PDB Short entry for 2LOP HEADER MEMBRANE PROTEIN 26-JAN-12 2LOP TITLE BACKBONE STRUCTURE OF HUMAN MEMBRANE PROTEIN TMEM14A COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSMEMBRANE PROTEIN 14A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TMEM14A, C6ORF73, PTD011; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: P23-GWN KEYWDS MEMBRANE PROTEIN, HELICAL BUNDLE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.EICHMANN,C.KLAMMT,I.MASLENNIKOV,W.KWIATKOWSKI,R.RIEK,S.CHOE REVDAT 3 14-JUN-23 2LOP 1 REMARK SEQADV REVDAT 2 15-AUG-12 2LOP 1 JRNL REVDAT 1 23-MAY-12 2LOP 0 JRNL AUTH C.KLAMMT,I.MASLENNIKOV,M.BAYRHUBER,C.EICHMANN,N.VAJPAI, JRNL AUTH 2 E.J.CHIU,K.Y.BLAIN,L.ESQUIVIES,J.H.KWON,B.BALANA,U.PIEPER, JRNL AUTH 3 A.SALI,P.A.SLESINGER,W.KWIATKOWSKI,R.RIEK,S.CHOE JRNL TITL FACILE BACKBONE STRUCTURE DETERMINATION OF HUMAN MEMBRANE JRNL TITL 2 PROTEINS BY NMR SPECTROSCOPY. JRNL REF NAT.METHODS V. 9 834 2012 JRNL REFN ISSN 1548-7091 JRNL PMID 22609626 JRNL DOI 10.1038/NMETH.2033 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, CYANA REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LOP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000102642. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 40 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 15N-TMEM14A, 20 MM MES-BIS-TRIS, REMARK 210 2 % LMPG, 0.5 MM DSS, 95% H2O/5% REMARK 210 D2O; 13C,15N-TMEM14A, 20 MM MES- REMARK 210 BIS-TRIS, 2 % LMPG, 0.5 MM DSS, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCACB; 3D 13C-15N HSQC-NOESY- REMARK 210 HSQC; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, CARA, PROSA, CYANA, REMARK 210 MOLMOL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A -8 REMARK 465 THR A -7 REMARK 465 SER A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 LYS A -3 REMARK 465 LYS A -2 REMARK 465 VAL A -1 REMARK 465 GLY A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 12 HG SER A 16 1.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 124.37 62.60 REMARK 500 1 LEU A 3 74.27 -102.97 REMARK 500 1 TYR A 20 91.39 38.72 REMARK 500 1 LYS A 21 53.69 -171.58 REMARK 500 1 ARG A 22 -56.88 -151.53 REMARK 500 1 ARG A 23 172.07 -49.48 REMARK 500 1 SER A 28 -43.82 176.06 REMARK 500 1 VAL A 46 78.00 66.95 REMARK 500 1 ASN A 48 -50.42 -159.73 REMARK 500 1 ASP A 49 156.21 -41.93 REMARK 500 1 LYS A 50 -178.56 -55.85 REMARK 500 1 ASP A 52 177.36 -56.75 REMARK 500 1 VAL A 53 -75.30 67.62 REMARK 500 1 PHE A 71 142.09 -38.26 REMARK 500 1 LYS A 75 172.42 -53.60 REMARK 500 1 LYS A 76 179.39 58.49 REMARK 500 2 TYR A 20 -49.08 177.87 REMARK 500 2 LYS A 21 -151.93 178.01 REMARK 500 2 ARG A 23 -46.16 -136.60 REMARK 500 2 SER A 28 -66.70 74.73 REMARK 500 2 ARG A 45 -71.96 -90.40 REMARK 500 2 SER A 47 103.12 58.38 REMARK 500 2 ASN A 48 99.33 178.60 REMARK 500 2 ASP A 49 93.48 72.59 REMARK 500 2 ARG A 51 -61.92 -103.00 REMARK 500 2 ASP A 52 -62.36 -162.46 REMARK 500 2 VAL A 53 28.71 -146.36 REMARK 500 2 MET A 67 -77.91 -90.02 REMARK 500 2 VAL A 69 70.00 -155.03 REMARK 500 2 ARG A 70 46.62 -150.41 REMARK 500 2 ARG A 73 -54.45 79.46 REMARK 500 2 SER A 74 138.26 -39.36 REMARK 500 2 LYS A 75 101.14 54.33 REMARK 500 2 LYS A 76 138.66 64.11 REMARK 500 2 MET A 78 154.59 175.98 REMARK 500 3 ASP A 2 -55.48 -171.06 REMARK 500 3 LEU A 3 70.09 -68.07 REMARK 500 3 TYR A 20 92.42 38.73 REMARK 500 3 VAL A 26 100.43 -40.23 REMARK 500 3 SER A 28 -66.40 -171.87 REMARK 500 3 ALA A 39 -71.29 -61.12 REMARK 500 3 SER A 47 143.84 79.05 REMARK 500 3 ASN A 48 -35.20 174.08 REMARK 500 3 ASP A 49 79.80 -155.50 REMARK 500 3 ARG A 51 132.21 64.52 REMARK 500 3 ASP A 52 127.69 68.90 REMARK 500 3 ARG A 73 -46.61 179.99 REMARK 500 3 LYS A 76 173.73 66.55 REMARK 500 4 ILE A 4 -47.89 -174.92 REMARK 500 4 TYR A 20 98.05 47.28 REMARK 500 REMARK 500 THIS ENTRY HAS 330 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18220 RELATED DB: BMRB REMARK 900 RELATED ID: 2LOM RELATED DB: PDB REMARK 900 RELATED ID: 2LON RELATED DB: PDB REMARK 900 RELATED ID: 2LOO RELATED DB: PDB REMARK 900 RELATED ID: 2LOQ RELATED DB: PDB DBREF 2LOP A 1 99 UNP Q9Y6G1 TM14A_HUMAN 1 99 SEQADV 2LOP MET A -8 UNP Q9Y6G1 EXPRESSION TAG SEQADV 2LOP THR A -7 UNP Q9Y6G1 EXPRESSION TAG SEQADV 2LOP SER A -6 UNP Q9Y6G1 EXPRESSION TAG SEQADV 2LOP LEU A -5 UNP Q9Y6G1 EXPRESSION TAG SEQADV 2LOP TYR A -4 UNP Q9Y6G1 EXPRESSION TAG SEQADV 2LOP LYS A -3 UNP Q9Y6G1 EXPRESSION TAG SEQADV 2LOP LYS A -2 UNP Q9Y6G1 EXPRESSION TAG SEQADV 2LOP VAL A -1 UNP Q9Y6G1 EXPRESSION TAG SEQADV 2LOP GLY A 0 UNP Q9Y6G1 EXPRESSION TAG SEQRES 1 A 108 MET THR SER LEU TYR LYS LYS VAL GLY MET ASP LEU ILE SEQRES 2 A 108 GLY PHE GLY TYR ALA ALA LEU VAL THR PHE GLY SER ILE SEQRES 3 A 108 PHE GLY TYR LYS ARG ARG GLY GLY VAL PRO SER LEU ILE SEQRES 4 A 108 ALA GLY LEU PHE VAL GLY CYS LEU ALA GLY TYR GLY ALA SEQRES 5 A 108 TYR ARG VAL SER ASN ASP LYS ARG ASP VAL LYS VAL SER SEQRES 6 A 108 LEU PHE THR ALA PHE PHE LEU ALA THR ILE MET GLY VAL SEQRES 7 A 108 ARG PHE LYS ARG SER LYS LYS ILE MET PRO ALA GLY LEU SEQRES 8 A 108 VAL ALA GLY LEU SER LEU MET MET ILE LEU ARG LEU VAL SEQRES 9 A 108 LEU LEU LEU LEU HELIX 1 1 GLY A 5 TYR A 20 1 16 HELIX 2 2 SER A 28 VAL A 46 1 19 HELIX 3 3 VAL A 53 GLY A 68 1 16 HELIX 4 4 ILE A 77 LEU A 97 1 21 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000