PDB Short entry for 2Q0Z HEADER PROTEIN TRANSPORT 23-MAY-07 2Q0Z TITLE CRYSTAL STRUCTURE OF Q9P172/SEC63 FROM HOMO SAPIENS. NORTHEAST TITLE 2 STRUCTURAL GENOMICS TARGET HR1979. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PRO2281; COMPND 3 CHAIN: X; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: LIVER; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET14 KEYWDS SEC63, SEC, NESG, HR1979, STRUCTURAL GENOMICS, TRANSLOCASE, NORTHEAST KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, PSI-2, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR J.BENACH,H.NEELY,M.ABASHIDZE,W.C.EDSTROM,J.SEETHARAMAN,L.ZHAO,Y.FANG, AUTHOR 2 K.CUNNINGHAM,L.OWENS,L.-C.MA,R.XIAO,J.LIU,M.C.BARAN,T.B.ACTON, AUTHOR 3 B.ROST,G.T.MONTELIONE,L.TONG,J.F.HUNT,NORTHEAST STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (NESG) REVDAT 4 24-JAN-18 2Q0Z 1 AUTHOR JRNL REVDAT 3 18-OCT-17 2Q0Z 1 REMARK REVDAT 2 24-FEB-09 2Q0Z 1 VERSN REVDAT 1 05-JUN-07 2Q0Z 0 JRNL AUTH J.BENACH,H.NEELY,M.ABASHIDZE,W.C.EDSTROM,J.SEETHARAMAN, JRNL AUTH 2 L.ZHAO,Y.FANG,K.CUNNINGHAM,L.OWENS,L.-C.MA,R.XIAO,J.LIU, JRNL AUTH 3 M.C.BARAN,T.B.ACTON,B.ROST,G.T.MONTELIONE,L.TONG,J.F.HUNT JRNL TITL CRYSTAL STRUCTURE OF Q9P172/SEC63 FROM HOMO SAPIENS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.5 REMARK 3 NUMBER OF REFLECTIONS : 45263 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4440 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2309 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 265 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.43200 REMARK 3 B22 (A**2) : -0.43200 REMARK 3 B33 (A**2) : 0.86500 REMARK 3 B12 (A**2) : -0.96100 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.063 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.322 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.632 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 5.796 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 50.84 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PAR REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FRIEDEL PAIRS WERE USED FOR PHASING REMARK 4 REMARK 4 2Q0Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000043012. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58497 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.48500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS, RESOLVE 2.08, SNB REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M K/NA TARTRATE, 0.1M SODIUM REMARK 280 CITRATE PH 5.6, 1M AMMONIUM SULFATE, 0.5M IMIDAZOLE PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.70300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.40600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.40600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.70300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE X -9 REMARK 465 GLY X -8 REMARK 465 HIS X -7 REMARK 465 HIS X -6 REMARK 465 HIS X -5 REMARK 465 HIS X -4 REMARK 465 HIS X -3 REMARK 465 HIS X -2 REMARK 465 SER X -1 REMARK 465 HIS X 0 REMARK 465 MSE X 1 REMARK 465 ASP X 2 REMARK 465 VAL X 3 REMARK 465 ALA X 4 REMARK 465 PRO X 5 REMARK 465 LEU X 6 REMARK 465 ASN X 7 REMARK 465 LEU X 8 REMARK 465 GLY X 9 REMARK 465 MSE X 10 REMARK 465 ILE X 11 REMARK 465 ALA X 12 REMARK 465 ALA X 13 REMARK 465 TYR X 14 REMARK 465 TYR X 15 REMARK 465 TYR X 16 REMARK 465 ILE X 17 REMARK 465 ASN X 18 REMARK 465 TYR X 19 REMARK 465 THR X 20 REMARK 465 THR X 21 REMARK 465 ILE X 22 REMARK 465 GLU X 23 REMARK 465 LEU X 24 REMARK 465 PHE X 25 REMARK 465 SER X 26 REMARK 465 MSE X 27 REMARK 465 SER X 28 REMARK 465 LEU X 29 REMARK 465 ASN X 30 REMARK 465 ALA X 31 REMARK 465 LYS X 32 REMARK 465 GLU X 323 REMARK 465 THR X 324 REMARK 465 ASP X 325 REMARK 465 SER X 326 REMARK 465 ASP X 327 REMARK 465 SER X 328 REMARK 465 ASP X 329 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN X 73 OD1 ASN X 74 4556 1.43 REMARK 500 OE1 GLU X 254 O HOH X 3128 2665 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO X 75 C - N - CA ANGL. DEV. = -13.7 DEGREES REMARK 500 PRO X 75 N - CA - C ANGL. DEV. = 17.6 DEGREES REMARK 500 ARG X 166 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 GLU X 321 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 GLU X 321 CA - C - O ANGL. DEV. = -18.4 DEGREES REMARK 500 ALA X 322 CB - CA - C ANGL. DEV. = 9.4 DEGREES REMARK 500 ALA X 322 N - CA - CB ANGL. DEV. = 11.1 DEGREES REMARK 500 ALA X 322 CA - C - O ANGL. DEV. = -15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS X 56 19.33 82.88 REMARK 500 ASN X 73 -76.34 -77.76 REMARK 500 PRO X 75 107.10 -13.59 REMARK 500 PHE X 77 33.22 -67.28 REMARK 500 HIS X 158 -2.43 71.36 REMARK 500 ALA X 246 82.17 -152.21 REMARK 500 GLN X 278 -108.62 -97.32 REMARK 500 PRO X 290 -160.36 -74.42 REMARK 500 ALA X 305 -32.81 -139.19 REMARK 500 GLU X 321 -35.30 157.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU X 321 ALA X 322 -132.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN X 74 -18.74 REMARK 500 GLU X 321 -24.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HR1979 RELATED DB: TARGETDB DBREF 2Q0Z X 1 329 UNP Q9P172 Q9P172_HUMAN 1 329 SEQADV 2Q0Z MSE X -9 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z GLY X -8 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z HIS X -7 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z HIS X -6 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z HIS X -5 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z HIS X -4 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z HIS X -3 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z HIS X -2 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z SER X -1 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z HIS X 0 UNP Q9P172 CLONING ARTIFACT SEQADV 2Q0Z MSE X 1 UNP Q9P172 MET 1 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 10 UNP Q9P172 MET 10 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 27 UNP Q9P172 MET 27 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 95 UNP Q9P172 MET 95 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 136 UNP Q9P172 MET 136 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 141 UNP Q9P172 MET 141 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 146 UNP Q9P172 MET 146 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 179 UNP Q9P172 MET 179 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 181 UNP Q9P172 MET 181 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 302 UNP Q9P172 MET 302 MODIFIED RESIDUE SEQADV 2Q0Z MSE X 307 UNP Q9P172 MET 307 MODIFIED RESIDUE SEQRES 1 X 339 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ASP VAL SEQRES 2 X 339 ALA PRO LEU ASN LEU GLY MSE ILE ALA ALA TYR TYR TYR SEQRES 3 X 339 ILE ASN TYR THR THR ILE GLU LEU PHE SER MSE SER LEU SEQRES 4 X 339 ASN ALA LYS THR LYS VAL ARG GLY LEU ILE GLU ILE ILE SEQRES 5 X 339 SER ASN ALA ALA GLU TYR GLU ASN ILE PRO ILE ARG HIS SEQRES 6 X 339 HIS GLU ASP ASN LEU LEU ARG GLN LEU ALA GLN LYS VAL SEQRES 7 X 339 PRO HIS LYS LEU ASN ASN PRO LYS PHE ASN ASP PRO HIS SEQRES 8 X 339 VAL LYS THR ASN LEU LEU LEU GLN ALA HIS LEU SER ARG SEQRES 9 X 339 MSE GLN LEU SER ALA GLU LEU GLN SER ASP THR GLU GLU SEQRES 10 X 339 ILE LEU SER LYS ALA ILE ARG LEU ILE GLN ALA CYS VAL SEQRES 11 X 339 ASP VAL LEU SER SER ASN GLY TRP LEU SER PRO ALA LEU SEQRES 12 X 339 ALA ALA MSE GLU LEU ALA GLN MSE VAL THR GLN ALA MSE SEQRES 13 X 339 TRP SER LYS ASP SER TYR LEU LYS GLN LEU PRO HIS PHE SEQRES 14 X 339 THR SER GLU HIS ILE LYS ARG CYS THR ASP LYS GLY VAL SEQRES 15 X 339 GLU SER VAL PHE ASP ILE MSE GLU MSE GLU ASP GLU GLU SEQRES 16 X 339 ARG ASN ALA LEU LEU GLN LEU THR ASP SER GLN ILE ALA SEQRES 17 X 339 ASP VAL ALA ARG PHE CYS ASN ARG TYR PRO ASN ILE GLU SEQRES 18 X 339 LEU SER TYR GLU VAL VAL ASP LYS ASP SER ILE ARG SER SEQRES 19 X 339 GLY GLY PRO VAL VAL VAL LEU VAL GLN LEU GLU ARG GLU SEQRES 20 X 339 GLU GLU VAL THR GLY PRO VAL ILE ALA PRO LEU PHE PRO SEQRES 21 X 339 GLN LYS ARG GLU GLU GLY TRP TRP VAL VAL ILE GLY ASP SEQRES 22 X 339 ALA LYS SER ASN SER LEU ILE SER ILE LYS ARG LEU THR SEQRES 23 X 339 LEU GLN GLN LYS ALA LYS VAL LYS LEU ASP PHE VAL ALA SEQRES 24 X 339 PRO ALA THR GLY ALA HIS ASN TYR THR LEU TYR PHE MSE SEQRES 25 X 339 SER ASP ALA TYR MSE GLY CYS ASP GLN GLU TYR LYS PHE SEQRES 26 X 339 SER VAL ASP VAL LYS GLU ALA GLU THR ASP SER ASP SER SEQRES 27 X 339 ASP MODRES 2Q0Z MSE X 95 MET SELENOMETHIONINE MODRES 2Q0Z MSE X 136 MET SELENOMETHIONINE MODRES 2Q0Z MSE X 141 MET SELENOMETHIONINE MODRES 2Q0Z MSE X 146 MET SELENOMETHIONINE MODRES 2Q0Z MSE X 179 MET SELENOMETHIONINE MODRES 2Q0Z MSE X 181 MET SELENOMETHIONINE MODRES 2Q0Z MSE X 302 MET SELENOMETHIONINE MODRES 2Q0Z MSE X 307 MET SELENOMETHIONINE HET MSE X 95 8 HET MSE X 136 8 HET MSE X 141 8 HET MSE X 146 8 HET MSE X 179 8 HET MSE X 181 8 HET MSE X 302 8 HET MSE X 307 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 HOH *265(H2 O) HELIX 1 1 LYS X 34 ASN X 44 1 11 HELIX 2 2 ALA X 45 GLU X 49 5 5 HELIX 3 3 GLU X 57 VAL X 68 1 12 HELIX 4 4 ASP X 79 SER X 93 1 15 HELIX 5 5 SER X 98 ASN X 126 1 29 HELIX 6 6 TRP X 128 ALA X 145 1 18 HELIX 7 7 SER X 151 LEU X 156 5 6 HELIX 8 8 THR X 160 LYS X 170 1 11 HELIX 9 9 SER X 174 MSE X 181 1 8 HELIX 10 10 GLU X 182 GLN X 191 1 10 HELIX 11 11 THR X 193 ASN X 205 1 13 HELIX 12 12 ASP X 218 ILE X 222 5 5 SHEET 1 A 3 ILE X 210 VAL X 216 0 SHEET 2 A 3 PRO X 227 ARG X 236 -1 O GLN X 233 N SER X 213 SHEET 3 A 3 LYS X 280 VAL X 288 -1 O VAL X 283 N VAL X 232 SHEET 1 B 4 SER X 268 LEU X 275 0 SHEET 2 B 4 TRP X 257 ASP X 263 -1 N TRP X 257 O LEU X 275 SHEET 3 B 4 GLY X 293 SER X 303 -1 O TYR X 300 N VAL X 260 SHEET 4 B 4 GLN X 311 VAL X 319 -1 O TYR X 313 N LEU X 299 LINK C ARG X 94 N MSE X 95 1555 1555 1.33 LINK C MSE X 95 N GLN X 96 1555 1555 1.33 LINK C ALA X 135 N MSE X 136 1555 1555 1.33 LINK C MSE X 136 N GLU X 137 1555 1555 1.33 LINK C GLN X 140 N MSE X 141 1555 1555 1.33 LINK C MSE X 141 N VAL X 142 1555 1555 1.33 LINK C ALA X 145 N MSE X 146 1555 1555 1.33 LINK C MSE X 146 N TRP X 147 1555 1555 1.33 LINK C ILE X 178 N MSE X 179 1555 1555 1.33 LINK C MSE X 179 N GLU X 180 1555 1555 1.33 LINK C GLU X 180 N MSE X 181 1555 1555 1.33 LINK C MSE X 181 N GLU X 182 1555 1555 1.33 LINK C PHE X 301 N MSE X 302 1555 1555 1.33 LINK C MSE X 302 N SER X 303 1555 1555 1.33 LINK C TYR X 306 N MSE X 307 1555 1555 1.33 LINK C MSE X 307 N GLY X 308 1555 1555 1.33 CRYST1 94.550 94.550 74.109 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010576 0.006106 0.000000 0.00000 SCALE2 0.000000 0.012213 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013494 0.00000