PDB Short entry for 2LJ2 HEADER MEMBRANE PROTEIN 03-SEP-11 2LJ2 TITLE INTEGRAL MEMBRANE CORE DOMAIN OF THE MERCURY TRANSPORTER MERF IN LIPID TITLE 2 BILAYER MEMBRANES COMPND MOL_ID: 1; COMPND 2 MOLECULE: MERF; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 13-70; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MORGANELLA MORGANII; SOURCE 3 ORGANISM_TAXID: 582; SOURCE 4 GENE: MERF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C43; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS MEMBRANE PROTEIN, MERCURY TRANSPORTER, LIPID BILAYERS EXPDTA SOLID-STATE NMR NUMMDL 10 AUTHOR B.B.DAS,H.J.NOTHNAGEL,G.J.LU,W.SON,S.PARK,Y.B.TIAN,F.M.MARASSI, AUTHOR 2 S.J.OPELLA REVDAT 3 14-JUN-23 2LJ2 1 REMARK SEQADV REVDAT 2 15-FEB-12 2LJ2 1 JRNL REVDAT 1 18-JAN-12 2LJ2 0 JRNL AUTH B.B.DAS,H.J.NOTHNAGEL,G.J.LU,W.S.SON,Y.TIAN,F.M.MARASSI, JRNL AUTH 2 S.J.OPELLA JRNL TITL STRUCTURE DETERMINATION OF A MEMBRANE PROTEIN IN JRNL TITL 2 PROTEOLIPOSOMES. JRNL REF J.AM.CHEM.SOC. V. 134 2047 2012 JRNL REFN ISSN 0002-7863 JRNL PMID 22217388 JRNL DOI 10.1021/JA209464F REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SPARKY, X-PLOR NIH REMARK 3 AUTHORS : GODDARD (SPARKY), SCHWIETERS, KUSZEWSKI, TJANDRA REMARK 3 AND CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ANI COORDINATES HAVE BEEN INCLUDED REMARK 3 IN THE RESTRAINT FILE. THE ANI Z AXIS SPECIFIES THE DIRECTION OF REMARK 3 THE NORMAL TO THE PLANE OF THE LIPID BILAYER MEMBRANE. REMARK 4 REMARK 4 2LJ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000102442. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.1 REMARK 210 IONIC STRENGTH : 10 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 3.6 MG [U-100% 13C; U-100% 15N] REMARK 210 MERFT, H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NCACX; SLF; PDSD REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR NIH, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: DATA WERE COLLECTED ON A SINGLE SAMPLE. EXPERIMENTS ARE REMARK 210 DESCRIBED IN RELATED PUBLICATION. REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 38 H GLY A 41 1.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 68 65.62 31.37 REMARK 500 1 ASP A 69 -80.95 54.43 REMARK 500 1 ALA A 70 -148.75 79.40 REMARK 500 2 ALA A 70 92.13 53.19 REMARK 500 3 ASP A 69 67.04 -177.04 REMARK 500 4 ALA A 68 39.64 -80.40 REMARK 500 4 ASP A 69 -176.64 -171.52 REMARK 500 4 ALA A 70 -81.84 63.62 REMARK 500 4 SER A 71 18.73 43.05 REMARK 500 5 ALA A 68 -40.92 64.91 REMARK 500 5 ASP A 69 -68.90 176.60 REMARK 500 6 ALA A 68 46.37 -70.65 REMARK 500 6 ASP A 69 -109.44 -79.61 REMARK 500 6 ALA A 70 -57.91 67.29 REMARK 500 7 ALA A 68 86.19 35.10 REMARK 500 7 ALA A 70 33.37 -86.67 REMARK 500 8 ALA A 68 43.94 -75.99 REMARK 500 8 ASP A 69 88.79 48.06 REMARK 500 9 ALA A 68 -39.38 67.28 REMARK 500 9 SER A 71 96.44 44.23 REMARK 500 10 ALA A 68 43.66 -74.65 REMARK 500 10 ASP A 69 81.71 55.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2H3O RELATED DB: PDB REMARK 900 RELATED ID: 1WAZ RELATED DB: PDB REMARK 900 RELATED ID: 17914 RELATED DB: BMRB DBREF 2LJ2 A 13 72 UNP Q56446 Q56446_MORMO 13 72 SEQADV 2LJ2 SER A 21 UNP Q56446 CYS 21 CONFLICT SEQADV 2LJ2 SER A 22 UNP Q56446 CYS 22 CONFLICT SEQADV 2LJ2 SER A 71 UNP Q56446 CYS 71 CONFLICT SEQADV 2LJ2 SER A 72 UNP Q56446 CYS 72 CONFLICT SEQRES 1 A 60 ILE GLY THR THR LEU VAL ALA LEU SER SER PHE THR PRO SEQRES 2 A 60 VAL LEU VAL ILE LEU LEU GLY VAL VAL GLY LEU SER ALA SEQRES 3 A 60 LEU THR GLY TYR LEU ASP TYR VAL LEU LEU PRO ALA LEU SEQRES 4 A 60 ALA ILE PHE ILE GLY LEU THR ILE TYR ALA ILE GLN ARG SEQRES 5 A 60 LYS ARG GLN ALA ASP ALA SER SER HELIX 1 1 ILE A 13 SER A 21 1 9 HELIX 2 2 SER A 22 ALA A 38 1 17 HELIX 3 3 LEU A 39 GLY A 41 5 3 HELIX 4 4 LEU A 51 ALA A 68 1 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000