PDB Short entry for 2NZJ HEADER SIGNALING PROTEIN 23-NOV-06 2NZJ TITLE THE CRYSTAL STRUCTURE OF REM1 IN COMPLEX WITH GDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING PROTEIN REM 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: RAD AND GEM-LIKE GTP-BINDING PROTEIN 1, GTPASE-REGULATING COMPND 5 ENDOTHELIAL CELL SPROUTING; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: REM1, GES, REM; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3/ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS REM1, GDP/GTP BINDING, GTP HYDROLYSIS, RAD AND GEM LIKE GTP BINDING KEYWDS 2 PROTEIN 1, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 3 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.P.TURNBULL,E.PAPAGRIGORIOU,E.UGOCHUKWU,J.M.ELKINS,M.SOUNDARARAJAN, AUTHOR 2 X.YANG,F.GORREC,C.UMEANO,E.SALAH,N.BURGESS,C.JOHANSSON,G.BERRIDGE, AUTHOR 3 O.GILEADI,J.BRAY,B.MARSDEN,S.WATTS,F.VON DELFT,J.WEIGELT,A.EDWARDS, AUTHOR 4 C.H.ARROWSMITH,M.SUNDSTROM,D.DOYLE,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 5 (SGC) REVDAT 5 30-AUG-23 2NZJ 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 2NZJ 1 VERSN REVDAT 3 24-FEB-09 2NZJ 1 VERSN REVDAT 2 19-DEC-06 2NZJ 1 AUTHOR REVDAT 1 12-DEC-06 2NZJ 0 JRNL AUTH A.P.TURNBULL,E.PAPAGRIGORIOU,E.UGOCHUKWU,J.M.ELKINS, JRNL AUTH 2 M.SOUNDARARAJAN,X.YANG,F.GORREC,C.UMEANO,E.SALAH,N.BURGESS, JRNL AUTH 3 C.JOHANSSON,G.BERRIDGE,O.GILEADI,J.BRAY,B.MARSDEN,S.WATTS, JRNL AUTH 4 F.VON DELFT,J.WEIGELT,A.EDWARDS,C.H.ARROWSMITH,M.SUNDSTROM, JRNL AUTH 5 D.DOYLE JRNL TITL THE CRYSTAL STRUCTURE OF REM1 IN COMPLEX WITH GDP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 24187 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1284 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1653 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4651 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 118 REMARK 3 SOLVENT ATOMS : 16 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -1.74000 REMARK 3 B33 (A**2) : 1.72000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.564 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.321 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.243 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.523 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4827 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3087 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6572 ; 1.359 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7489 ; 0.925 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 616 ; 6.662 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;33.775 ;22.796 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 743 ;14.922 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;16.082 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 795 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5353 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1009 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 864 ; 0.208 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3126 ; 0.197 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2336 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2588 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 118 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 11 ; 0.121 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.156 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 53 ; 0.237 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.147 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3156 ; 0.499 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1294 ; 0.094 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4913 ; 0.880 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1928 ; 1.213 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1659 ; 1.887 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 5 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 81 A 101 2 REMARK 3 1 B 81 B 101 2 REMARK 3 1 C 81 C 101 2 REMARK 3 1 D 81 D 101 2 REMARK 3 2 A 117 A 136 2 REMARK 3 2 B 117 B 136 2 REMARK 3 2 C 117 C 136 2 REMARK 3 2 D 117 D 136 2 REMARK 3 3 A 154 A 170 2 REMARK 3 3 B 154 B 170 2 REMARK 3 3 C 154 C 170 2 REMARK 3 3 D 154 D 170 2 REMARK 3 4 A 189 A 199 2 REMARK 3 4 B 189 B 199 2 REMARK 3 4 C 189 C 199 2 REMARK 3 4 D 189 D 199 2 REMARK 3 5 A 220 A 244 2 REMARK 3 5 B 220 B 244 2 REMARK 3 5 C 220 C 244 2 REMARK 3 5 D 220 D 244 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 554 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 554 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 554 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 554 ; 0.04 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 631 ; 0.24 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 631 ; 0.33 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 631 ; 0.25 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 631 ; 0.28 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 554 ; 0.07 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 554 ; 0.08 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 554 ; 0.08 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 554 ; 0.07 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 631 ; 0.38 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 631 ; 0.41 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 631 ; 0.41 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 631 ; 0.38 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 182 C 188 2 REMARK 3 1 D 182 D 188 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 C (A): 42 ; 0.03 ; 0.05 REMARK 3 MEDIUM POSITIONAL 2 C (A): 30 ; 0.61 ; 0.50 REMARK 3 TIGHT THERMAL 2 C (A**2): 42 ; 0.07 ; 0.50 REMARK 3 MEDIUM THERMAL 2 C (A**2): 30 ; 0.26 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 110 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1213 8.5536 -19.7061 REMARK 3 T TENSOR REMARK 3 T11: 0.1769 T22: 0.1386 REMARK 3 T33: 0.1929 T12: -0.0062 REMARK 3 T13: -0.0390 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 2.7754 L22: 3.3211 REMARK 3 L33: 1.7750 L12: 3.0356 REMARK 3 L13: -1.4760 L23: -1.6448 REMARK 3 S TENSOR REMARK 3 S11: -0.0443 S12: -0.3524 S13: 0.0471 REMARK 3 S21: 0.2036 S22: 0.0265 S23: 0.1761 REMARK 3 S31: 0.0678 S32: 0.0209 S33: 0.0178 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1698 8.1241 -24.7781 REMARK 3 T TENSOR REMARK 3 T11: 0.3825 T22: 0.2012 REMARK 3 T33: 0.3623 T12: -0.0010 REMARK 3 T13: -0.0263 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 2.2222 L22: 2.4599 REMARK 3 L33: 2.2981 L12: 2.0888 REMARK 3 L13: -1.7439 L23: -0.9598 REMARK 3 S TENSOR REMARK 3 S11: -0.1169 S12: -0.1458 S13: -0.1781 REMARK 3 S21: -0.3044 S22: 0.0614 S23: 0.0933 REMARK 3 S31: 0.3039 S32: -0.0030 S33: 0.0554 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 173 A 248 REMARK 3 ORIGIN FOR THE GROUP (A): -16.2002 17.1990 -30.0004 REMARK 3 T TENSOR REMARK 3 T11: 0.0694 T22: -0.0424 REMARK 3 T33: 0.0908 T12: -0.0224 REMARK 3 T13: -0.0040 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 3.4588 L22: 3.1918 REMARK 3 L33: 4.3591 L12: 0.7661 REMARK 3 L13: -1.1514 L23: -0.9848 REMARK 3 S TENSOR REMARK 3 S11: -0.1116 S12: 0.2132 S13: 0.1810 REMARK 3 S21: -0.4498 S22: 0.1531 S23: 0.2218 REMARK 3 S31: 0.2238 S32: -0.0714 S33: -0.0414 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 111 REMARK 3 ORIGIN FOR THE GROUP (A): -1.3818 7.5387 -67.1037 REMARK 3 T TENSOR REMARK 3 T11: 0.2882 T22: 0.2160 REMARK 3 T33: 0.2160 T12: -0.0163 REMARK 3 T13: 0.0487 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 3.7792 L22: 5.7782 REMARK 3 L33: 0.8289 L12: -4.1289 REMARK 3 L13: -0.4254 L23: 1.4596 REMARK 3 S TENSOR REMARK 3 S11: 0.2157 S12: 0.6322 S13: -0.2884 REMARK 3 S21: -0.7467 S22: -0.2890 S23: -0.2099 REMARK 3 S31: 0.0165 S32: 0.1736 S33: 0.0733 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 112 B 171 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1876 8.1494 -59.7147 REMARK 3 T TENSOR REMARK 3 T11: 0.4063 T22: 0.2395 REMARK 3 T33: 0.3924 T12: -0.0145 REMARK 3 T13: 0.0299 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 3.6171 L22: 2.1298 REMARK 3 L33: 1.5704 L12: -1.3509 REMARK 3 L13: -2.1528 L23: 0.4489 REMARK 3 S TENSOR REMARK 3 S11: -0.1924 S12: 0.1203 S13: -0.5552 REMARK 3 S21: 0.1231 S22: -0.0322 S23: -0.1023 REMARK 3 S31: 0.2304 S32: 0.0022 S33: 0.2247 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 172 B 248 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8694 17.1766 -54.4655 REMARK 3 T TENSOR REMARK 3 T11: 0.0929 T22: -0.0555 REMARK 3 T33: 0.0892 T12: -0.0182 REMARK 3 T13: 0.0240 T23: -0.0382 REMARK 3 L TENSOR REMARK 3 L11: 3.7546 L22: 3.5573 REMARK 3 L33: 3.6518 L12: -1.0868 REMARK 3 L13: -1.3302 L23: 0.0921 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: -0.4050 S13: 0.0862 REMARK 3 S21: 0.2485 S22: 0.0914 S23: -0.2041 REMARK 3 S31: 0.1725 S32: 0.2141 S33: -0.0717 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 111 REMARK 3 ORIGIN FOR THE GROUP (A): -7.2705 35.8734 -60.1600 REMARK 3 T TENSOR REMARK 3 T11: 0.2388 T22: 0.2343 REMARK 3 T33: 0.2093 T12: 0.0310 REMARK 3 T13: -0.0029 T23: -0.0487 REMARK 3 L TENSOR REMARK 3 L11: 1.4026 L22: 4.9497 REMARK 3 L33: 0.8450 L12: 0.3464 REMARK 3 L13: 0.7766 L23: -0.9212 REMARK 3 S TENSOR REMARK 3 S11: -0.0792 S12: -0.2707 S13: -0.1968 REMARK 3 S21: 0.6383 S22: 0.2183 S23: -0.1282 REMARK 3 S31: -0.0603 S32: -0.1695 S33: -0.1391 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 112 C 171 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0816 36.0170 -65.5464 REMARK 3 T TENSOR REMARK 3 T11: 0.3910 T22: 0.2751 REMARK 3 T33: 0.3303 T12: 0.0298 REMARK 3 T13: -0.0497 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.1957 L22: 5.6515 REMARK 3 L33: 1.5731 L12: -0.8272 REMARK 3 L13: -0.3818 L23: 0.2786 REMARK 3 S TENSOR REMARK 3 S11: -0.0522 S12: 0.0968 S13: -0.2760 REMARK 3 S21: 0.1121 S22: 0.0391 S23: -0.3434 REMARK 3 S31: 0.1823 S32: 0.2056 S33: 0.0131 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 172 C 247 REMARK 3 ORIGIN FOR THE GROUP (A): -10.8628 45.3423 -70.6130 REMARK 3 T TENSOR REMARK 3 T11: 0.1258 T22: -0.0120 REMARK 3 T33: 0.0432 T12: 0.0319 REMARK 3 T13: -0.0183 T23: 0.0599 REMARK 3 L TENSOR REMARK 3 L11: 3.8344 L22: 7.5708 REMARK 3 L33: 2.7945 L12: 1.6996 REMARK 3 L13: -0.4913 L23: 0.8024 REMARK 3 S TENSOR REMARK 3 S11: -0.1158 S12: 0.2446 S13: 0.0946 REMARK 3 S21: -0.5997 S22: 0.0697 S23: 0.2609 REMARK 3 S31: 0.0500 S32: 0.0817 S33: 0.0461 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 0 D 111 REMARK 3 ORIGIN FOR THE GROUP (A): -13.7117 36.2788 -20.8268 REMARK 3 T TENSOR REMARK 3 T11: 0.3604 T22: 0.1882 REMARK 3 T33: 0.1801 T12: -0.0630 REMARK 3 T13: -0.1139 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 6.0176 L22: 7.3054 REMARK 3 L33: 4.3383 L12: -3.5267 REMARK 3 L13: 1.4627 L23: -0.4565 REMARK 3 S TENSOR REMARK 3 S11: 0.5568 S12: 0.1222 S13: -0.2330 REMARK 3 S21: -1.0308 S22: -0.1449 S23: 0.1356 REMARK 3 S31: 0.3779 S32: -0.0915 S33: -0.4119 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 112 D 170 REMARK 3 ORIGIN FOR THE GROUP (A): -13.9869 35.5745 -17.1984 REMARK 3 T TENSOR REMARK 3 T11: 0.4299 T22: 0.2966 REMARK 3 T33: 0.3117 T12: -0.0396 REMARK 3 T13: -0.0224 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 0.5537 L22: 8.1265 REMARK 3 L33: 2.7155 L12: -0.7056 REMARK 3 L13: -0.8693 L23: -0.6399 REMARK 3 S TENSOR REMARK 3 S11: -0.0695 S12: 0.0564 S13: -0.2993 REMARK 3 S21: -0.4363 S22: -0.0925 S23: 0.2665 REMARK 3 S31: 0.2587 S32: -0.2184 S33: 0.1619 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 171 D 246 REMARK 3 ORIGIN FOR THE GROUP (A): -11.4911 44.6339 -10.9189 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.0037 REMARK 3 T33: 0.0281 T12: -0.0323 REMARK 3 T13: -0.0615 T23: -0.0471 REMARK 3 L TENSOR REMARK 3 L11: 4.0189 L22: 10.4685 REMARK 3 L33: 3.5848 L12: -2.7086 REMARK 3 L13: -0.7240 L23: -1.7964 REMARK 3 S TENSOR REMARK 3 S11: -0.1408 S12: -0.2296 S13: 0.2003 REMARK 3 S21: 0.7089 S22: 0.2771 S23: -0.4495 REMARK 3 S31: 0.0059 S32: -0.2642 S33: -0.1362 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2NZJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040497. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25510 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2G3Y, 2GJS, 2DPX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 34 % (W/V) PEG3350, 0.26M NACL, 0.1 M REMARK 280 HEPES, PH 7.7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.82000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.78250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.14200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.78250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.82000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.14200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -43.64000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -51.14200 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -82.78250 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 GLN A 104 REMARK 465 GLU A 105 REMARK 465 ARG A 106 REMARK 465 ASP A 107 REMARK 465 LEU A 108 REMARK 465 GLU A 137 REMARK 465 ALA A 138 REMARK 465 GLU A 139 REMARK 465 LYS A 140 REMARK 465 LEU A 141 REMARK 465 ASP A 142 REMARK 465 LYS A 143 REMARK 465 HIS A 183 REMARK 465 GLN A 184 REMARK 465 ALA A 185 REMARK 465 ASP A 186 REMARK 465 ASP A 249 REMARK 465 SER A 250 REMARK 465 ALA A 251 REMARK 465 SER B -1 REMARK 465 ALA B 138 REMARK 465 GLU B 139 REMARK 465 LYS B 140 REMARK 465 LEU B 141 REMARK 465 ASP B 142 REMARK 465 LYS B 143 REMARK 465 HIS B 183 REMARK 465 GLN B 184 REMARK 465 ALA B 185 REMARK 465 ASP B 186 REMARK 465 HIS B 187 REMARK 465 ASP B 249 REMARK 465 SER B 250 REMARK 465 ALA B 251 REMARK 465 SER C -1 REMARK 465 GLN C 104 REMARK 465 GLU C 105 REMARK 465 ARG C 106 REMARK 465 ASP C 107 REMARK 465 LEU C 108 REMARK 465 ALA C 138 REMARK 465 GLU C 139 REMARK 465 LYS C 140 REMARK 465 LEU C 141 REMARK 465 ASP C 142 REMARK 465 LYS C 143 REMARK 465 ARG C 248 REMARK 465 ASP C 249 REMARK 465 SER C 250 REMARK 465 ALA C 251 REMARK 465 SER D -1 REMARK 465 LYS D 103 REMARK 465 GLN D 104 REMARK 465 GLU D 105 REMARK 465 ARG D 106 REMARK 465 ASP D 107 REMARK 465 LEU D 108 REMARK 465 HIS D 109 REMARK 465 GLU D 110 REMARK 465 ALA D 138 REMARK 465 GLU D 139 REMARK 465 LYS D 140 REMARK 465 LEU D 141 REMARK 465 ASP D 142 REMARK 465 LYS D 143 REMARK 465 ARG D 247 REMARK 465 ARG D 248 REMARK 465 ASP D 249 REMARK 465 SER D 250 REMARK 465 ALA D 251 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 GLN A 111 CG CD OE1 NE2 REMARK 470 GLU A 114 CG CD OE1 OE2 REMARK 470 GLU A 118 CG CD OE1 OE2 REMARK 470 GLU A 148 CD OE1 OE2 REMARK 470 SER A 149 OG REMARK 470 GLN A 152 CG CD OE1 NE2 REMARK 470 GLU A 174 CD OE1 OE2 REMARK 470 ARG A 181 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 187 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 201 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 217 CE1 CE2 CZ REMARK 470 ASP A 218 CG OD1 OD2 REMARK 470 LYS A 220 NZ REMARK 470 ARG A 246 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 247 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 248 CD NE CZ NH1 NH2 REMARK 470 LYS B 103 CG CD CE NZ REMARK 470 GLN B 104 CG CD OE1 NE2 REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 ASP B 107 CG OD1 OD2 REMARK 470 GLN B 111 CB CG CD OE1 NE2 REMARK 470 GLU B 114 CG CD OE1 OE2 REMARK 470 GLU B 118 CD OE1 OE2 REMARK 470 GLU B 137 CG CD OE1 OE2 REMARK 470 SER B 144 OG REMARK 470 GLN B 147 CG CD OE1 NE2 REMARK 470 GLU B 148 CG CD OE1 OE2 REMARK 470 GLN B 152 CG CD OE1 NE2 REMARK 470 SER B 171 OG REMARK 470 GLU B 174 CG CD OE1 OE2 REMARK 470 ARG B 181 CD NE CZ NH1 NH2 REMARK 470 THR B 182 OG1 CG2 REMARK 470 ARG B 201 CD NE CZ NH1 NH2 REMARK 470 PHE B 217 CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 247 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 103 CG CD CE NZ REMARK 470 GLU C 114 CD OE1 OE2 REMARK 470 GLU C 137 CG CD OE1 OE2 REMARK 470 GLU C 148 CD OE1 OE2 REMARK 470 LEU C 151 CG CD1 CD2 REMARK 470 GLN C 152 CG CD OE1 NE2 REMARK 470 GLU C 174 CD OE1 OE2 REMARK 470 ARG C 181 CD NE CZ NH1 NH2 REMARK 470 ASP C 186 CG OD1 OD2 REMARK 470 HIS C 187 ND1 CD2 CE1 NE2 REMARK 470 GLU C 208 CG CD OE1 OE2 REMARK 470 LYS C 220 NZ REMARK 470 ARG C 246 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 247 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 111 CG CD OE1 NE2 REMARK 470 LEU D 112 CG CD1 CD2 REMARK 470 GLU D 114 CG CD OE1 OE2 REMARK 470 VAL D 116 CG1 CG2 REMARK 470 GLU D 137 CG CD OE1 OE2 REMARK 470 SER D 149 OG REMARK 470 LEU D 151 CG CD1 CD2 REMARK 470 GLN D 152 CD OE1 NE2 REMARK 470 GLU D 170 CD OE1 OE2 REMARK 470 GLU D 174 CD OE1 OE2 REMARK 470 ARG D 181 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 186 CG OD1 OD2 REMARK 470 HIS D 187 CG ND1 CD2 CE1 NE2 REMARK 470 LYS D 220 NZ REMARK 470 LEU D 228 CD1 CD2 REMARK 470 ARG D 246 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 203 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 115 49.80 -109.46 REMARK 500 LEU A 199 49.32 -84.59 REMARK 500 ARG A 203 115.87 -29.23 REMARK 500 ALA B 79 163.47 178.91 REMARK 500 ARG B 203 125.69 -36.24 REMARK 500 LYS D 196 33.95 70.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 101 GLY B 102 -125.43 REMARK 500 LEU D 112 GLY D 113 132.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 252 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 1 O REMARK 620 2 HOH A 2 O 82.3 REMARK 620 3 HOH A 3 O 92.5 172.9 REMARK 620 4 HOH A 4 O 85.9 80.4 104.2 REMARK 620 5 THR A 94 OG1 84.9 80.9 93.9 160.1 REMARK 620 6 GDP A1001 O2B 170.6 90.4 94.2 98.8 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 252 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 5 O REMARK 620 2 HOH B 6 O 83.1 REMARK 620 3 HOH B 7 O 151.0 125.4 REMARK 620 4 HOH B 8 O 89.2 102.1 79.8 REMARK 620 5 THR B 94 OG1 75.2 157.7 75.9 73.1 REMARK 620 6 GDP B1002 O3B 102.7 51.6 100.6 148.3 138.2 REMARK 620 7 GDP B1002 O2B 92.6 99.4 88.4 158.5 86.7 51.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 252 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 9 O REMARK 620 2 HOH C 10 O 82.7 REMARK 620 3 HOH C 11 O 97.9 80.7 REMARK 620 4 HOH C 12 O 152.7 70.2 82.0 REMARK 620 5 THR C 94 OG1 103.9 172.0 93.9 103.4 REMARK 620 6 GDP C1003 O2B 92.8 80.7 157.1 79.3 103.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 252 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH D 13 O REMARK 620 2 HOH D 14 O 97.6 REMARK 620 3 HOH D 15 O 97.9 93.9 REMARK 620 4 HOH D 16 O 166.3 83.6 95.6 REMARK 620 5 THR D 94 OG1 91.8 81.0 169.6 74.9 REMARK 620 6 GDP D1004 O2B 97.1 163.0 92.3 80.1 90.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP C 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP D 1004 DBREF 2NZJ A 79 251 UNP O75628 REM1_HUMAN 79 251 DBREF 2NZJ B 79 251 UNP O75628 REM1_HUMAN 79 251 DBREF 2NZJ C 79 251 UNP O75628 REM1_HUMAN 79 251 DBREF 2NZJ D 79 251 UNP O75628 REM1_HUMAN 79 251 SEQADV 2NZJ SER A -1 UNP O75628 CLONING ARTIFACT SEQADV 2NZJ MET A 0 UNP O75628 CLONING ARTIFACT SEQADV 2NZJ SER B -1 UNP O75628 CLONING ARTIFACT SEQADV 2NZJ MET B 0 UNP O75628 CLONING ARTIFACT SEQADV 2NZJ SER C -1 UNP O75628 CLONING ARTIFACT SEQADV 2NZJ MET C 0 UNP O75628 CLONING ARTIFACT SEQADV 2NZJ SER D -1 UNP O75628 CLONING ARTIFACT SEQADV 2NZJ MET D 0 UNP O75628 CLONING ARTIFACT SEQRES 1 A 175 SER MET ALA LEU TYR ARG VAL VAL LEU LEU GLY ASP PRO SEQRES 2 A 175 GLY VAL GLY LYS THR SER LEU ALA SER LEU PHE ALA GLY SEQRES 3 A 175 LYS GLN GLU ARG ASP LEU HIS GLU GLN LEU GLY GLU ASP SEQRES 4 A 175 VAL TYR GLU ARG THR LEU THR VAL ASP GLY GLU ASP THR SEQRES 5 A 175 THR LEU VAL VAL VAL ASP THR TRP GLU ALA GLU LYS LEU SEQRES 6 A 175 ASP LYS SER TRP SER GLN GLU SER CYS LEU GLN GLY GLY SEQRES 7 A 175 SER ALA TYR VAL ILE VAL TYR SER ILE ALA ASP ARG GLY SEQRES 8 A 175 SER PHE GLU SER ALA SER GLU LEU ARG ILE GLN LEU ARG SEQRES 9 A 175 ARG THR HIS GLN ALA ASP HIS VAL PRO ILE ILE LEU VAL SEQRES 10 A 175 GLY ASN LYS ALA ASP LEU ALA ARG CYS ARG GLU VAL SER SEQRES 11 A 175 VAL GLU GLU GLY ARG ALA CYS ALA VAL VAL PHE ASP CYS SEQRES 12 A 175 LYS PHE ILE GLU THR SER ALA THR LEU GLN HIS ASN VAL SEQRES 13 A 175 ALA GLU LEU PHE GLU GLY VAL VAL ARG GLN LEU ARG LEU SEQRES 14 A 175 ARG ARG ARG ASP SER ALA SEQRES 1 B 175 SER MET ALA LEU TYR ARG VAL VAL LEU LEU GLY ASP PRO SEQRES 2 B 175 GLY VAL GLY LYS THR SER LEU ALA SER LEU PHE ALA GLY SEQRES 3 B 175 LYS GLN GLU ARG ASP LEU HIS GLU GLN LEU GLY GLU ASP SEQRES 4 B 175 VAL TYR GLU ARG THR LEU THR VAL ASP GLY GLU ASP THR SEQRES 5 B 175 THR LEU VAL VAL VAL ASP THR TRP GLU ALA GLU LYS LEU SEQRES 6 B 175 ASP LYS SER TRP SER GLN GLU SER CYS LEU GLN GLY GLY SEQRES 7 B 175 SER ALA TYR VAL ILE VAL TYR SER ILE ALA ASP ARG GLY SEQRES 8 B 175 SER PHE GLU SER ALA SER GLU LEU ARG ILE GLN LEU ARG SEQRES 9 B 175 ARG THR HIS GLN ALA ASP HIS VAL PRO ILE ILE LEU VAL SEQRES 10 B 175 GLY ASN LYS ALA ASP LEU ALA ARG CYS ARG GLU VAL SER SEQRES 11 B 175 VAL GLU GLU GLY ARG ALA CYS ALA VAL VAL PHE ASP CYS SEQRES 12 B 175 LYS PHE ILE GLU THR SER ALA THR LEU GLN HIS ASN VAL SEQRES 13 B 175 ALA GLU LEU PHE GLU GLY VAL VAL ARG GLN LEU ARG LEU SEQRES 14 B 175 ARG ARG ARG ASP SER ALA SEQRES 1 C 175 SER MET ALA LEU TYR ARG VAL VAL LEU LEU GLY ASP PRO SEQRES 2 C 175 GLY VAL GLY LYS THR SER LEU ALA SER LEU PHE ALA GLY SEQRES 3 C 175 LYS GLN GLU ARG ASP LEU HIS GLU GLN LEU GLY GLU ASP SEQRES 4 C 175 VAL TYR GLU ARG THR LEU THR VAL ASP GLY GLU ASP THR SEQRES 5 C 175 THR LEU VAL VAL VAL ASP THR TRP GLU ALA GLU LYS LEU SEQRES 6 C 175 ASP LYS SER TRP SER GLN GLU SER CYS LEU GLN GLY GLY SEQRES 7 C 175 SER ALA TYR VAL ILE VAL TYR SER ILE ALA ASP ARG GLY SEQRES 8 C 175 SER PHE GLU SER ALA SER GLU LEU ARG ILE GLN LEU ARG SEQRES 9 C 175 ARG THR HIS GLN ALA ASP HIS VAL PRO ILE ILE LEU VAL SEQRES 10 C 175 GLY ASN LYS ALA ASP LEU ALA ARG CYS ARG GLU VAL SER SEQRES 11 C 175 VAL GLU GLU GLY ARG ALA CYS ALA VAL VAL PHE ASP CYS SEQRES 12 C 175 LYS PHE ILE GLU THR SER ALA THR LEU GLN HIS ASN VAL SEQRES 13 C 175 ALA GLU LEU PHE GLU GLY VAL VAL ARG GLN LEU ARG LEU SEQRES 14 C 175 ARG ARG ARG ASP SER ALA SEQRES 1 D 175 SER MET ALA LEU TYR ARG VAL VAL LEU LEU GLY ASP PRO SEQRES 2 D 175 GLY VAL GLY LYS THR SER LEU ALA SER LEU PHE ALA GLY SEQRES 3 D 175 LYS GLN GLU ARG ASP LEU HIS GLU GLN LEU GLY GLU ASP SEQRES 4 D 175 VAL TYR GLU ARG THR LEU THR VAL ASP GLY GLU ASP THR SEQRES 5 D 175 THR LEU VAL VAL VAL ASP THR TRP GLU ALA GLU LYS LEU SEQRES 6 D 175 ASP LYS SER TRP SER GLN GLU SER CYS LEU GLN GLY GLY SEQRES 7 D 175 SER ALA TYR VAL ILE VAL TYR SER ILE ALA ASP ARG GLY SEQRES 8 D 175 SER PHE GLU SER ALA SER GLU LEU ARG ILE GLN LEU ARG SEQRES 9 D 175 ARG THR HIS GLN ALA ASP HIS VAL PRO ILE ILE LEU VAL SEQRES 10 D 175 GLY ASN LYS ALA ASP LEU ALA ARG CYS ARG GLU VAL SER SEQRES 11 D 175 VAL GLU GLU GLY ARG ALA CYS ALA VAL VAL PHE ASP CYS SEQRES 12 D 175 LYS PHE ILE GLU THR SER ALA THR LEU GLN HIS ASN VAL SEQRES 13 D 175 ALA GLU LEU PHE GLU GLY VAL VAL ARG GLN LEU ARG LEU SEQRES 14 D 175 ARG ARG ARG ASP SER ALA HET MG A 252 1 HET CL A 253 1 HET GDP A1001 28 HET MG B 252 1 HET CL B 253 1 HET GDP B1002 28 HET MG C 252 1 HET GDP C1003 28 HET MG D 252 1 HET GDP D1004 28 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 5 MG 4(MG 2+) FORMUL 6 CL 2(CL 1-) FORMUL 7 GDP 4(C10 H15 N5 O11 P2) FORMUL 15 HOH *16(H2 O) HELIX 1 1 GLY A 92 GLY A 102 1 11 HELIX 2 2 SER A 144 CYS A 150 1 7 HELIX 3 3 ASP A 165 THR A 182 1 18 HELIX 4 4 SER A 206 ASP A 218 1 13 HELIX 5 5 ASN A 231 ARG A 248 1 18 HELIX 6 6 GLY B 92 GLY B 102 1 11 HELIX 7 7 SER B 144 CYS B 150 1 7 HELIX 8 8 ASP B 165 THR B 182 1 18 HELIX 9 9 LEU B 199 ARG B 203 5 5 HELIX 10 10 SER B 206 ASP B 218 1 13 HELIX 11 11 ASN B 231 ARG B 248 1 18 HELIX 12 12 GLY C 92 GLY C 102 1 11 HELIX 13 13 SER C 144 SER C 149 1 6 HELIX 14 14 ASP C 165 ARG C 181 1 17 HELIX 15 15 LEU C 199 ARG C 203 5 5 HELIX 16 16 SER C 206 VAL C 216 1 11 HELIX 17 17 ASN C 231 ARG C 246 1 16 HELIX 18 18 GLY D 92 GLY D 102 1 11 HELIX 19 19 SER D 144 GLY D 153 1 10 HELIX 20 20 ASP D 165 ARG D 181 1 17 HELIX 21 21 LEU D 199 ARG D 203 5 5 HELIX 22 22 SER D 206 PHE D 217 1 12 HELIX 23 23 ASN D 231 ARG D 246 1 16 SHEET 1 A 6 VAL A 116 VAL A 123 0 SHEET 2 A 6 GLU A 126 VAL A 133 -1 O THR A 128 N LEU A 121 SHEET 3 A 6 LEU A 80 LEU A 86 1 N VAL A 83 O VAL A 133 SHEET 4 A 6 ALA A 156 SER A 162 1 O VAL A 160 N LEU A 86 SHEET 5 A 6 ILE A 190 ASN A 195 1 O ASN A 195 N TYR A 161 SHEET 6 A 6 LYS A 220 GLU A 223 1 O LYS A 220 N LEU A 192 SHEET 1 B 6 VAL B 116 VAL B 123 0 SHEET 2 B 6 GLU B 126 VAL B 133 -1 O VAL B 132 N TYR B 117 SHEET 3 B 6 LEU B 80 LEU B 86 1 N VAL B 83 O VAL B 131 SHEET 4 B 6 ALA B 156 SER B 162 1 O VAL B 160 N LEU B 86 SHEET 5 B 6 ILE B 190 ASN B 195 1 O ASN B 195 N TYR B 161 SHEET 6 B 6 LYS B 220 GLU B 223 1 O LYS B 220 N LEU B 192 SHEET 1 C 6 VAL C 116 VAL C 123 0 SHEET 2 C 6 GLU C 126 VAL C 133 -1 O VAL C 132 N TYR C 117 SHEET 3 C 6 LEU C 80 LEU C 86 1 N VAL C 83 O VAL C 131 SHEET 4 C 6 ALA C 156 SER C 162 1 O VAL C 160 N LEU C 86 SHEET 5 C 6 ILE C 190 ASN C 195 1 O ASN C 195 N TYR C 161 SHEET 6 C 6 LYS C 220 GLU C 223 1 O LYS C 220 N LEU C 192 SHEET 1 D 6 VAL D 116 VAL D 123 0 SHEET 2 D 6 GLU D 126 VAL D 133 -1 O VAL D 132 N TYR D 117 SHEET 3 D 6 LEU D 80 LEU D 86 1 N VAL D 83 O VAL D 131 SHEET 4 D 6 ALA D 156 SER D 162 1 O VAL D 160 N LEU D 86 SHEET 5 D 6 ILE D 190 ASN D 195 1 O ASN D 195 N TYR D 161 SHEET 6 D 6 LYS D 220 GLU D 223 1 O LYS D 220 N LEU D 192 LINK O HOH A 1 MG MG A 252 1555 1555 2.05 LINK O HOH A 2 MG MG A 252 1555 1555 2.04 LINK O HOH A 3 MG MG A 252 1555 1555 1.81 LINK O HOH A 4 MG MG A 252 1555 1555 1.88 LINK OG1 THR A 94 MG MG A 252 1555 1555 2.16 LINK MG MG A 252 O2B GDP A1001 1555 1555 2.13 LINK O HOH B 5 MG MG B 252 1555 1555 2.16 LINK O HOH B 6 MG MG B 252 1555 1555 1.98 LINK O HOH B 7 MG MG B 252 1555 1555 2.02 LINK O HOH B 8 MG MG B 252 1555 1555 1.96 LINK OG1 THR B 94 MG MG B 252 1555 1555 2.35 LINK MG MG B 252 O3B GDP B1002 1555 1555 3.15 LINK MG MG B 252 O2B GDP B1002 1555 1555 2.07 LINK O HOH C 9 MG MG C 252 1555 1555 1.97 LINK O HOH C 10 MG MG C 252 1555 1555 1.97 LINK O HOH C 11 MG MG C 252 1555 1555 2.12 LINK O HOH C 12 MG MG C 252 1555 1555 2.04 LINK OG1 THR C 94 MG MG C 252 1555 1555 1.84 LINK MG MG C 252 O2B GDP C1003 1555 1555 2.16 LINK O HOH D 13 MG MG D 252 1555 1555 1.81 LINK O HOH D 14 MG MG D 252 1555 1555 1.84 LINK O HOH D 15 MG MG D 252 1555 1555 1.80 LINK O HOH D 16 MG MG D 252 1555 1555 2.04 LINK OG1 THR D 94 MG MG D 252 1555 1555 2.17 LINK MG MG D 252 O2B GDP D1004 1555 1555 1.97 SITE 1 AC1 6 HOH A 1 HOH A 2 HOH A 3 HOH A 4 SITE 2 AC1 6 THR A 94 GDP A1001 SITE 1 AC2 6 HOH B 5 HOH B 6 HOH B 7 HOH B 8 SITE 2 AC2 6 THR B 94 GDP B1002 SITE 1 AC3 6 HOH C 9 HOH C 10 HOH C 11 HOH C 12 SITE 2 AC3 6 THR C 94 GDP C1003 SITE 1 AC4 6 HOH D 13 HOH D 14 HOH D 15 HOH D 16 SITE 2 AC4 6 THR D 94 GDP D1004 SITE 1 AC5 2 SER B 162 LYS B 196 SITE 1 AC6 2 SER A 162 LYS A 196 SITE 1 AC7 17 HOH A 2 HOH A 3 HOH A 4 GLY A 90 SITE 2 AC7 17 VAL A 91 GLY A 92 LYS A 93 THR A 94 SITE 3 AC7 17 SER A 95 ASN A 195 LYS A 196 ASP A 198 SITE 4 AC7 17 LEU A 199 SER A 225 ALA A 226 THR A 227 SITE 5 AC7 17 MG A 252 SITE 1 AC8 17 HOH B 5 HOH B 6 HOH B 7 PRO B 89 SITE 2 AC8 17 GLY B 90 VAL B 91 GLY B 92 LYS B 93 SITE 3 AC8 17 THR B 94 SER B 95 ASN B 195 LYS B 196 SITE 4 AC8 17 ASP B 198 SER B 225 ALA B 226 THR B 227 SITE 5 AC8 17 MG B 252 SITE 1 AC9 18 HOH C 9 HOH C 10 HOH C 12 PRO C 89 SITE 2 AC9 18 GLY C 90 VAL C 91 GLY C 92 LYS C 93 SITE 3 AC9 18 THR C 94 SER C 95 ASN C 195 LYS C 196 SITE 4 AC9 18 ASP C 198 LEU C 199 SER C 225 ALA C 226 SITE 5 AC9 18 THR C 227 MG C 252 SITE 1 BC1 17 HOH D 13 HOH D 15 HOH D 16 PRO D 89 SITE 2 BC1 17 GLY D 90 VAL D 91 GLY D 92 LYS D 93 SITE 3 BC1 17 THR D 94 SER D 95 ASN D 195 LYS D 196 SITE 4 BC1 17 ASP D 198 SER D 225 ALA D 226 THR D 227 SITE 5 BC1 17 MG D 252 CRYST1 43.640 102.284 165.565 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022915 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009777 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006040 0.00000