PDB Short entry for 2LGT HEADER TRANSLATION 02-AUG-11 2LGT TITLE BACKBONE 1H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR QFM(Y)F COMPND MOL_ID: 1; COMPND 2 MOLECULE: EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-142; COMPND 5 SYNONYM: EUKARYOTIC RELEASE FACTOR 1, ERF1, PROTEIN CL1, TB3-1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ETF1, ERF1, RF1, SUP45L1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS TRANSLATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.E.WONG,Y.LI,S.PILLAY,K.PERVUSHIN REVDAT 1 14-MAR-12 2LGT 0 JRNL AUTH L.E.WONG,Y.LI,S.PILLAY,L.FROLOVA,K.PERVUSHIN JRNL TITL SELECTIVITY OF STOP CODON RECOGNITION IN TRANSLATION JRNL TITL 2 TERMINATION IS MODULATED BY MULTIPLE CONFORMATIONS OF GTS JRNL TITL 3 LOOP IN ERF1 JRNL REF NUCLEIC ACIDS RES. 2012 JRNL REFN ESSN 1362-4962 JRNL PMID 22383581 JRNL DOI 10.1093/NAR/GKS192 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, REMARK 3 JIANG,KUSZEWSKI,NILGES,PANNU,READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LGT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-AUG-11. REMARK 100 THE RCSB ID CODE IS RCSB102374. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.1MM DSS-1, 100MM POTASSIUM REMARK 210 CHLORIDE-2, 20MM MES-3, 5% [U-2H] REMARK 210 D2O-4, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HNCACB; 3D HNCO; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 3 -74.33 -91.22 REMARK 500 1 ASN A 30 -176.41 -58.61 REMARK 500 1 TYR A 85 69.11 -102.57 REMARK 500 1 ASP A 113 117.25 -163.69 REMARK 500 1 PRO A 116 -169.96 -69.77 REMARK 500 1 GLN A 122 -177.70 -174.67 REMARK 500 1 LYS A 130 137.36 178.43 REMARK 500 2 ASN A 30 -174.16 -59.29 REMARK 500 2 ASP A 113 118.46 -160.59 REMARK 500 2 PRO A 116 -168.65 -69.76 REMARK 500 2 GLN A 122 -177.36 -174.55 REMARK 500 2 LYS A 130 145.74 177.62 REMARK 500 3 ASN A 30 -178.70 -57.95 REMARK 500 3 ASP A 113 117.67 -160.71 REMARK 500 3 PRO A 116 -169.45 -69.74 REMARK 500 3 GLN A 122 -175.04 178.76 REMARK 500 3 LYS A 130 132.30 175.63 REMARK 500 4 ASN A 30 -171.32 -59.61 REMARK 500 4 ASP A 113 118.68 -160.88 REMARK 500 4 PRO A 116 -169.76 -69.72 REMARK 500 4 ASN A 121 -73.95 -48.20 REMARK 500 4 LYS A 130 132.80 174.66 REMARK 500 5 ASP A 3 -73.93 -122.77 REMARK 500 5 ASN A 30 -175.20 -58.56 REMARK 500 5 PRO A 116 -170.55 -69.78 REMARK 500 5 ASN A 121 -77.75 -49.06 REMARK 500 5 LYS A 130 140.61 177.45 REMARK 500 6 ASN A 30 -175.35 -59.49 REMARK 500 6 PRO A 116 -168.89 -69.72 REMARK 500 6 GLN A 122 -177.11 -174.47 REMARK 500 6 LYS A 130 149.39 177.29 REMARK 500 6 THR A 133 85.24 -150.84 REMARK 500 7 ASP A 3 114.34 -170.14 REMARK 500 7 ASN A 30 -173.92 -58.87 REMARK 500 7 TYR A 85 69.08 -100.19 REMARK 500 7 ASP A 113 118.78 -163.09 REMARK 500 7 PRO A 116 -168.67 -69.78 REMARK 500 7 ASN A 121 -77.50 -49.38 REMARK 500 7 LYS A 130 139.74 178.43 REMARK 500 8 ASN A 30 -169.39 -60.43 REMARK 500 8 ASP A 113 117.28 -161.92 REMARK 500 8 PRO A 116 -168.85 -69.80 REMARK 500 8 GLN A 122 -177.68 -174.59 REMARK 500 8 LYS A 130 121.68 177.84 REMARK 500 9 ASN A 30 -169.70 -63.49 REMARK 500 9 PRO A 116 -168.15 -69.73 REMARK 500 9 ASN A 121 -71.60 -50.04 REMARK 500 9 LYS A 130 121.04 178.31 REMARK 500 10 ASP A 3 -57.09 -131.87 REMARK 500 10 ASN A 30 -174.32 -59.42 REMARK 500 REMARK 500 THIS ENTRY HAS 111 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17822 RELATED DB: BMRB DBREF 2LGT A 1 142 UNP P62495 ERF1_HUMAN 1 142 SEQADV 2LGT GLN A 122 UNP P62495 THR 122 ENGINEERED MUTATION SEQADV 2LGT PHE A 123 UNP P62495 SER 123 ENGINEERED MUTATION SEQADV 2LGT MET A 124 UNP P62495 LEU 124 ENGINEERED MUTATION SEQADV 2LGT PHE A 126 UNP P62495 LEU 126 ENGINEERED MUTATION SEQADV 2LGT LEU A 143 UNP P62495 EXPRESSION TAG SEQADV 2LGT GLU A 144 UNP P62495 EXPRESSION TAG SEQRES 1 A 144 MET ALA ASP ASP PRO SER ALA ALA ASP ARG ASN VAL GLU SEQRES 2 A 144 ILE TRP LYS ILE LYS LYS LEU ILE LYS SER LEU GLU ALA SEQRES 3 A 144 ALA ARG GLY ASN GLY THR SER MET ILE SER LEU ILE ILE SEQRES 4 A 144 PRO PRO LYS ASP GLN ILE SER ARG VAL ALA LYS MET LEU SEQRES 5 A 144 ALA ASP GLU PHE GLY THR ALA SER ASN ILE LYS SER ARG SEQRES 6 A 144 VAL ASN ARG LEU SER VAL LEU GLY ALA ILE THR SER VAL SEQRES 7 A 144 GLN GLN ARG LEU LYS LEU TYR ASN LYS VAL PRO PRO ASN SEQRES 8 A 144 GLY LEU VAL VAL TYR CYS GLY THR ILE VAL THR GLU GLU SEQRES 9 A 144 GLY LYS GLU LYS LYS VAL ASN ILE ASP PHE GLU PRO PHE SEQRES 10 A 144 LYS PRO ILE ASN GLN PHE MET TYR PHE CYS ASP ASN LYS SEQRES 11 A 144 PHE HIS THR GLU ALA LEU THR ALA LEU LEU SER ASP LEU SEQRES 12 A 144 GLU HELIX 1 1 ALA A 7 GLU A 25 1 19 HELIX 2 2 GLN A 44 SER A 60 1 17 HELIX 3 3 SER A 64 LYS A 83 1 20 HELIX 4 4 THR A 133 GLU A 144 1 12 SHEET 1 A 3 ILE A 35 ILE A 39 0 SHEET 2 A 3 LEU A 93 VAL A 101 -1 O VAL A 95 N LEU A 37 SHEET 3 A 3 GLU A 107 PHE A 114 -1 O VAL A 110 N GLY A 98 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000