PDB Short entry for 2M3E HEADER MEMBRANE PROTEIN 17-JAN-13 2M3E TITLE THE INTEGRIN ALPHA L TRANSMEMBRANE DOMAIN IN BICELLES: STRUCTURE AND TITLE 2 INTERACTION WITH INTEGRIN BETA 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN ALPHA-L; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TRANSMEMBRANE DOMAIN; COMPND 5 SYNONYM: CD11 ANTIGEN-LIKE FAMILY MEMBER A, LEUKOCYTE ADHESION COMPND 6 GLYCOPROTEIN LFA-1 ALPHA CHAIN, LFA-1A, LEUKOCYTE FUNCTION-ASSOCIATED COMPND 7 MOLECULE 1 ALPHA CHAIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ITGAL, CD11A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: BL21 CODON-PLUS KEYWDS INTEGRIN ALPAH L TM DOMAIN, POLAR INTERACTION, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.SURYA,Y.LI,O.MILLET,T.DIERCKS,J.TORRES REVDAT 2 14-JUN-23 2M3E 1 REMARK SEQADV REVDAT 1 29-JAN-14 2M3E 0 JRNL AUTH W.SURYA,Y.LI,O.MILLET,T.DIERCKS,J.TORRES JRNL TITL THE INTEGRIN ALPHA L TRANSMEMBRANE DOMAIN IN BICELLES: JRNL TITL 2 STRUCTURE AND INTERACTION WITH INTEGRIN BETA 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CNS REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M3E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000103158. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6 MM [U-100% 13C; U-100% 15N] REMARK 210 INTEGRIN AL TM DOMAIN, 50 MM REMARK 210 POTASSIUM PHOSPHATE, 95% H2O/5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HN(CO)CA; 3D HCCH-TOCSY; REMARK 210 3D 1H-13C NOESY ALIPHATIC; 3D REMARK 210 1H-13C NOESY AROMATIC; 3D 1H-15N REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A1057 51.14 -92.14 REMARK 500 1 GLU A1061 -75.28 -79.26 REMARK 500 1 LYS A1062 93.94 -171.22 REMARK 500 1 GLU A1101 99.99 -173.32 REMARK 500 2 ALA A1056 34.17 -98.61 REMARK 500 2 VAL A1058 100.89 -179.68 REMARK 500 2 VAL A1059 -41.16 -136.40 REMARK 500 2 LYS A1062 91.93 54.56 REMARK 500 2 PHE A1091 -63.93 -128.00 REMARK 500 2 LYS A1093 -174.01 -60.97 REMARK 500 2 ASN A1095 114.95 -167.19 REMARK 500 2 GLU A1098 -62.08 -126.49 REMARK 500 3 LYS A1062 76.30 44.08 REMARK 500 3 LYS A1093 103.90 -51.73 REMARK 500 3 ARG A1094 -68.58 -133.63 REMARK 500 3 LYS A1097 -177.77 -58.46 REMARK 500 3 LYS A1099 30.85 -97.13 REMARK 500 4 VAL A1059 -48.52 -131.79 REMARK 500 4 GLU A1061 -164.79 -65.66 REMARK 500 4 PHE A1091 -57.80 -125.70 REMARK 500 5 PHE A1091 -61.25 -109.17 REMARK 500 5 LYS A1099 70.58 -101.80 REMARK 500 6 ASP A1057 53.21 -91.87 REMARK 500 6 VAL A1058 66.06 -117.76 REMARK 500 6 LYS A1093 108.89 -51.25 REMARK 500 6 ARG A1094 120.23 -172.54 REMARK 500 7 GLU A1061 119.51 -160.40 REMARK 500 7 LYS A1062 83.41 46.34 REMARK 500 8 ALA A1056 61.79 -117.93 REMARK 500 8 VAL A1058 46.85 -98.49 REMARK 500 8 PHE A1091 -61.24 -108.71 REMARK 500 9 LYS A1062 79.68 48.21 REMARK 500 9 GLU A1098 -55.87 -120.02 REMARK 500 9 GLU A1101 41.79 39.35 REMARK 500 10 VAL A1058 87.76 -151.83 REMARK 500 10 LYS A1062 103.11 170.31 REMARK 500 11 ALA A1056 53.48 -115.71 REMARK 500 11 GLU A1101 41.73 39.49 REMARK 500 12 VAL A1058 64.80 63.23 REMARK 500 12 LYS A1062 84.71 37.25 REMARK 500 12 PHE A1091 -64.24 -124.67 REMARK 500 12 LYS A1093 102.89 -52.80 REMARK 500 13 ALA A1056 -176.76 -61.36 REMARK 500 13 LYS A1099 41.18 39.22 REMARK 500 13 MET A1100 -70.15 -68.54 REMARK 500 13 GLU A1101 52.27 30.70 REMARK 500 14 ASP A1057 119.17 -178.68 REMARK 500 14 VAL A1058 89.96 -156.64 REMARK 500 14 TYR A1060 -73.73 -130.27 REMARK 500 14 GLU A1061 25.99 -149.91 REMARK 500 REMARK 500 THIS ENTRY HAS 84 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18958 RELATED DB: BMRB DBREF 2M3E A 1057 1103 UNP P20701 ITAL_HUMAN 1082 1128 SEQADV 2M3E SER A 1054 UNP P20701 EXPRESSION TAG SEQADV 2M3E ASN A 1055 UNP P20701 EXPRESSION TAG SEQADV 2M3E ALA A 1056 UNP P20701 EXPRESSION TAG SEQRES 1 A 50 SER ASN ALA ASP VAL VAL TYR GLU LYS GLN MET LEU TYR SEQRES 2 A 50 LEU TYR VAL LEU SER GLY ILE GLY GLY LEU LEU LEU LEU SEQRES 3 A 50 LEU LEU ILE PHE ILE VAL LEU TYR LYS VAL GLY PHE PHE SEQRES 4 A 50 LYS ARG ASN LEU LYS GLU LYS MET GLU ALA GLY HELIX 1 1 MET A 1064 GLY A 1090 1 27 HELIX 2 2 PHE A 1091 ASN A 1095 5 5 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000