SOLUTION STRUCTURE OF PH1500-N JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 2.9.4A, X-PLOR NIH 2.9.4A REMARK 3 AUTHORS : BRUNGER, A.T. ET AL. (X-PLOR NIH), BRUNGER, A.T. REMARK 3 ET AL. (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: PROTOCOL INCLUDING CONFORMATIONAL REMARK 3 DATABASE POTENTIAL, BASED ON 748 DISTANCE RESTRAINTS, TALOS REMARK 3 RESTRAINTS FOR 55 RESIDUES, 47 SIDECHAIN CHI1 AND 11 SIDECHAIN REMARK 3 CHI2 DIHEDRAL RESTRAINTS, 34 HBOND RESTRAINTS AND 51 PHI AND 16 REMARK 3 PSI J-COUPLING RESTRAINTS. REMARK 4 REMARK 4 2JV2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000100326. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM HYPOTHETICAL PROTEIN REMARK 210 PH1500, 50 MM PHOSPHATE BUFFER, REMARK 210 50 MM SODIUM CHLORIDE, 90 % H2O, REMARK 210 10 % D2O, 90% H2O/10% D2O; 1 MM REMARK 210 [U-100% 15N] HYPOTHETICAL REMARK 210 PROTEIN PH1500, 50 MM PHOSPHATE REMARK 210 BUFFER, 50 MM SODIUM CHLORIDE, REMARK 210 90 % H2O, 10 % D2O, 90% H2O/10% REMARK 210 D2O; 1 MM [U-100% 13C; U-100% REMARK 210 15N] HYPOTHETICAL PROTEIN PH1500, REMARK 210 50 MM PHOSPHATE BUFFER, 50 MM REMARK 210 SODIUM CHLORIDE, 90 % H2O, 10 % REMARK 210 D2O, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 3D_15N-SEPARATED_ REMARK 210 NOESY; HNHA; HNHB; CNH-NOESY; 3D_ REMARK 210 13C-SEPARATED_NOESY; 3D CBCA(CO) REMARK 210 NH; 3D HNCACB; 3D HNCO; 3D HCCH- REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.6, SPARKY 3.110 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 22 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-22 REMARK 465 RES C SSSEQI REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 MET A 7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 3 THR A 81 -49.62 -148.02 REMARK 500 6 THR A 81 33.22 -147.71 REMARK 500 9 THR A 81 -52.97 -148.30 REMARK 500 11 THR A 81 -47.44 -148.37 REMARK 500 18 VAL A 10 85.84 51.16 REMARK 500 21 THR A 81 32.91 -148.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15465 RELATED DB: BMRB DBREF 2JV2 A 7 83 UNP O59169 O59169_PYRHO 1 77 SEQADV 2JV2 HIS A 1 UNP O59169 EXPRESSION TAG SEQADV 2JV2 HIS A 2 UNP O59169 EXPRESSION TAG SEQADV 2JV2 HIS A 3 UNP O59169 EXPRESSION TAG SEQADV 2JV2 HIS A 4 UNP O59169 EXPRESSION TAG SEQADV 2JV2 HIS A 5 UNP O59169 EXPRESSION TAG SEQADV 2JV2 HIS A 6 UNP O59169 EXPRESSION TAG SEQRES 1 A 83 HIS HIS HIS HIS HIS HIS MET GLU GLY VAL ILE MET SER SEQRES 2 A 83 GLU LEU LYS LEU LYS PRO LEU PRO LYS VAL GLU LEU PRO SEQRES 3 A 83 PRO ASP PHE VAL ASP VAL ILE ARG ILE LYS LEU GLN GLY SEQRES 4 A 83 LYS THR VAL ARG THR GLY ASP VAL ILE GLY ILE SER ILE SEQRES 5 A 83 LEU GLY LYS GLU VAL LYS PHE LYS VAL VAL GLN ALA TYR SEQRES 6 A 83 PRO SER PRO LEU ARG VAL GLU ASP ARG THR LYS ILE THR SEQRES 7 A 83 LEU VAL THR HIS PRO HELIX 1 1 PRO A 26 GLN A 38 1 13 SHEET 1 A 4 VAL A 47 ILE A 52 0 SHEET 2 A 4 LYS A 55 TYR A 65 -1 O LYS A 55 N ILE A 52 SHEET 3 A 4 GLU A 14 PRO A 19 -1 N GLU A 14 O TYR A 65 SHEET 4 A 4 LYS A 76 LEU A 79 1 O LYS A 76 N LEU A 15 SHEET 1 B 2 THR A 41 VAL A 42 0 SHEET 2 B 2 LEU A 69 ARG A 70 -1 O LEU A 69 N VAL A 42 CISPEP 1 TYR A 65 PRO A 66 1 -16.39 CISPEP 2 SER A 67 PRO A 68 1 -16.56 CISPEP 3 TYR A 65 PRO A 66 2 -16.70 CISPEP 4 SER A 67 PRO A 68 2 -15.04 CISPEP 5 TYR A 65 PRO A 66 3 -15.99 CISPEP 6 SER A 67 PRO A 68 3 -24.19 CISPEP 7 TYR A 65 PRO A 66 4 -17.24 CISPEP 8 SER A 67 PRO A 68 4 -17.72 CISPEP 9 TYR A 65 PRO A 66 5 -17.18 CISPEP 10 SER A 67 PRO A 68 5 -17.45 CISPEP 11 TYR A 65 PRO A 66 6 -17.84 CISPEP 12 SER A 67 PRO A 68 6 -17.17 CISPEP 13 TYR A 65 PRO A 66 7 -17.17 CISPEP 14 SER A 67 PRO A 68 7 -20.12 CISPEP 15 TYR A 65 PRO A 66 8 -15.38 CISPEP 16 SER A 67 PRO A 68 8 -21.47 CISPEP 17 TYR A 65 PRO A 66 9 -16.46 CISPEP 18 SER A 67 PRO A 68 9 -24.68 CISPEP 19 TYR A 65 PRO A 66 10 -17.92 CISPEP 20 SER A 67 PRO A 68 10 -19.67 CISPEP 21 TYR A 65 PRO A 66 11 -16.14 CISPEP 22 SER A 67 PRO A 68 11 -15.14 CISPEP 23 TYR A 65 PRO A 66 12 -17.20 CISPEP 24 SER A 67 PRO A 68 12 -23.05 CISPEP 25 TYR A 65 PRO A 66 13 -14.67 CISPEP 26 SER A 67 PRO A 68 13 -14.90 CISPEP 27 TYR A 65 PRO A 66 14 -17.11 CISPEP 28 SER A 67 PRO A 68 14 -25.65 CISPEP 29 TYR A 65 PRO A 66 15 -15.56 CISPEP 30 SER A 67 PRO A 68 15 -22.36 CISPEP 31 TYR A 65 PRO A 66 16 -15.76 CISPEP 32 SER A 67 PRO A 68 16 -24.02 CISPEP 33 TYR A 65 PRO A 66 17 -16.75 CISPEP 34 SER A 67 PRO A 68 17 -25.61 CISPEP 35 TYR A 65 PRO A 66 18 -16.61 CISPEP 36 SER A 67 PRO A 68 18 -16.47 CISPEP 37 TYR A 65 PRO A 66 19 -15.39 CISPEP 38 SER A 67 PRO A 68 19 -23.37 CISPEP 39 TYR A 65 PRO A 66 20 -16.80 CISPEP 40 SER A 67 PRO A 68 20 -24.94 CISPEP 41 TYR A 65 PRO A 66 21 -17.91 CISPEP 42 SER A 67 PRO A 68 21 -21.02 CISPEP 43 TYR A 65 PRO A 66 22 -17.40 CISPEP 44 SER A 67 PRO A 68 22 -26.11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000