PDB Short entry for 2K8O HEADER CELL ADHESION 17-SEP-08 2K8O TITLE SOLUTION STRUCTURE OF INTEGRIN ALPHA L COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN ALPHA-L; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CYTOPLASMIC; COMPND 5 SYNONYM: LEUKOCYTE ADHESION GLYCOPROTEIN LFA-1 ALPHA CHAIN, LFA-1A, COMPND 6 LEUKOCYTE FUNCTION-ASSOCIATED MOLECULE 1 ALPHA CHAIN, CD11 ANTIGEN- COMPND 7 LIKE FAMILY MEMBER A; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET31B+ KEYWDS INTEGRIN, ALPHA L, BETA 2, BETA 3, ALTERNATIVE SPLICING, CALCIUM, KEYWDS 2 CELL ADHESION, GLYCOPROTEIN, MAGNESIUM, MEMBRANE, POLYMORPHISM, KEYWDS 3 RECEPTOR, TRANSMEMBRANE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR A.BHUNIA,S.BHATTACHARJYA,S.TAN REVDAT 4 10-NOV-21 2K8O 1 SEQADV REVDAT 3 24-OCT-18 2K8O 1 SOURCE REMARK REVDAT 2 10-FEB-09 2K8O 1 JRNL REVDAT 1 09-DEC-08 2K8O 0 JRNL AUTH A.BHUNIA,X.-Y.TANG,H.MOHANRAM,S.-M.TAN,S.BHATTACHARJYA JRNL TITL NMR SOLUTION CONFORMATIONS AND INTERACTIONS OF INTEGRIN JRNL TITL 2 {ALPHA}L{BETA}2 CYTOPLASMIC TAILS JRNL REF J.BIOL.CHEM. V. 284 3873 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19073598 JRNL DOI 10.1074/JBC.M807236200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUNTERT, BRAUN AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K8O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000100815. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.2 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-15N;U-13C] AL, % NACL, REMARK 210 % TCEP, % PHOSPHATE BUFFER, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HN(CO)CA; 3D 1H- REMARK 210 15N TOCSY; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 15 -18.29 -49.36 REMARK 500 1 ARG A 18 29.20 -153.27 REMARK 500 1 VAL A 20 -62.36 -91.47 REMARK 500 1 ASN A 22 92.76 40.02 REMARK 500 1 PRO A 25 9.42 -69.80 REMARK 500 2 VAL A 3 -38.65 -142.25 REMARK 500 2 GLU A 15 -18.81 -48.29 REMARK 500 2 ARG A 18 23.11 -159.30 REMARK 500 2 ASN A 22 84.23 34.76 REMARK 500 3 LYS A 2 -170.88 63.91 REMARK 500 3 GLU A 15 -16.78 -49.94 REMARK 500 3 ARG A 18 31.84 -145.95 REMARK 500 3 VAL A 20 -64.86 -105.20 REMARK 500 3 ASN A 22 131.75 -29.09 REMARK 500 4 GLU A 15 -17.60 -49.89 REMARK 500 4 ARG A 18 23.55 -161.94 REMARK 500 4 VAL A 20 -65.44 -94.54 REMARK 500 4 ASN A 22 84.31 35.82 REMARK 500 4 PRO A 25 0.61 -69.81 REMARK 500 5 GLU A 15 -19.08 -47.63 REMARK 500 5 ARG A 18 28.09 -154.37 REMARK 500 5 VAL A 20 -64.23 -107.78 REMARK 500 5 ASN A 22 123.38 -29.25 REMARK 500 6 GLU A 15 -18.63 -49.14 REMARK 500 6 ASN A 22 86.21 39.93 REMARK 500 6 PRO A 25 13.44 -69.74 REMARK 500 7 LYS A 2 -66.37 -131.97 REMARK 500 7 VAL A 3 -65.66 70.69 REMARK 500 7 ARG A 18 -126.67 33.28 REMARK 500 7 ASN A 22 85.17 30.96 REMARK 500 7 PRO A 25 9.08 -69.73 REMARK 500 8 LYS A 2 -89.31 59.03 REMARK 500 8 VAL A 3 -71.34 65.73 REMARK 500 8 GLU A 15 -18.62 -47.80 REMARK 500 8 ARG A 18 14.64 -145.97 REMARK 500 8 ASN A 22 88.39 28.63 REMARK 500 8 PRO A 25 22.21 -69.79 REMARK 500 9 VAL A 3 -54.12 76.98 REMARK 500 9 ARG A 18 -90.15 -154.34 REMARK 500 9 ASN A 22 87.36 22.60 REMARK 500 9 ILE A 24 -61.38 -162.35 REMARK 500 10 LYS A 2 -85.71 -179.11 REMARK 500 10 VAL A 3 -72.90 62.00 REMARK 500 10 ARG A 18 -75.07 -158.18 REMARK 500 10 ASN A 22 88.14 36.58 REMARK 500 10 PRO A 25 11.57 -69.68 REMARK 500 REMARK 500 REMARK: NULL DBREF 2K8O A 2 59 UNP P20701 ITAL_HUMAN 1113 1170 SEQADV 2K8O LEU A 1 UNP P20701 EXPRESSION TAG SEQADV 2K8O ILE A 14 UNP P20701 MET 1125 ENGINEERED MUTATION SEQADV 2K8O GLY A 60 UNP P20701 EXPRESSION TAG SEQRES 1 A 60 LEU LYS VAL GLY PHE PHE LYS ARG ASN LEU LYS GLU LYS SEQRES 2 A 60 ILE GLU ALA GLY ARG GLY VAL PRO ASN GLY ILE PRO ALA SEQRES 3 A 60 GLU ASP SER GLU GLN LEU ALA SER GLY GLN GLU ALA GLY SEQRES 4 A 60 ASP PRO GLY CYS LEU LYS PRO LEU HIS GLU LYS ASP SER SEQRES 5 A 60 GLU SER GLY GLY GLY LYS ASP GLY HELIX 1 1 PHE A 6 LYS A 13 1 8 HELIX 2 2 PRO A 25 GLU A 37 1 13 HELIX 3 3 PRO A 41 CYS A 43 5 3 HELIX 4 4 LEU A 44 GLY A 55 1 12 HELIX 5 5 GLY A 55 GLY A 60 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000