PDB Short entry for 2LON HEADER MEMBRANE PROTEIN 26-JAN-12 2LON TITLE BACKBONE STRUCTURE OF HUMAN MEMBRANE PROTEIN HIGD1B COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIG1 DOMAIN FAMILY MEMBER 1B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN CLST 11240; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HIGD1B; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: P23-GWN KEYWDS MEMBRANE PROTEIN, HELICAL BUNDLE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.KLAMMT,I.MASLENNIKOV,W.KWIATKOWSKI,S.CHOE REVDAT 3 14-JUN-23 2LON 1 REMARK REVDAT 2 15-AUG-12 2LON 1 JRNL REVDAT 1 23-MAY-12 2LON 0 JRNL AUTH C.KLAMMT,I.MASLENNIKOV,M.BAYRHUBER,C.EICHMANN,N.VAJPAI, JRNL AUTH 2 E.J.CHIU,K.Y.BLAIN,L.ESQUIVIES,J.H.KWON,B.BALANA,U.PIEPER, JRNL AUTH 3 A.SALI,P.A.SLESINGER,W.KWIATKOWSKI,R.RIEK,S.CHOE JRNL TITL FACILE BACKBONE STRUCTURE DETERMINATION OF HUMAN MEMBRANE JRNL TITL 2 PROTEINS BY NMR SPECTROSCOPY. JRNL REF NAT.METHODS V. 9 834 2012 JRNL REFN ISSN 1548-7091 JRNL PMID 22609626 JRNL DOI 10.1038/NMETH.2033 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 2.1, CYANA REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LON COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000102640. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 40 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 13C(1),15N-SELECTIVELY LABELED REMARK 210 -HIGD1B, 20 MM MES-BIS-TRIS, 2 % REMARK 210 LMPG, 0.5 MM DSS, 95% H2O/5% D2O; REMARK 210 15N-HIGD1B, 20 MM MES-BIS-TRIS, REMARK 210 2 % LMPG, 0.5 MM DSS, 95% H2O/5% REMARK 210 D2O; 13C,15N-HIGD1B, 20 MM MES- REMARK 210 BIS-TRIS, 2 % LMPG, 0.5 MM DSS, REMARK 210 95% H2O/5% D2O; 15N,2H(C)-HIGD1B, REMARK 210 20 MM MES-BIS-TRIS, 2 % LMPG, REMARK 210 0.5 MM DSS, 95% H2O/5% D2O; 13C, REMARK 210 15N-HIGD1B, 20 MM MES-BIS-TRIS, REMARK 210 2 % 95%-2H IN ALKYL CHAIN D27- REMARK 210 LMPG, 0.5 MM DSS, 95% H2O/5% D2O; REMARK 210 NULL; NULL; NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D HNCO; 3D REMARK 210 HNCO; 3D HNHA; 3D HNCACB; 3D 1H- REMARK 210 15N NOESY; 3D 13C-15N HSQC-NOESY- REMARK 210 HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX; UNIFORM NMR SYSTEM REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2.1, CARA, PROSA, MCCL, REMARK 210 CYANA, MOLMOL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -58.32 -125.69 REMARK 500 1 ALA A 3 72.47 -179.86 REMARK 500 1 ASN A 4 -60.44 74.88 REMARK 500 1 ARG A 5 170.81 62.15 REMARK 500 1 ARG A 6 141.83 62.06 REMARK 500 1 ASP A 12 164.28 -43.96 REMARK 500 1 ASP A 15 171.28 59.84 REMARK 500 1 CYS A 16 -96.43 -146.08 REMARK 500 1 VAL A 17 -88.78 -82.10 REMARK 500 1 SER A 18 171.66 59.97 REMARK 500 1 THR A 25 -172.47 -53.33 REMARK 500 1 ARG A 26 -86.05 -169.97 REMARK 500 1 GLU A 27 -36.94 179.99 REMARK 500 1 SER A 28 156.63 -39.08 REMARK 500 1 PRO A 32 -74.01 -74.92 REMARK 500 1 VAL A 41 -70.03 -52.81 REMARK 500 1 SER A 51 78.34 -111.00 REMARK 500 1 SER A 54 69.08 71.11 REMARK 500 1 THR A 55 -51.30 -129.82 REMARK 500 1 MET A 57 37.80 -176.86 REMARK 500 1 SER A 58 76.04 -160.57 REMARK 500 1 LEU A 61 72.93 68.85 REMARK 500 1 ILE A 62 -52.52 -164.93 REMARK 500 1 THR A 64 -152.87 -124.64 REMARK 500 1 ARG A 65 -66.06 -133.54 REMARK 500 1 TYR A 88 -34.00 -38.66 REMARK 500 1 VAL A 89 165.10 -48.49 REMARK 500 1 ARG A 91 -37.84 171.22 REMARK 500 1 ALA A 93 58.81 76.49 REMARK 500 1 ASP A 95 67.90 -104.04 REMARK 500 2 ASN A 4 103.01 56.07 REMARK 500 2 ARG A 5 -60.17 -101.36 REMARK 500 2 ARG A 6 110.34 65.40 REMARK 500 2 ASP A 13 -63.74 -179.05 REMARK 500 2 CYS A 16 -76.49 -74.97 REMARK 500 2 VAL A 17 -48.14 -132.96 REMARK 500 2 SER A 18 177.65 57.55 REMARK 500 2 LYS A 20 -70.01 -69.06 REMARK 500 2 ARG A 26 101.95 176.87 REMARK 500 2 GLU A 27 -65.54 175.48 REMARK 500 2 SER A 51 144.17 63.09 REMARK 500 2 THR A 55 -60.98 -157.44 REMARK 500 2 MET A 57 92.14 49.00 REMARK 500 2 ILE A 59 151.88 63.02 REMARK 500 2 HIS A 60 174.45 53.71 REMARK 500 2 ILE A 62 94.30 62.62 REMARK 500 2 THR A 64 -51.49 -131.37 REMARK 500 2 ARG A 65 -44.90 -157.23 REMARK 500 2 SER A 86 -70.13 -80.12 REMARK 500 2 VAL A 89 -80.40 -39.92 REMARK 500 REMARK 500 THIS ENTRY HAS 535 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18218 RELATED DB: BMRB REMARK 900 RELATED ID: 2LOM RELATED DB: PDB REMARK 900 RELATED ID: 2LOO RELATED DB: PDB REMARK 900 RELATED ID: 2LOP RELATED DB: PDB REMARK 900 RELATED ID: 2LOQ RELATED DB: PDB DBREF 2LON A 1 99 UNP Q9P298 HIG1B_HUMAN 1 99 SEQRES 1 A 99 MET SER ALA ASN ARG ARG TRP TRP VAL PRO PRO ASP ASP SEQRES 2 A 99 GLU ASP CYS VAL SER GLU LYS LEU LEU ARG LYS THR ARG SEQRES 3 A 99 GLU SER PRO LEU VAL PRO ILE GLY LEU GLY GLY CYS LEU SEQRES 4 A 99 VAL VAL ALA ALA TYR ARG ILE TYR ARG LEU ARG SER ARG SEQRES 5 A 99 GLY SER THR LYS MET SER ILE HIS LEU ILE HIS THR ARG SEQRES 6 A 99 VAL ALA ALA GLN ALA CYS ALA VAL GLY ALA ILE MET LEU SEQRES 7 A 99 GLY ALA VAL TYR THR MET TYR SER ASP TYR VAL LYS ARG SEQRES 8 A 99 MET ALA GLN ASP ALA GLY GLU LYS HELIX 1 1 VAL A 17 THR A 25 1 9 HELIX 2 2 PRO A 29 ARG A 50 1 22 HELIX 3 3 ARG A 65 TYR A 88 1 24 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000