PDB Short entry for 2LA0 HEADER ANTIMICROBIAL PROTEIN 27-FEB-11 2LA0 TITLE TRN- PEPTIDE OF THE TWO-COMPONENT BACTERIOCIN THURICIN CD COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 20-49 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS 95/8201; SOURCE 3 ORGANISM_TAXID: 526979; SOURCE 4 STRAIN: DPC 6431 KEYWDS THIOETHER BRIDGES, HELICAL LOOPS, CROSSLINKED, POST-TRANSLATIONALLY KEYWDS 2 MODIFIED, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.S.SIT,R.T.MCKAY,C.HILL,R.P.ROSS,J.C.VEDERAS REVDAT 2 22-AUG-18 2LA0 1 SEQADV REVDAT 1 11-JAN-12 2LA0 0 JRNL AUTH C.S.SIT,R.T.MCKAY,C.HILL,R.P.ROSS,J.C.VEDERAS JRNL TITL THE 3D STRUCTURE OF THURICIN CD, A TWO-COMPONENT BACTERIOCIN JRNL TITL 2 WITH CYSTEINE SULFUR TO ALPHA-CARBON CROSS-LINKS. JRNL REF J.AM.CHEM.SOC. V. 133 7680 2011 JRNL REFN ISSN 0002-7863 JRNL PMID 21526839 JRNL DOI 10.1021/JA201802F REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LA0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000102143. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-99% 13C; U-99% 15N] REMARK 210 TRNB, 100 UM DSS, CD3OH REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-13C HSQC ALIPHATIC; 3D REMARK 210 HNHA; 3D CBCA(CO)NH; 3D HCCH- REMARK 210 TOCSY; 3D HNCO; 3D HNCACB; 3D 1H- REMARK 210 13C NOESY; 3D 1H-15N NOESY; 3D REMARK 210 1H-15N TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 3 ALA A 26 -74.89 -62.59 REMARK 500 3 SER A 27 125.22 178.09 REMARK 500 4 SER A 27 105.67 178.14 REMARK 500 5 ALA A 26 -72.73 -61.10 REMARK 500 5 SER A 27 128.05 178.08 REMARK 500 6 CYS A 9 -73.09 -51.83 REMARK 500 6 ALA A 26 -70.30 -59.57 REMARK 500 6 SER A 27 105.28 178.09 REMARK 500 7 SER A 27 105.46 178.12 REMARK 500 8 ALA A 26 -76.39 -62.68 REMARK 500 8 SER A 27 90.99 178.10 REMARK 500 9 CYS A 9 -74.50 -51.78 REMARK 500 9 ALA A 26 -71.67 -60.96 REMARK 500 9 SER A 27 102.62 178.11 REMARK 500 10 CYS A 9 -74.61 -51.65 REMARK 500 11 ALA A 25 83.89 -69.62 REMARK 500 11 ALA A 26 -77.95 -62.55 REMARK 500 11 SER A 27 104.46 177.22 REMARK 500 12 ALA A 26 -75.73 -59.12 REMARK 500 12 SER A 27 172.65 178.05 REMARK 500 13 CYS A 9 -71.99 -51.87 REMARK 500 13 SER A 27 91.08 178.12 REMARK 500 15 THR A 11 87.64 -63.32 REMARK 500 15 ALA A 26 -71.07 -59.52 REMARK 500 15 SER A 27 111.41 178.03 REMARK 500 16 ALA A 26 -71.74 -61.47 REMARK 500 16 SER A 27 80.80 178.13 REMARK 500 17 CYS A 9 -74.57 -50.14 REMARK 500 17 SER A 27 -70.46 -55.29 REMARK 500 18 THR A 11 143.62 -179.00 REMARK 500 20 ALA A 26 -72.28 -62.75 REMARK 500 20 SER A 27 102.86 178.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTY A 28 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17495 RELATED DB: BMRB REMARK 900 RELATED ID: 2L9X RELATED DB: PDB DBREF 2LA0 A 1 30 UNP C2TQ79 C2TQ79_BACCE 20 49 SEQADV 2LA0 DTY A 28 UNP C2TQ79 TYR 47 VARIANT SEQRES 1 A 30 GLY TRP VAL ALA CYS VAL GLY ALA CYS GLY THR VAL CYS SEQRES 2 A 30 LEU ALA SER GLY GLY VAL GLY THR GLU PHE ALA ALA ALA SEQRES 3 A 30 SER DTY PHE LEU HET DTY A 28 20 HETNAM DTY D-TYROSINE FORMUL 1 DTY C9 H11 N O3 HELIX 1 1 GLY A 1 SER A 16 1 16 HELIX 2 2 GLY A 20 ALA A 25 1 6 HELIX 3 3 ALA A 25 LEU A 30 1 6 LINK C SER A 27 N DTY A 28 1555 1555 1.33 LINK C DTY A 28 N PHE A 29 1555 1555 1.33 LINK SG CYS A 5 CA DTY A 28 1555 1555 1.96 LINK SG CYS A 9 CA ALA A 25 1555 1555 2.00 LINK SG CYS A 13 CA THR A 21 1555 1555 2.03 SITE 1 AC1 6 CYS A 5 ALA A 25 ALA A 26 SER A 27 SITE 2 AC1 6 PHE A 29 LEU A 30 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000