PDB Short entry for 2JWM
HEADER    PLANT PROTEIN                           16-OCT-07   2JWM              
TITLE     NMR SPATIAL SRTUCTURE OF TERNARY COMPLEX KALATA B7/MN2+/DPC MICELLE   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: KALATA-B7;                                                 
COMPND   3 CHAIN: A                                                             
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: OLDENLANDIA AFFINIS;                            
SOURCE   3 ORGANISM_TAXID: 60225                                                
KEYWDS    CYCLOTIDE, CYCTINE KNOT, DIVALENT CATION-BINDING SITE, CYTOLYSIS,     
KEYWDS   2 HEMOLYSIS, KNOTTIN, PLANT DEFENSE, PLANT PROTEIN                     
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    K.D.NADEZHDIN,Z.O.SHENKAREV,L.SKJELDAL,A.S.ARSENIEV                   
REVDAT   4   16-MAR-22 2JWM    1       REMARK                                   
REVDAT   3   24-FEB-09 2JWM    1       VERSN                                    
REVDAT   2   20-MAY-08 2JWM    1       JRNL                                     
REVDAT   1   11-MAR-08 2JWM    0                                                
JRNL        AUTH   Z.O.SHENKAREV,K.D.NADEZHDIN,E.N.LYUKMANOVA,V.A.SOBOL,        
JRNL        AUTH 2 L.SKJELDAL,A.S.ARSENIEV                                      
JRNL        TITL   DIVALENT CATION COORDINATION AND MODE OF MEMBRANE            
JRNL        TITL 2 INTERACTION IN CYCLOTIDES: NMR SPATIAL STRUCTURE OF TERNARY  
JRNL        TITL 3 COMPLEX KALATA B7/MN(2+)/DPC MICELLE                         
JRNL        REF    J.INORG.BIOCHEM.              V. 102  1246 2008              
JRNL        REFN                   ISSN 0162-0134                               
JRNL        PMID   18295894                                                     
JRNL        DOI    10.1016/J.JINORGBIO.2008.01.018                              
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XEASY, CYANA 1.1                                     
REMARK   3   AUTHORS     : BARTELS ET AL. (XEASY), GUNTERT, MUMENTHALER,        
REMARK   3                 WUTHRICH (CYANA)                                     
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2JWM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-OCT-07.                  
REMARK 100 THE DEPOSITION ID IS D_1000100382.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 303; 313; 313                      
REMARK 210  PH                             : 2.6; 2.6; 5.0                      
REMARK 210  IONIC STRENGTH                 : 0; NULL; NULL                      
REMARK 210  PRESSURE                       : AMBIENT; NULL; NULL                
REMARK 210  SAMPLE CONTENTS                : 1.6MM KALATA B7, 90% H2O/10%       
REMARK 210                                   D2O; 0.6MM KALATA B7, 90% H2O/10%  
REMARK 210                                   D2O                                
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-1H TOCSY; 2D DQF-COSY; 2D    
REMARK 210                                   1H-1H NOESY; 1D 1H; 1D INVERTION-  
REMARK 210                                   RECOVERY                           
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ; 500 MHZ                   
REMARK 210  SPECTROMETER MODEL             : UNITY; DRX                         
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN; BRUKER                     
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : XEASY, VNMR, XWINNMR, CYANA 1.1,   
REMARK 210                                   MOLMOL                             
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION                    
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   N    CYS A     1     C    VAL A    29              1.32            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 TRP A  19      145.33    -34.78                                   
REMARK 500  2 TRP A  19      145.03    -34.60                                   
REMARK 500  3 TRP A  19      145.20    -34.94                                   
REMARK 500  4 TRP A  19      146.17    -34.67                                   
REMARK 500  5 TRP A  19      145.25    -34.69                                   
REMARK 500  6 TRP A  19      144.87    -34.79                                   
REMARK 500  7 TRP A  19      146.11    -35.10                                   
REMARK 500  8 TRP A  19      145.71    -34.48                                   
REMARK 500  9 CYS A   5       43.14   -140.61                                   
REMARK 500  9 TRP A  19      145.24    -34.52                                   
REMARK 500 10 TRP A  19      145.19    -34.48                                   
REMARK 500 10 ASN A  25       21.93     80.66                                   
REMARK 500 11 TRP A  19      145.82    -34.89                                   
REMARK 500 12 TRP A  19      146.80    -36.25                                   
REMARK 500 12 ASN A  25       21.34     80.78                                   
REMARK 500 13 TRP A  19      145.40    -34.69                                   
REMARK 500 14 TRP A  19      145.31    -34.83                                   
REMARK 500 15 TRP A  19      145.28    -34.57                                   
REMARK 500 16 TRP A  19      145.04    -34.50                                   
REMARK 500 17 TRP A  19      145.69    -34.82                                   
REMARK 500 18 TRP A  19      145.70    -34.64                                   
REMARK 500 19 TRP A  19      145.68    -34.41                                   
REMARK 500 20 TRP A  19      145.96    -34.23                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  2JWM A    1    25  UNP    P58457   KAB7_OLDAF      80    104             
DBREF  2JWM A   26    29  UNP    P58457   KAB7_OLDAF      76     79             
SEQRES   1 A   29  CYS GLY GLU THR CYS THR LEU GLY THR CYS TYR THR GLN          
SEQRES   2 A   29  GLY CYS THR CYS SER TRP PRO ILE CYS LYS ARG ASN GLY          
SEQRES   3 A   29  LEU PRO VAL                                                  
SHEET    1   A 2 THR A  16  SER A  18  0                                        
SHEET    2   A 2 ILE A  21  LYS A  23 -1  O  LYS A  23   N  THR A  16           
SSBOND   1 CYS A    1    CYS A   15                          1555   1555  2.00  
SSBOND   2 CYS A    5    CYS A   17                          1555   1555  2.08  
SSBOND   3 CYS A   10    CYS A   22                          1555   1555  1.91  
CISPEP   1 TRP A   19    PRO A   20          1        -8.68                     
CISPEP   2 TRP A   19    PRO A   20          2        -8.80                     
CISPEP   3 TRP A   19    PRO A   20          3        -8.80                     
CISPEP   4 TRP A   19    PRO A   20          4        -8.73                     
CISPEP   5 TRP A   19    PRO A   20          5        -8.86                     
CISPEP   6 TRP A   19    PRO A   20          6        -8.80                     
CISPEP   7 TRP A   19    PRO A   20          7        -8.86                     
CISPEP   8 TRP A   19    PRO A   20          8        -8.94                     
CISPEP   9 TRP A   19    PRO A   20          9        -8.71                     
CISPEP  10 TRP A   19    PRO A   20         10        -8.91                     
CISPEP  11 TRP A   19    PRO A   20         11        -8.76                     
CISPEP  12 TRP A   19    PRO A   20         12        -9.09                     
CISPEP  13 TRP A   19    PRO A   20         13        -8.95                     
CISPEP  14 TRP A   19    PRO A   20         14        -8.79                     
CISPEP  15 TRP A   19    PRO A   20         15        -8.73                     
CISPEP  16 TRP A   19    PRO A   20         16        -8.68                     
CISPEP  17 TRP A   19    PRO A   20         17        -8.79                     
CISPEP  18 TRP A   19    PRO A   20         18        -9.06                     
CISPEP  19 TRP A   19    PRO A   20         19        -8.94                     
CISPEP  20 TRP A   19    PRO A   20         20        -8.72                     
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000