PDB Short entry for 2NTN HEADER OXIDOREDUCTASE 08-NOV-06 2NTN TITLE CRYSTAL STRUCTURE OF MABA-C60V/G139A/S144L COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-KETOACYL-ACYL CARRIER PROTEIN REDUCTASE, BETA-KETOACYL COMPND 5 CARRIER PROTEIN REDUCTASE; COMPND 6 EC: 1.1.1.100; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: FABG, FABG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS BETA-KETOACYL ACP REDUCTASE, OXIDOREDUCTASE, INACTIVE, SDR EXPDTA X-RAY DIFFRACTION AUTHOR G.PONCET-MONTANGE,S.DUCASSE-CABANOT,A.QUEMARD,G.LABESSE,M.COHEN- AUTHOR 2 GONSAUD REVDAT 6 25-OCT-23 2NTN 1 REMARK REVDAT 5 10-NOV-21 2NTN 1 SEQADV REVDAT 4 13-JUL-11 2NTN 1 VERSN REVDAT 3 24-FEB-09 2NTN 1 VERSN REVDAT 2 14-AUG-07 2NTN 1 JRNL REVDAT 1 21-NOV-06 2NTN 0 JRNL AUTH G.PONCET-MONTANGE,S.DUCASSE-CABANOT,A.QUEMARD,G.LABESSE, JRNL AUTH 2 M.COHEN-GONSAUD JRNL TITL LACK OF DYNAMICS IN THE MABA ACTIVE SITE KILLS THE ENZYME JRNL TITL 2 ACTIVITY: PRACTICAL CONSEQUENCES FOR DRUG-DESIGN STUDIES JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 63 923 2007 JRNL REFN ISSN 0907-4449 JRNL PMID 17642518 JRNL DOI 10.1107/S0907444907024158 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 16293 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 868 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1216 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3065 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 239 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 30.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.43000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : 0.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.91000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.443 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.175 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.569 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3103 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4190 ; 1.168 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 417 ; 6.207 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 120 ;35.012 ;23.417 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 491 ;16.768 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;13.649 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 491 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2324 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1378 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2113 ; 0.296 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 207 ; 0.153 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.178 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.135 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2147 ; 0.431 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3308 ; 0.719 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1058 ; 1.085 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 882 ; 1.696 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 19.3786 18.7361 15.3738 REMARK 3 T TENSOR REMARK 3 T11: -0.0817 T22: -0.0969 REMARK 3 T33: -0.0894 T12: -0.0328 REMARK 3 T13: -0.0305 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 3.0404 L22: 3.4764 REMARK 3 L33: 2.9299 L12: 0.3177 REMARK 3 L13: 1.1561 L23: -1.0928 REMARK 3 S TENSOR REMARK 3 S11: -0.1058 S12: -0.2656 S13: 0.3821 REMARK 3 S21: 0.1652 S22: -0.0517 S23: -0.0138 REMARK 3 S31: -0.4311 S32: -0.0896 S33: 0.1574 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 245 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8685 10.5078 8.9772 REMARK 3 T TENSOR REMARK 3 T11: -0.1151 T22: -0.0500 REMARK 3 T33: -0.1094 T12: -0.0028 REMARK 3 T13: 0.0022 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.0331 L22: 3.2103 REMARK 3 L33: 1.3772 L12: -0.1387 REMARK 3 L13: 1.1692 L23: -0.5718 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: -0.1428 S13: 0.0996 REMARK 3 S21: 0.0727 S22: -0.0331 S23: 0.2472 REMARK 3 S31: -0.1525 S32: -0.2334 S33: 0.0356 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 82 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8599 -21.2169 15.7429 REMARK 3 T TENSOR REMARK 3 T11: -0.0950 T22: -0.1025 REMARK 3 T33: -0.0624 T12: 0.0164 REMARK 3 T13: -0.0419 T23: 0.0488 REMARK 3 L TENSOR REMARK 3 L11: 3.4355 L22: 4.1757 REMARK 3 L33: 2.3183 L12: 1.4818 REMARK 3 L13: 1.1856 L23: -0.2415 REMARK 3 S TENSOR REMARK 3 S11: 0.1515 S12: 0.0034 S13: -0.4653 REMARK 3 S21: 0.1201 S22: -0.0904 S23: -0.3402 REMARK 3 S31: 0.3712 S32: 0.1392 S33: -0.0610 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 83 B 245 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5160 -13.2981 7.1222 REMARK 3 T TENSOR REMARK 3 T11: -0.1016 T22: -0.0676 REMARK 3 T33: -0.0951 T12: -0.0146 REMARK 3 T13: -0.0108 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 1.6599 L22: 2.9974 REMARK 3 L33: 0.3188 L12: 0.5070 REMARK 3 L13: 0.6778 L23: 0.5527 REMARK 3 S TENSOR REMARK 3 S11: 0.1335 S12: 0.0886 S13: -0.2112 REMARK 3 S21: -0.1197 S22: -0.0620 S23: -0.0445 REMARK 3 S31: 0.0436 S32: 0.0420 S33: -0.0715 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2NTN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040287. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5420 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17168 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 26.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.36500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1UZM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 2000, 0.35MM MN ACETATE, 10% REMARK 280 GLYCEROL, 0.1M TRIS, PH 8, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 316K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.80650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.64250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.80650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 58.64250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 9680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 367 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 THR A 6 REMARK 465 GLU A 7 REMARK 465 GLY A 8 REMARK 465 SER A 92 REMARK 465 ALA A 93 REMARK 465 ASP A 94 REMARK 465 ALA A 95 REMARK 465 PHE A 96 REMARK 465 LEU A 97 REMARK 465 MET A 98 REMARK 465 ARG A 99 REMARK 465 SER A 142 REMARK 465 GLY A 143 REMARK 465 LEU A 144 REMARK 465 TRP A 145 REMARK 465 GLY A 146 REMARK 465 ILE A 147 REMARK 465 GLY A 148 REMARK 465 ASN A 149 REMARK 465 GLU A 196 REMARK 465 ARG A 197 REMARK 465 ILE A 198 REMARK 465 GLY A 246 REMARK 465 HIS A 247 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ALA B 3 REMARK 465 THR B 4 REMARK 465 ALA B 5 REMARK 465 THR B 6 REMARK 465 GLU B 7 REMARK 465 GLY B 8 REMARK 465 SER B 92 REMARK 465 ALA B 93 REMARK 465 ASP B 94 REMARK 465 ALA B 95 REMARK 465 PHE B 96 REMARK 465 LEU B 97 REMARK 465 MET B 98 REMARK 465 ARG B 99 REMARK 465 SER B 142 REMARK 465 GLY B 143 REMARK 465 LEU B 144 REMARK 465 TRP B 145 REMARK 465 GLY B 146 REMARK 465 ILE B 147 REMARK 465 GLY B 148 REMARK 465 ASN B 149 REMARK 465 ASP B 189 REMARK 465 MET B 190 REMARK 465 THR B 191 REMARK 465 ARG B 192 REMARK 465 ALA B 193 REMARK 465 LEU B 194 REMARK 465 ASP B 195 REMARK 465 GLU B 196 REMARK 465 ARG B 197 REMARK 465 ILE B 198 REMARK 465 GLN B 199 REMARK 465 GLN B 200 REMARK 465 GLY B 201 REMARK 465 ALA B 202 REMARK 465 GLY B 246 REMARK 465 HIS B 247 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 25 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 103 CG CD OE1 OE2 REMARK 470 MET A 190 CG SD CE REMARK 470 ARG A 192 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU A 194 CG CD1 CD2 REMARK 470 ASP A 195 CG OD1 OD2 REMARK 470 LYS A 209 CD CE NZ REMARK 470 PHE B 205 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 209 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 255 O HOH B 301 2.18 REMARK 500 OE1 GLN A 33 O HOH A 365 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 189 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 61 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP B 66 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 228 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 53 138.70 -37.89 REMARK 500 LEU A 113 -62.04 -100.85 REMARK 500 LEU A 194 139.07 -174.73 REMARK 500 ASP A 240 15.88 -141.23 REMARK 500 LYS B 53 125.71 -38.27 REMARK 500 LEU B 113 -63.24 -95.83 REMARK 500 PHE B 205 23.96 -76.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 89 GLY A 90 50.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UZL RELATED DB: PDB REMARK 900 RELATED ID: 1UZM RELATED DB: PDB REMARK 900 RELATED ID: 1UZN RELATED DB: PDB DBREF 2NTN A 1 247 UNP P0A5Y4 FABG_MYCTU 1 247 DBREF 2NTN B 1 247 UNP P0A5Y4 FABG_MYCTU 1 247 SEQADV 2NTN MET A -19 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN GLY A -18 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER A -17 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER A -16 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS A -15 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS A -14 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS A -13 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS A -12 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS A -11 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS A -10 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER A -9 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER A -8 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN GLY A -7 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN LEU A -6 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN VAL A -5 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN PRO A -4 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN ARG A -3 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN GLY A -2 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER A -1 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS A 0 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN VAL A 60 UNP P0A5Y4 CYS 60 ENGINEERED MUTATION SEQADV 2NTN ALA A 139 UNP P0A5Y4 GLY 139 ENGINEERED MUTATION SEQADV 2NTN LEU A 144 UNP P0A5Y4 SER 144 ENGINEERED MUTATION SEQADV 2NTN MET B -19 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN GLY B -18 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER B -17 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER B -16 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS B -15 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS B -14 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS B -13 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS B -12 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS B -11 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS B -10 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER B -9 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER B -8 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN GLY B -7 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN LEU B -6 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN VAL B -5 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN PRO B -4 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN ARG B -3 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN GLY B -2 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN SER B -1 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN HIS B 0 UNP P0A5Y4 EXPRESSION TAG SEQADV 2NTN VAL B 60 UNP P0A5Y4 CYS 60 ENGINEERED MUTATION SEQADV 2NTN ALA B 139 UNP P0A5Y4 GLY 139 ENGINEERED MUTATION SEQADV 2NTN LEU B 144 UNP P0A5Y4 SER 144 ENGINEERED MUTATION SEQRES 1 A 267 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 267 LEU VAL PRO ARG GLY SER HIS MET THR ALA THR ALA THR SEQRES 3 A 267 GLU GLY ALA LYS PRO PRO PHE VAL SER ARG SER VAL LEU SEQRES 4 A 267 VAL THR GLY GLY ASN ARG GLY ILE GLY LEU ALA ILE ALA SEQRES 5 A 267 GLN ARG LEU ALA ALA ASP GLY HIS LYS VAL ALA VAL THR SEQRES 6 A 267 HIS ARG GLY SER GLY ALA PRO LYS GLY LEU PHE GLY VAL SEQRES 7 A 267 GLU VAL ASP VAL THR ASP SER ASP ALA VAL ASP ARG ALA SEQRES 8 A 267 PHE THR ALA VAL GLU GLU HIS GLN GLY PRO VAL GLU VAL SEQRES 9 A 267 LEU VAL SER ASN ALA GLY LEU SER ALA ASP ALA PHE LEU SEQRES 10 A 267 MET ARG MET THR GLU GLU LYS PHE GLU LYS VAL ILE ASN SEQRES 11 A 267 ALA ASN LEU THR GLY ALA PHE ARG VAL ALA GLN ARG ALA SEQRES 12 A 267 SER ARG SER MET GLN ARG ASN LYS PHE GLY ARG MET ILE SEQRES 13 A 267 PHE ILE ALA SER VAL SER GLY LEU TRP GLY ILE GLY ASN SEQRES 14 A 267 GLN ALA ASN TYR ALA ALA SER LYS ALA GLY VAL ILE GLY SEQRES 15 A 267 MET ALA ARG SER ILE ALA ARG GLU LEU SER LYS ALA ASN SEQRES 16 A 267 VAL THR ALA ASN VAL VAL ALA PRO GLY TYR ILE ASP THR SEQRES 17 A 267 ASP MET THR ARG ALA LEU ASP GLU ARG ILE GLN GLN GLY SEQRES 18 A 267 ALA LEU GLN PHE ILE PRO ALA LYS ARG VAL GLY THR PRO SEQRES 19 A 267 ALA GLU VAL ALA GLY VAL VAL SER PHE LEU ALA SER GLU SEQRES 20 A 267 ASP ALA SER TYR ILE SER GLY ALA VAL ILE PRO VAL ASP SEQRES 21 A 267 GLY GLY MET GLY MET GLY HIS SEQRES 1 B 267 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 267 LEU VAL PRO ARG GLY SER HIS MET THR ALA THR ALA THR SEQRES 3 B 267 GLU GLY ALA LYS PRO PRO PHE VAL SER ARG SER VAL LEU SEQRES 4 B 267 VAL THR GLY GLY ASN ARG GLY ILE GLY LEU ALA ILE ALA SEQRES 5 B 267 GLN ARG LEU ALA ALA ASP GLY HIS LYS VAL ALA VAL THR SEQRES 6 B 267 HIS ARG GLY SER GLY ALA PRO LYS GLY LEU PHE GLY VAL SEQRES 7 B 267 GLU VAL ASP VAL THR ASP SER ASP ALA VAL ASP ARG ALA SEQRES 8 B 267 PHE THR ALA VAL GLU GLU HIS GLN GLY PRO VAL GLU VAL SEQRES 9 B 267 LEU VAL SER ASN ALA GLY LEU SER ALA ASP ALA PHE LEU SEQRES 10 B 267 MET ARG MET THR GLU GLU LYS PHE GLU LYS VAL ILE ASN SEQRES 11 B 267 ALA ASN LEU THR GLY ALA PHE ARG VAL ALA GLN ARG ALA SEQRES 12 B 267 SER ARG SER MET GLN ARG ASN LYS PHE GLY ARG MET ILE SEQRES 13 B 267 PHE ILE ALA SER VAL SER GLY LEU TRP GLY ILE GLY ASN SEQRES 14 B 267 GLN ALA ASN TYR ALA ALA SER LYS ALA GLY VAL ILE GLY SEQRES 15 B 267 MET ALA ARG SER ILE ALA ARG GLU LEU SER LYS ALA ASN SEQRES 16 B 267 VAL THR ALA ASN VAL VAL ALA PRO GLY TYR ILE ASP THR SEQRES 17 B 267 ASP MET THR ARG ALA LEU ASP GLU ARG ILE GLN GLN GLY SEQRES 18 B 267 ALA LEU GLN PHE ILE PRO ALA LYS ARG VAL GLY THR PRO SEQRES 19 B 267 ALA GLU VAL ALA GLY VAL VAL SER PHE LEU ALA SER GLU SEQRES 20 B 267 ASP ALA SER TYR ILE SER GLY ALA VAL ILE PRO VAL ASP SEQRES 21 B 267 GLY GLY MET GLY MET GLY HIS FORMUL 3 HOH *239(H2 O) HELIX 1 1 ARG A 25 GLY A 39 1 15 HELIX 2 2 ASP A 64 GLY A 80 1 17 HELIX 3 3 THR A 101 LEU A 113 1 13 HELIX 4 4 LEU A 113 LYS A 131 1 19 HELIX 5 5 GLN A 150 SER A 172 1 23 HELIX 6 6 ALA A 202 ILE A 206 5 5 HELIX 7 7 THR A 213 SER A 226 1 14 HELIX 8 8 ARG B 25 GLY B 39 1 15 HELIX 9 9 ASP B 64 GLY B 80 1 17 HELIX 10 10 THR B 101 LEU B 113 1 13 HELIX 11 11 LEU B 113 ASN B 130 1 18 HELIX 12 12 GLN B 150 SER B 172 1 23 HELIX 13 13 THR B 213 SER B 226 1 14 HELIX 14 14 GLU B 227 SER B 230 5 4 SHEET 1 A 7 PHE A 56 GLU A 59 0 SHEET 2 A 7 LYS A 41 HIS A 46 1 N VAL A 44 O PHE A 56 SHEET 3 A 7 SER A 17 VAL A 20 1 N VAL A 18 O LYS A 41 SHEET 4 A 7 VAL A 84 ASN A 88 1 O VAL A 86 N LEU A 19 SHEET 5 A 7 GLY A 133 ILE A 138 1 O ILE A 136 N LEU A 85 SHEET 6 A 7 VAL A 176 PRO A 183 1 O VAL A 181 N PHE A 137 SHEET 7 A 7 VAL A 236 VAL A 239 1 O ILE A 237 N VAL A 180 SHEET 1 B 7 PHE B 56 GLU B 59 0 SHEET 2 B 7 LYS B 41 HIS B 46 1 N VAL B 44 O PHE B 56 SHEET 3 B 7 SER B 17 VAL B 20 1 N VAL B 18 O LYS B 41 SHEET 4 B 7 VAL B 84 ASN B 88 1 O VAL B 86 N LEU B 19 SHEET 5 B 7 GLY B 133 ILE B 138 1 O ILE B 136 N LEU B 85 SHEET 6 B 7 VAL B 176 PRO B 183 1 O THR B 177 N MET B 135 SHEET 7 B 7 VAL B 236 VAL B 239 1 O VAL B 239 N ALA B 182 CRYST1 81.613 117.285 52.272 90.00 121.90 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012253 0.000000 0.007627 0.00000 SCALE2 0.000000 0.008526 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022534 0.00000