PDB Short entry for 2LLT HEADER METAL BINDING PROTEIN 17-NOV-11 2LLT TITLE POST-TRANSLATIONAL S-NITROSYLATION IS AN ENDOGENOUS FACTOR FINE-TUNING TITLE 2 HUMAN S100A1 PROTEIN PROPERTIES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN S100-A1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: S-100 PROTEIN ALPHA CHAIN, S-100 PROTEIN SUBUNIT ALPHA, S100 COMPND 5 CALCIUM-BINDING PROTEIN A1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: S100A1, S100A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-30A KEYWDS CA-BINDING PROTEINS, S-NITROSYLATION, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.LENARCIC ZIVKOVIC,M.ZAREBA-KOZIOL,L.ZHUKOVA,J.POZNANSKI,I.ZHUKOV, AUTHOR 2 A.WYSLOUCH-CIESZYNSKA REVDAT 3 14-JUN-23 2LLT 1 REMARK LINK REVDAT 2 12-DEC-12 2LLT 1 JRNL REVDAT 1 26-SEP-12 2LLT 0 JRNL AUTH M.LENARCIC ZIVKOVIC,M.ZAREBA-KOZIOL,L.ZHUKOVA,J.POZNANSKI, JRNL AUTH 2 I.ZHUKOV,A.WYSLOUCH-CIESZYNSKA JRNL TITL POST-TRANSLATIONAL S-NITROSYLATION IS AN ENDOGENOUS FACTOR JRNL TITL 2 FINE TUNING THE PROPERTIES OF HUMAN S100A1 PROTEIN. JRNL REF J.BIOL.CHEM. V. 287 40457 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22989881 JRNL DOI 10.1074/JBC.M112.418392 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, X-PLOR NIH REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LLT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000102539. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8 MM [U-98% 13C; U-98% 15N] REMARK 210 PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HN(CO)CA; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HBHA(CO)NH; 3D 1H- REMARK 210 15N NOESY; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D HCCH-TOCSY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : UNIFORM NMR SYSTEM REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, CYANA 3.0, X-PLOR NIH REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 88 -15.81 -48.75 REMARK 500 1 SER B 2 -177.77 -69.42 REMARK 500 1 PHE B 88 -19.31 -40.71 REMARK 500 2 THR A 39 -60.66 -100.31 REMARK 500 2 LYS A 49 -45.12 -138.26 REMARK 500 2 LYS B 49 -47.94 -132.60 REMARK 500 2 ALA B 84 0.72 -65.24 REMARK 500 3 LYS A 49 -53.33 -129.53 REMARK 500 3 LYS B 49 -48.58 -131.77 REMARK 500 3 ALA B 84 0.52 -67.68 REMARK 500 4 ALA A 47 30.39 -98.44 REMARK 500 4 LYS A 49 -47.25 -136.87 REMARK 500 4 ALA A 84 0.68 -63.39 REMARK 500 4 LYS B 49 -54.66 -135.66 REMARK 500 6 LYS A 49 -48.90 -133.62 REMARK 500 6 ALA A 84 -4.93 -58.73 REMARK 500 6 LYS B 49 -42.94 -135.36 REMARK 500 6 ASN B 87 -16.19 -42.43 REMARK 500 6 PHE B 88 -15.72 -40.65 REMARK 500 7 GLU A 22 41.84 -96.06 REMARK 500 7 LYS A 49 -50.23 -126.40 REMARK 500 7 ALA A 84 0.46 -66.09 REMARK 500 7 LYS B 49 -61.16 -136.31 REMARK 500 8 ALA A 47 42.22 -105.65 REMARK 500 8 LYS A 49 -53.95 -127.88 REMARK 500 8 LYS B 49 -43.55 -132.51 REMARK 500 8 PHE B 88 -15.95 -42.23 REMARK 500 9 GLU A 22 41.97 -109.86 REMARK 500 9 LYS A 49 -53.95 -132.45 REMARK 500 9 ALA A 84 0.75 -65.01 REMARK 500 9 THR B 39 -60.72 -105.77 REMARK 500 9 ALA B 47 30.49 -96.12 REMARK 500 9 LYS B 49 -52.18 -133.11 REMARK 500 10 GLU B 22 41.89 -95.87 REMARK 500 10 LYS B 49 -50.83 -130.13 REMARK 500 10 ALA B 84 0.59 -66.70 REMARK 500 11 LYS A 49 -50.50 -126.99 REMARK 500 11 LYS B 49 -50.96 -131.09 REMARK 500 11 ALA B 84 0.24 -68.26 REMARK 500 12 GLU A 22 41.65 -96.84 REMARK 500 12 LYS A 49 -50.36 -135.04 REMARK 500 12 SER B 2 -179.45 -65.99 REMARK 500 12 THR B 39 -60.62 -91.90 REMARK 500 12 PHE B 88 -15.92 -43.80 REMARK 500 13 LYS A 49 -54.58 -133.90 REMARK 500 13 ALA A 84 0.30 -61.85 REMARK 500 14 LYS A 49 -47.26 -138.17 REMARK 500 14 ALA A 84 -4.43 -58.01 REMARK 500 14 THR B 39 -61.63 -93.72 REMARK 500 14 LYS B 49 -44.34 -133.48 REMARK 500 REMARK 500 THIS ENTRY HAS 74 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18088 RELATED DB: BMRB REMARK 900 RELATED ID: 2LLU RELATED DB: PDB DBREF 2LLT A 1 93 UNP P23297 S10A1_HUMAN 2 94 DBREF 2LLT B 1 93 UNP P23297 S10A1_HUMAN 2 94 SEQRES 1 A 93 GLY SER GLU LEU GLU THR ALA MET GLU THR LEU ILE ASN SEQRES 2 A 93 VAL PHE HIS ALA HIS SER GLY LYS GLU GLY ASP LYS TYR SEQRES 3 A 93 LYS LEU SER LYS LYS GLU LEU LYS GLU LEU LEU GLN THR SEQRES 4 A 93 GLU LEU SER GLY PHE LEU ASP ALA GLN LYS ASP VAL ASP SEQRES 5 A 93 ALA VAL ASP LYS VAL MET LYS GLU LEU ASP GLU ASN GLY SEQRES 6 A 93 ASP GLY GLU VAL ASP PHE GLN GLU TYR VAL VAL LEU VAL SEQRES 7 A 93 ALA ALA LEU THR VAL ALA SNC ASN ASN PHE PHE TRP GLU SEQRES 8 A 93 ASN SER SEQRES 1 B 93 GLY SER GLU LEU GLU THR ALA MET GLU THR LEU ILE ASN SEQRES 2 B 93 VAL PHE HIS ALA HIS SER GLY LYS GLU GLY ASP LYS TYR SEQRES 3 B 93 LYS LEU SER LYS LYS GLU LEU LYS GLU LEU LEU GLN THR SEQRES 4 B 93 GLU LEU SER GLY PHE LEU ASP ALA GLN LYS ASP VAL ASP SEQRES 5 B 93 ALA VAL ASP LYS VAL MET LYS GLU LEU ASP GLU ASN GLY SEQRES 6 B 93 ASP GLY GLU VAL ASP PHE GLN GLU TYR VAL VAL LEU VAL SEQRES 7 B 93 ALA ALA LEU THR VAL ALA SNC ASN ASN PHE PHE TRP GLU SEQRES 8 B 93 ASN SER MODRES 2LLT SNC A 85 CYS S-NITROSO-CYSTEINE MODRES 2LLT SNC B 85 CYS S-NITROSO-CYSTEINE HET SNC A 85 12 HET SNC B 85 12 HETNAM SNC S-NITROSO-CYSTEINE FORMUL 1 SNC 2(C3 H6 N2 O3 S) HELIX 1 1 SER A 2 SER A 19 1 18 HELIX 2 2 LYS A 30 GLU A 40 1 11 HELIX 3 3 LEU A 41 ALA A 47 1 7 HELIX 4 4 ASP A 50 ASN A 64 1 15 HELIX 5 5 PHE A 71 ASN A 87 1 17 HELIX 6 6 PHE A 88 GLU A 91 5 4 HELIX 7 7 SER B 2 SER B 19 1 18 HELIX 8 8 LYS B 30 GLU B 40 1 11 HELIX 9 9 LEU B 41 ALA B 47 1 7 HELIX 10 10 ASP B 50 ASN B 64 1 15 HELIX 11 11 PHE B 71 SNC B 85 1 15 HELIX 12 12 ASN B 86 GLU B 91 5 6 SHEET 1 A 2 LYS A 27 SER A 29 0 SHEET 2 A 2 GLU A 68 ASP A 70 -1 O VAL A 69 N LEU A 28 SHEET 1 B 2 LYS B 27 SER B 29 0 SHEET 2 B 2 GLU B 68 ASP B 70 -1 O VAL B 69 N LEU B 28 LINK C ALA A 84 N SNC A 85 1555 1555 1.34 LINK C SNC A 85 N ASN A 86 1555 1555 1.35 LINK C ALA B 84 N SNC B 85 1555 1555 1.34 LINK C SNC B 85 N ASN B 86 1555 1555 1.34 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000