PDB Short entry for 2O7T HEADER TRANSCRIPTION 11-DEC-06 2O7T TITLE CRYSTAL STRUCTURE OF A TETR FAMILY TRANSCRIPTIONAL REGULATOR TITLE 2 (NCGL1578, CGL1640) FROM CORYNEBACTERIUM GLUTAMICUM AT 2.10 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BACTERIAL REGULATORY PROTEINS, TETR FAMILY; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM; SOURCE 3 ORGANISM_TAXID: 1718; SOURCE 4 GENE: NP_600854.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TRANSCRIPTION REGULATOR, DNA/RNA-BINDING 3-HELICAL BUNDLE FOLD, HELIX KEYWDS 2 TURN HELIX MOTIF, HTH MOTIF, TRANSCRIPTION REGULATION, STRUCTURAL KEYWDS 3 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 4 STRUCTURE INITIATIVE, PSI-2, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 25-JAN-23 2O7T 1 REMARK SEQADV LINK REVDAT 6 25-OCT-17 2O7T 1 REMARK REVDAT 5 18-OCT-17 2O7T 1 REMARK REVDAT 4 13-JUL-11 2O7T 1 VERSN REVDAT 3 23-MAR-11 2O7T 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2O7T 1 VERSN REVDAT 1 26-DEC-06 2O7T 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR (NP_600854.1) JRNL TITL 2 FROM CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO AT 2.10 JRNL TITL 3 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12078 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 578 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 834 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 29 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1429 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : -0.39000 REMARK 3 B12 (A**2) : 0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.208 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.418 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1509 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1423 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2056 ; 1.423 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3290 ; 0.792 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 195 ; 3.198 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;30.691 ;23.036 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 238 ;11.469 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;14.291 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 252 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1645 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 291 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 350 ; 0.223 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1321 ; 0.157 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 756 ; 0.182 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 894 ; 0.087 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 98 ; 0.201 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.231 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 72 ; 0.185 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.228 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 973 ; 2.054 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 384 ; 0.525 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1549 ; 3.055 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 588 ; 5.086 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 503 ; 6.990 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 76 REMARK 3 ORIGIN FOR THE GROUP (A): 20.4996 16.5090 46.3429 REMARK 3 T TENSOR REMARK 3 T11: -0.0062 T22: -0.0739 REMARK 3 T33: -0.0650 T12: -0.0998 REMARK 3 T13: 0.0010 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 1.9065 L22: 1.5369 REMARK 3 L33: 3.4223 L12: 0.5674 REMARK 3 L13: -2.4354 L23: -0.0722 REMARK 3 S TENSOR REMARK 3 S11: -0.2760 S12: 0.2650 S13: -0.1571 REMARK 3 S21: 0.0560 S22: 0.0100 S23: 0.0945 REMARK 3 S31: 0.4592 S32: -0.4060 S33: 0.2660 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 77 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): 27.9534 33.2388 57.9635 REMARK 3 T TENSOR REMARK 3 T11: -0.0497 T22: -0.1033 REMARK 3 T33: -0.1326 T12: -0.0740 REMARK 3 T13: 0.0282 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.6792 L22: 1.0507 REMARK 3 L33: 2.7621 L12: -0.1438 REMARK 3 L13: -0.8440 L23: 1.0401 REMARK 3 S TENSOR REMARK 3 S11: 0.1532 S12: -0.2344 S13: 0.0846 REMARK 3 S21: 0.0513 S22: 0.0334 S23: -0.1630 REMARK 3 S31: -0.2105 S32: 0.2728 S33: -0.1866 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS REMARK 3 ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REMARK 3 REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. REMARK 3 4.TWO UNKNOWN LIGANDS ARE MODELED IN THE MODEL, WHICH MAY BE REMARK 3 LIPID MOLECULES. 5.RESIDUE CYS 17 MAY FORM DISULFIDE BOND WITH REMARK 3 CYS 59 UNDER NON-REDUCING ENVIROMENT. REMARK 4 REMARK 4 2O7T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040795. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92522, 0.97975 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12118 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 26.162 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : 0.08300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.68600 REMARK 200 R SYM FOR SHELL (I) : 0.68600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15.0% GLYCEROL, 0.17M NAOAC, 25.5% PEG REMARK 280 -4000, 0.1M TRIS PH 8.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.41933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.20967 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.20967 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 86.41933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 300 SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT REMARK 300 SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A REMARK 300 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 129.62900 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 202 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 189 REMARK 465 ASN A 190 REMARK 465 ILE A 191 REMARK 465 GLY A 192 REMARK 465 GLU A 193 REMARK 465 HIS A 194 REMARK 465 ASP A 195 REMARK 465 GLY A 196 REMARK 465 LYS A 197 REMARK 465 SER A 198 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 2 NH1 NH2 REMARK 470 LYS A 7 CD CE NZ REMARK 470 GLU A 10 CD OE1 OE2 REMARK 470 GLU A 35 CD OE1 OE2 REMARK 470 GLN A 90 OE1 NE2 REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 GLU A 115 CD OE1 OE2 REMARK 470 LYS A 125 CD CE NZ REMARK 470 ILE A 167 CD1 REMARK 470 GLU A 169 CD OE1 OE2 REMARK 470 LYS A 173 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 80 61.15 -168.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL A 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL A 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 370229 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET REMARK 999 SEQUENCE. DBREF 2O7T A 1 198 UNP Q8NQ14 Q8NQ14_CORGL 1 198 SEQADV 2O7T GLY A 0 UNP Q8NQ14 EXPRESSION TAG SEQADV 2O7T MSE A 1 UNP Q8NQ14 MET 1 MODIFIED RESIDUE SEQADV 2O7T MSE A 30 UNP Q8NQ14 MET 30 MODIFIED RESIDUE SEQADV 2O7T MSE A 56 UNP Q8NQ14 MET 56 MODIFIED RESIDUE SEQADV 2O7T MSE A 187 UNP Q8NQ14 MET 187 MODIFIED RESIDUE SEQADV 2O7T MSE A 188 UNP Q8NQ14 MET 188 MODIFIED RESIDUE SEQRES 1 A 199 GLY MSE ARG ALA ASP ALA LEU LYS ARG ARG GLU HIS ILE SEQRES 2 A 199 ILE THR THR THR CYS ASN LEU TYR ARG THR HIS HIS HIS SEQRES 3 A 199 ASP SER LEU THR MSE GLU ASN ILE ALA GLU GLN ALA GLY SEQRES 4 A 199 VAL GLY VAL ALA THR LEU TYR ARG ASN PHE PRO ASP ARG SEQRES 5 A 199 PHE THR LEU ASP MSE ALA CYS ALA GLN TYR LEU PHE ASN SEQRES 6 A 199 VAL VAL ILE SER LEU GLN LEU GLN ALA ILE SER THR PHE SEQRES 7 A 199 PRO THR ASP PRO GLU GLY VAL TRP THR SER PHE ASN GLN SEQRES 8 A 199 LEU LEU PHE ASP ARG GLY LEU GLY SER LEU VAL PRO ALA SEQRES 9 A 199 LEU ALA PRO GLU SER LEU ASP ASP LEU PRO ASP GLU VAL SEQRES 10 A 199 SER ALA LEU ARG ARG THR THR GLU LYS ASN THR THR THR SEQRES 11 A 199 LEU ILE ASN LEU ALA LYS GLN HIS GLY LEU VAL HIS HIS SEQRES 12 A 199 ASP ILE ALA PRO GLY THR TYR ILE VAL GLY LEU ILE THR SEQRES 13 A 199 ILE SER ARG PRO PRO ILE THR ALA LEU ALA THR ILE SER SEQRES 14 A 199 GLU ASN SER HIS LYS ALA LEU LEU GLY LEU TYR LEU SER SEQRES 15 A 199 GLY LEU LYS HIS GLY MSE MSE ALA ASN ILE GLY GLU HIS SEQRES 16 A 199 ASP GLY LYS SER MODRES 2O7T MSE A 1 MET SELENOMETHIONINE MODRES 2O7T MSE A 30 MET SELENOMETHIONINE MODRES 2O7T MSE A 56 MET SELENOMETHIONINE MODRES 2O7T MSE A 187 MET SELENOMETHIONINE MODRES 2O7T MSE A 188 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 30 8 HET MSE A 56 8 HET MSE A 187 8 HET MSE A 188 8 HET UNL A 199 17 HET UNL A 200 13 HETNAM MSE SELENOMETHIONINE HETNAM UNL UNKNOWN LIGAND FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 4 HOH *72(H2 O) HELIX 1 1 ARG A 2 HIS A 23 1 22 HELIX 2 2 HIS A 24 LEU A 28 5 5 HELIX 3 3 THR A 29 GLY A 38 1 10 HELIX 4 4 GLY A 40 PHE A 48 1 9 HELIX 5 5 ASP A 50 PHE A 77 1 28 HELIX 6 6 ASP A 80 ARG A 95 1 16 HELIX 7 7 GLY A 96 ALA A 105 1 10 HELIX 8 8 SER A 108 LEU A 112 5 5 HELIX 9 9 PRO A 113 HIS A 137 1 25 HELIX 10 10 ALA A 145 SER A 157 1 13 HELIX 11 11 ILE A 161 ALA A 165 5 5 HELIX 12 12 GLU A 169 GLY A 186 1 18 LINK C MSE A 1 N ARG A 2 1555 1555 1.33 LINK C THR A 29 N MSE A 30 1555 1555 1.31 LINK C MSE A 30 N GLU A 31 1555 1555 1.32 LINK C ASP A 55 N MSE A 56 1555 1555 1.34 LINK C MSE A 56 N ALA A 57 1555 1555 1.34 LINK C GLY A 186 N MSE A 187 1555 1555 1.32 LINK C MSE A 187 N MSE A 188 1555 1555 1.33 SITE 1 AC1 4 ARG A 21 VAL A 66 SER A 75 ARG A 95 SITE 1 AC2 1 GLU A 124 CRYST1 51.197 51.197 129.629 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019530 0.011280 0.000000 0.00000 SCALE2 0.000000 0.022550 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007710 0.00000 HETATM 1 N MSE A 1 29.754 7.109 34.211 1.00 49.43 N HETATM 2 CA MSE A 1 28.276 7.309 34.403 1.00 51.48 C HETATM 3 C MSE A 1 27.753 8.056 33.191 1.00 49.00 C HETATM 4 O MSE A 1 28.363 9.028 32.767 1.00 48.95 O HETATM 5 CB MSE A 1 27.952 8.102 35.675 1.00 51.38 C HETATM 6 CG MSE A 1 26.506 7.880 36.167 1.00 54.54 C HETATM 7 SE MSE A 1 25.891 8.957 37.720 0.75 59.98 SE HETATM 8 CE MSE A 1 24.282 8.076 38.143 1.00 58.01 C