PDB Short entry for 2MI2 HEADER TRANSPORT PROTEIN 08-DEC-13 2MI2 TITLE SOLUTION STRUCTURE OF THE E. COLI TATB PROTEIN IN DPC MICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-101; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: TATB, LF82_2221; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-21A KEYWDS TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR Y.ZHANG,L.WANG,Y.HU,C.JIN REVDAT 3 14-JUN-23 2MI2 1 REMARK REVDAT 2 24-AUG-22 2MI2 1 JRNL REMARK SEQADV REVDAT 1 30-APR-14 2MI2 0 JRNL AUTH Y.ZHANG,L.WANG,Y.HU,C.JIN JRNL TITL SOLUTION STRUCTURE OF THE TATB COMPONENT OF THE JRNL TITL 2 TWIN-ARGININE TRANSLOCATION SYSTEM. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1838 1881 2014 JRNL REFN ISSN 0006-3002 JRNL PMID 24699374 JRNL DOI 10.1016/J.BBAMEM.2014.03.015 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CYANA REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MI2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000103639. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 0.02 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 TRANSPORT PROTEIN-1, 20 MM REMARK 210 SODIUM ACETATE-2, 40 MM DPC-3, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCO; 3D HNCA; REMARK 210 3D HNCACB; 3D HBHA(CO)NH; 3D REMARK 210 HN(CO)CA; 3D HCCH-TOCSY; 3D HCCH- REMARK 210 COSY; 3D 1H-13C NOESY AROMATIC; REMARK 210 3D 1H-13C NOESY ALIPHATIC; 3D 1H- REMARK 210 15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, CYANA, TALOS, REMARK 210 PROCHECKNMR, SANE REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-15 REMARK 465 RES C SSSEQI REMARK 465 HIS A 105 REMARK 465 HIS A 106 REMARK 465 HIS A 107 REMARK 465 HIS A 108 REMARK 465 HIS A 109 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 3 -63.21 -179.81 REMARK 500 1 ILE A 4 -83.42 62.43 REMARK 500 1 PHE A 6 -25.42 -176.24 REMARK 500 1 GLU A 49 -106.00 -124.67 REMARK 500 1 LEU A 54 -49.03 -145.46 REMARK 500 1 LYS A 55 37.90 -76.89 REMARK 500 1 ASN A 73 23.87 -156.38 REMARK 500 1 THR A 75 140.06 176.93 REMARK 500 1 ALA A 98 25.82 -140.71 REMARK 500 1 ASN A 99 60.00 -171.22 REMARK 500 1 ASP A 100 -70.59 -174.99 REMARK 500 2 ASP A 3 -66.29 178.92 REMARK 500 2 ILE A 4 -82.96 63.84 REMARK 500 2 PHE A 6 -25.35 -176.22 REMARK 500 2 VAL A 19 -62.26 -97.43 REMARK 500 2 PRO A 22 9.80 -69.75 REMARK 500 2 GLU A 49 -93.01 -140.20 REMARK 500 2 GLU A 53 -33.92 -145.41 REMARK 500 2 LEU A 54 44.63 -152.66 REMARK 500 2 LYS A 55 -53.53 -156.27 REMARK 500 2 ASN A 73 23.36 -155.64 REMARK 500 2 THR A 75 138.98 177.11 REMARK 500 2 ALA A 98 -32.87 -179.92 REMARK 500 2 ASN A 99 -40.56 -152.42 REMARK 500 2 ASP A 100 74.45 66.86 REMARK 500 2 GLU A 103 53.69 -160.21 REMARK 500 3 ASP A 3 -63.50 -179.79 REMARK 500 3 ILE A 4 -84.25 62.34 REMARK 500 3 PHE A 6 -25.67 -176.10 REMARK 500 3 GLU A 49 -102.93 -142.51 REMARK 500 3 GLU A 53 -43.48 -151.31 REMARK 500 3 LEU A 54 -41.17 -136.76 REMARK 500 3 ALA A 98 -41.08 -173.66 REMARK 500 3 ASN A 99 57.30 -179.12 REMARK 500 3 GLU A 103 -163.26 44.11 REMARK 500 4 ASP A 3 -66.32 179.49 REMARK 500 4 ILE A 4 -83.04 63.76 REMARK 500 4 PHE A 6 -25.40 -176.12 REMARK 500 4 GLU A 49 -104.22 -139.31 REMARK 500 4 GLU A 53 -43.84 -150.85 REMARK 500 4 LEU A 54 -41.63 -135.52 REMARK 500 4 THR A 72 -67.96 -26.18 REMARK 500 4 ALA A 98 35.12 177.28 REMARK 500 4 ASN A 99 75.25 76.14 REMARK 500 4 GLU A 103 -49.53 -156.51 REMARK 500 5 ASP A 3 -63.26 179.25 REMARK 500 5 ILE A 4 -83.65 62.77 REMARK 500 5 PHE A 6 -19.27 -175.49 REMARK 500 5 GLU A 49 -102.22 -137.68 REMARK 500 5 GLU A 53 -43.68 -150.53 REMARK 500 REMARK 500 THIS ENTRY HAS 164 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19618 RELATED DB: BMRB DBREF 2MI2 A 1 101 UNP E2QI32 E2QI32_ECOLX 1 101 SEQADV 2MI2 LEU A 102 UNP E2QI32 EXPRESSION TAG SEQADV 2MI2 GLU A 103 UNP E2QI32 EXPRESSION TAG SEQADV 2MI2 HIS A 104 UNP E2QI32 EXPRESSION TAG SEQADV 2MI2 HIS A 105 UNP E2QI32 EXPRESSION TAG SEQADV 2MI2 HIS A 106 UNP E2QI32 EXPRESSION TAG SEQADV 2MI2 HIS A 107 UNP E2QI32 EXPRESSION TAG SEQADV 2MI2 HIS A 108 UNP E2QI32 EXPRESSION TAG SEQADV 2MI2 HIS A 109 UNP E2QI32 EXPRESSION TAG SEQRES 1 A 109 MET PHE ASP ILE GLY PHE SER GLU LEU LEU LEU VAL PHE SEQRES 2 A 109 ILE ILE GLY LEU VAL VAL LEU GLY PRO GLN ARG LEU PRO SEQRES 3 A 109 VAL ALA VAL LYS THR VAL ALA GLY TRP ILE ARG ALA LEU SEQRES 4 A 109 ARG SER LEU ALA THR THR VAL GLN ASN GLU LEU THR GLN SEQRES 5 A 109 GLU LEU LYS LEU GLN GLU PHE GLN ASP SER LEU LYS LYS SEQRES 6 A 109 VAL GLU LYS ALA SER LEU THR ASN LEU THR PRO GLU LEU SEQRES 7 A 109 LYS ALA SER MET ASP GLU LEU ARG GLN ALA ALA GLU SER SEQRES 8 A 109 MET LYS ARG SER TYR VAL ALA ASN ASP PRO LEU GLU HIS SEQRES 9 A 109 HIS HIS HIS HIS HIS HELIX 1 1 PHE A 6 GLY A 21 1 16 HELIX 2 2 PRO A 22 ARG A 24 5 3 HELIX 3 3 LEU A 25 VAL A 46 1 22 HELIX 4 4 GLU A 49 LEU A 54 1 6 HELIX 5 5 GLN A 57 THR A 72 1 16 HELIX 6 6 THR A 75 VAL A 97 1 23 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000