PDB Short entry for 2LR5 HEADER ANTIMICROBIAL PROTEIN 22-MAR-12 2LR5 TITLE 1H CHEMICAL SHIFT ASSIGNMENTS FOR MICASIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MICASIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ARTHRODERMA OTAE; SOURCE 4 ORGANISM_COMMON: MICROSPORUM CANIS; SOURCE 5 ORGANISM_TAXID: 63405 KEYWDS ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.J.HARVEY,D.J.CRAIK,S.ZHU REVDAT 2 14-JUN-23 2LR5 1 REMARK REVDAT 1 27-JUN-12 2LR5 0 JRNL AUTH S.ZHU,B.GAO,P.J.HARVEY,D.J.CRAIK JRNL TITL DERMATOPHYTIC DEFENSIN WITH ANTIINFECTIVE POTENTIAL JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 8495 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22586077 JRNL DOI 10.1073/PNAS.1201263109 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 2.1, CNSSOLVE 1.2 REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), BRUNGER, ADAMS, CLORE, REMARK 3 GROS, NILGES AND READ (CNSSOLVE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LR5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000102729. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 3 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM PROTEIN-1, 90% H2O/10% REMARK 210 D2O; 0.5 MM PROTEIN-2, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D DQF-COSY; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2.1, SPARKY 2.6, CYANA REMARK 210 3.0, CNSSOLVE 1.2 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG A 20 OXT GLN A 38 1.58 REMARK 500 HE ARG A 20 O GLN A 38 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 18 31.07 -95.18 REMARK 500 1 ALA A 31 -76.54 -93.99 REMARK 500 2 ASN A 7 43.51 -97.81 REMARK 500 2 ALA A 26 -165.94 -121.85 REMARK 500 2 ALA A 31 -75.21 -111.51 REMARK 500 3 ILE A 18 30.32 -95.25 REMARK 500 3 LEU A 29 -78.42 67.74 REMARK 500 3 ALA A 31 -82.79 -102.41 REMARK 500 4 PHE A 6 -62.71 -98.58 REMARK 500 4 ASN A 7 54.88 -113.21 REMARK 500 4 ALA A 31 -41.98 -130.15 REMARK 500 5 ASN A 7 43.96 -92.35 REMARK 500 5 PHE A 24 -173.56 -172.69 REMARK 500 5 ALA A 31 -124.59 -76.01 REMARK 500 6 ASN A 7 50.09 -105.18 REMARK 500 6 ILE A 18 30.93 -99.16 REMARK 500 6 LEU A 29 -163.79 65.53 REMARK 500 6 ALA A 31 -73.92 -122.30 REMARK 500 7 PHE A 6 -71.39 -63.27 REMARK 500 7 ILE A 18 30.87 -99.18 REMARK 500 7 ALA A 26 -161.55 -127.90 REMARK 500 7 ARG A 30 -29.15 70.22 REMARK 500 8 ARG A 30 -37.50 -137.58 REMARK 500 9 ARG A 30 88.40 -153.48 REMARK 500 10 ASN A 7 44.14 -94.65 REMARK 500 10 ALA A 26 -159.89 -140.21 REMARK 500 10 ALA A 31 -65.50 -108.14 REMARK 500 11 ARG A 30 -31.55 -154.66 REMARK 500 12 PHE A 6 -72.61 -90.31 REMARK 500 12 ASN A 7 56.99 -99.21 REMARK 500 12 LEU A 29 37.72 -81.48 REMARK 500 13 ASN A 7 44.49 -109.38 REMARK 500 13 LEU A 29 51.47 -97.45 REMARK 500 13 ARG A 30 -49.47 -173.62 REMARK 500 15 ASN A 7 44.64 -96.46 REMARK 500 15 LEU A 29 -73.32 69.26 REMARK 500 15 ALA A 31 93.84 -66.08 REMARK 500 16 ILE A 18 31.38 -99.55 REMARK 500 16 PRO A 28 -72.35 -69.40 REMARK 500 17 PHE A 6 -76.57 -85.77 REMARK 500 18 PHE A 6 -62.37 -93.03 REMARK 500 18 ASN A 7 46.34 -108.77 REMARK 500 19 ASN A 7 59.18 -105.66 REMARK 500 19 ARG A 30 67.33 64.71 REMARK 500 19 ALA A 31 95.87 -55.99 REMARK 500 19 LYS A 37 43.57 -107.28 REMARK 500 20 ILE A 18 30.52 -96.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18347 RELATED DB: BMRB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THIS PROTEIN WAS NOT AVAILABLE AT THE UNIPROT REMARK 999 KNOWLEDGEBASE DATABASE (UNIPROTKB) AT THE TIME OF PROCESSING. DBREF 2LR5 A 1 38 PDB 2LR5 2LR5 1 38 SEQRES 1 A 38 GLY PHE GLY CYS PRO PHE ASN GLU ASN GLU CYS HIS ALA SEQRES 2 A 38 HIS CYS LEU SER ILE GLY ARG LYS PHE GLY PHE CYS ALA SEQRES 3 A 38 GLY PRO LEU ARG ALA THR CYS THR CYS GLY LYS GLN HELIX 1 1 ASN A 7 ILE A 18 1 12 SHEET 1 A 2 GLY A 23 ALA A 26 0 SHEET 2 A 2 THR A 32 CYS A 35 -1 O THR A 34 N PHE A 24 SSBOND 1 CYS A 4 CYS A 25 1555 1555 2.03 SSBOND 2 CYS A 11 CYS A 33 1555 1555 2.03 SSBOND 3 CYS A 15 CYS A 35 1555 1555 2.03 CISPEP 1 CYS A 4 PRO A 5 1 0.29 CISPEP 2 CYS A 4 PRO A 5 2 0.19 CISPEP 3 CYS A 4 PRO A 5 3 -0.68 CISPEP 4 CYS A 4 PRO A 5 4 -0.06 CISPEP 5 CYS A 4 PRO A 5 5 -0.35 CISPEP 6 CYS A 4 PRO A 5 6 -0.14 CISPEP 7 CYS A 4 PRO A 5 7 0.09 CISPEP 8 CYS A 4 PRO A 5 8 -0.46 CISPEP 9 CYS A 4 PRO A 5 9 -0.11 CISPEP 10 CYS A 4 PRO A 5 10 0.31 CISPEP 11 CYS A 4 PRO A 5 11 -0.29 CISPEP 12 CYS A 4 PRO A 5 12 -0.09 CISPEP 13 CYS A 4 PRO A 5 13 -0.25 CISPEP 14 CYS A 4 PRO A 5 14 0.29 CISPEP 15 CYS A 4 PRO A 5 15 0.70 CISPEP 16 CYS A 4 PRO A 5 16 -0.36 CISPEP 17 CYS A 4 PRO A 5 17 0.61 CISPEP 18 CYS A 4 PRO A 5 18 0.05 CISPEP 19 CYS A 4 PRO A 5 19 -0.24 CISPEP 20 CYS A 4 PRO A 5 20 -0.06 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000