PDB Short entry for 2QZ7 HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-AUG-07 2QZ7 TITLE THE CRYSTAL STRUCTURE OF A HOMOLOGUE OF TELLURIDE RESISTANCE PROTEIN TITLE 2 (TERD), SCO6318 FROM STREPTOMYCES COELICOLOR A3(2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN SCO6318; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR A3(2); SOURCE 3 ORGANISM_TAXID: 100226; SOURCE 4 STRAIN: A3(2), M145; SOURCE 5 ATCC: BAA-471; SOURCE 6 GENE: SCO6318, SCIF3.20C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: P15TV LIC KEYWDS APC7352, HOMOLOGUE OF TELLURIDE RESISTANCE PROTEIN (TERD), SCO6318, KEYWDS 2 STREPTOMYCES COELICOLOR A3(2), STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 4 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,X.XU,Z.ZHENG,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK,MIDWEST CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 2QZ7 1 VERSN REVDAT 2 24-FEB-09 2QZ7 1 VERSN REVDAT 1 28-AUG-07 2QZ7 0 JRNL AUTH K.TAN,X.XU,Z.ZHENG,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A HOMOLOGUE OF TELLURIDE RESISTANCE JRNL TITL 2 PROTEIN (TERD), SCO6318 FROM STREPTOMYCES COELICOLOR A3(2). JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 22786 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1225 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1654 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2648 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 117 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 41.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.200 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.169 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.122 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.760 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2742 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3730 ; 1.547 ; 1.931 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 345 ; 6.478 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;34.381 ;22.609 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 407 ;15.230 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;16.654 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 399 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2177 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1195 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1831 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 160 ; 0.128 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 22 ; 0.151 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 65 ; 0.178 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.110 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.044 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1702 ; 0.800 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2746 ; 1.425 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1076 ; 2.333 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 981 ; 3.675 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 191 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1440 26.8380 14.1320 REMARK 3 T TENSOR REMARK 3 T11: -0.2597 T22: -0.3056 REMARK 3 T33: -0.1075 T12: -0.0201 REMARK 3 T13: 0.0401 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 2.2584 L22: 4.1800 REMARK 3 L33: 6.0602 L12: -0.0050 REMARK 3 L13: -0.5306 L23: 1.7544 REMARK 3 S TENSOR REMARK 3 S11: 0.1179 S12: -0.1343 S13: -0.0773 REMARK 3 S21: 0.3710 S22: -0.0090 S23: 0.0533 REMARK 3 S31: 0.1903 S32: 0.2793 S33: -0.1089 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 20 B 188 REMARK 3 ORIGIN FOR THE GROUP (A): -11.0360 33.6220 33.9540 REMARK 3 T TENSOR REMARK 3 T11: -0.2694 T22: -0.1984 REMARK 3 T33: -0.1405 T12: -0.0429 REMARK 3 T13: -0.0259 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 3.1859 L22: 3.1230 REMARK 3 L33: 2.1696 L12: 1.3346 REMARK 3 L13: -0.2687 L23: 0.2131 REMARK 3 S TENSOR REMARK 3 S11: -0.2458 S12: 0.2631 S13: 0.2338 REMARK 3 S21: -0.5009 S22: 0.1311 S23: 0.1736 REMARK 3 S31: 0.0406 S32: -0.0742 S33: 0.1147 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2QZ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-07. REMARK 100 THE RCSB ID CODE IS RCSB044229. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24107 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 46.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 45.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.50 REMARK 200 R MERGE FOR SHELL (I) : 0.59100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 3.4M NA FORMATE, 40% REMARK 280 JEFFAMINE M-600, PH 6.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.43300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 33.91050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.91050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.71650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.91050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 33.91050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 128.14950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.91050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.91050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.71650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 33.91050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.91050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 128.14950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 85.43300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. AUTHORS STATE THAT THE BIOLOGICAL UNIT REMARK 300 OF THIS PROTEIN IS EXPERIMENTALLY UNKNOWN, HOWEVER, REMARK 300 FROM PACKING IT IS LIKELY A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 GLY A 5 REMARK 465 LEU A 6 REMARK 465 GLU A 7 REMARK 465 ARG A 8 REMARK 465 GLU A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 LYS A 12 REMARK 465 PRO A 13 REMARK 465 VAL A 14 REMARK 465 SER A 15 REMARK 465 SER A 16 REMARK 465 ASP A 17 REMARK 465 ALA A 18 REMARK 465 LYS A 19 REMARK 465 SER A 192 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 4 REMARK 465 GLY B 5 REMARK 465 LEU B 6 REMARK 465 GLU B 7 REMARK 465 ARG B 8 REMARK 465 GLU B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 465 LYS B 12 REMARK 465 PRO B 13 REMARK 465 VAL B 14 REMARK 465 SER B 15 REMARK 465 SER B 16 REMARK 465 ASP B 17 REMARK 465 ALA B 18 REMARK 465 LYS B 19 REMARK 465 ARG B 189 REMARK 465 PRO B 190 REMARK 465 GLY B 191 REMARK 465 SER B 192 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 67 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 38 151.67 -47.44 REMARK 500 ALA A 53 77.38 -151.64 REMARK 500 THR A 81 -25.57 -140.16 REMARK 500 GLU A 94 78.38 -101.94 REMARK 500 LYS B 22 -63.97 -109.42 REMARK 500 ALA B 169 42.15 -142.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 193 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 30 O REMARK 620 2 GLY A 82 O 84.1 REMARK 620 3 GLY A 84 O 171.4 89.1 REMARK 620 4 HOH A 207 O 82.3 156.2 102.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 194 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 42 O REMARK 620 2 ASP A 43 OD1 81.3 REMARK 620 3 SER A 79 O 91.8 140.5 REMARK 620 4 GLU A 89 OE1 98.7 127.1 92.4 REMARK 620 5 HOH A 250 O 150.5 83.9 83.5 110.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 195 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 120 O REMARK 620 2 VAL A 123 O 85.0 REMARK 620 3 THR A 126 OG1 115.7 104.3 REMARK 620 4 HOH A 253 O 90.7 173.5 81.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 193 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP B 30 O REMARK 620 2 GLY B 82 O 78.6 REMARK 620 3 GLY B 84 O 165.0 101.0 REMARK 620 4 HOH B 246 O 99.9 104.5 94.7 REMARK 620 5 HOH B 243 O 83.2 149.9 90.5 102.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 196 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 33 OG REMARK 620 2 PRO B 34 O 91.9 REMARK 620 3 ARG B 37 O 95.5 87.5 REMARK 620 4 HOH B 201 O 92.7 92.5 171.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 194 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 42 O REMARK 620 2 ASP B 43 OD1 82.6 REMARK 620 3 SER B 79 O 89.6 131.9 REMARK 620 4 GLU B 89 OE2 102.1 134.3 93.8 REMARK 620 5 HOH B 239 O 149.5 84.9 78.3 106.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 195 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 120 O REMARK 620 2 VAL B 123 O 88.5 REMARK 620 3 THR B 126 OG1 96.8 103.7 REMARK 620 4 HOH B 244 O 174.0 90.4 77.7 REMARK 620 5 HOH B 238 O 90.3 177.9 74.7 90.6 REMARK 620 6 ASP B 121 O 94.6 85.2 165.7 91.1 96.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 197 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC7352 RELATED DB: TARGETDB DBREF 2QZ7 A 1 190 UNP Q93RS6 Q93RS6_STRCO 1 190 DBREF 2QZ7 B 1 190 UNP Q93RS6 Q93RS6_STRCO 1 190 SEQADV 2QZ7 GLY A -1 UNP Q93RS6 EXPRESSION TAG SEQADV 2QZ7 HIS A 0 UNP Q93RS6 EXPRESSION TAG SEQADV 2QZ7 GLY A 191 UNP Q93RS6 EXPRESSION TAG SEQADV 2QZ7 SER A 192 UNP Q93RS6 EXPRESSION TAG SEQADV 2QZ7 GLY B -1 UNP Q93RS6 EXPRESSION TAG SEQADV 2QZ7 HIS B 0 UNP Q93RS6 EXPRESSION TAG SEQADV 2QZ7 GLY B 191 UNP Q93RS6 EXPRESSION TAG SEQADV 2QZ7 SER B 192 UNP Q93RS6 EXPRESSION TAG SEQRES 1 A 194 GLY HIS MSE SER ARG ARG GLY LEU GLU ARG GLU GLY GLY SEQRES 2 A 194 LYS PRO VAL SER SER ASP ALA LYS GLY LEU LYS ARG VAL SEQRES 3 A 194 ASP VAL ARG LEU LYS TRP ASP PRO SER PRO TRP ASP ARG SEQRES 4 A 194 PRO PRO HIS HIS LEU ASP ILE ILE ALA THR THR TYR ALA SEQRES 5 A 194 ALA ASP ALA PRO HIS GLY ARG PRO VAL TYR VAL VAL GLN SEQRES 6 A 194 PHE ASP LYS ARG SER PRO ASP GLY THR ILE ASN MSE SER SEQRES 7 A 194 ARG HIS SER ARG THR GLY GLN GLY PHE GLY PHE VAL GLU SEQRES 8 A 194 GLU MSE THR PHE GLU LEU ASP ARG LEU SER PRO SER ILE SEQRES 9 A 194 ALA ARG VAL ILE VAL GLY VAL ALA ILE HIS GLN ASP ASN SEQRES 10 A 194 GLY HIS LYS THR PHE ASP ASP VAL SER ASN THR GLY VAL SEQRES 11 A 194 VAL VAL ALA GLU GLY TYR ARG GLU LEU LEU THR ASP GLY SEQRES 12 A 194 PHE GLU ARG VAL ALA GLY ALA THR ALA ALA THR VAL ALA SEQRES 13 A 194 GLU PHE THR ARG ASN ALA SER GLY ALA TRP GLU PHE ARG SEQRES 14 A 194 GLU ALA VAL ARG GLY PHE ASP SER ASP PRO VAL LEU PHE SEQRES 15 A 194 ALA THR GLU MSE GLY SER ALA PRO ARG PRO GLY SER SEQRES 1 B 194 GLY HIS MSE SER ARG ARG GLY LEU GLU ARG GLU GLY GLY SEQRES 2 B 194 LYS PRO VAL SER SER ASP ALA LYS GLY LEU LYS ARG VAL SEQRES 3 B 194 ASP VAL ARG LEU LYS TRP ASP PRO SER PRO TRP ASP ARG SEQRES 4 B 194 PRO PRO HIS HIS LEU ASP ILE ILE ALA THR THR TYR ALA SEQRES 5 B 194 ALA ASP ALA PRO HIS GLY ARG PRO VAL TYR VAL VAL GLN SEQRES 6 B 194 PHE ASP LYS ARG SER PRO ASP GLY THR ILE ASN MSE SER SEQRES 7 B 194 ARG HIS SER ARG THR GLY GLN GLY PHE GLY PHE VAL GLU SEQRES 8 B 194 GLU MSE THR PHE GLU LEU ASP ARG LEU SER PRO SER ILE SEQRES 9 B 194 ALA ARG VAL ILE VAL GLY VAL ALA ILE HIS GLN ASP ASN SEQRES 10 B 194 GLY HIS LYS THR PHE ASP ASP VAL SER ASN THR GLY VAL SEQRES 11 B 194 VAL VAL ALA GLU GLY TYR ARG GLU LEU LEU THR ASP GLY SEQRES 12 B 194 PHE GLU ARG VAL ALA GLY ALA THR ALA ALA THR VAL ALA SEQRES 13 B 194 GLU PHE THR ARG ASN ALA SER GLY ALA TRP GLU PHE ARG SEQRES 14 B 194 GLU ALA VAL ARG GLY PHE ASP SER ASP PRO VAL LEU PHE SEQRES 15 B 194 ALA THR GLU MSE GLY SER ALA PRO ARG PRO GLY SER MODRES 2QZ7 MSE A 75 MET SELENOMETHIONINE MODRES 2QZ7 MSE A 91 MET SELENOMETHIONINE MODRES 2QZ7 MSE A 184 MET SELENOMETHIONINE MODRES 2QZ7 MSE B 75 MET SELENOMETHIONINE MODRES 2QZ7 MSE B 91 MET SELENOMETHIONINE MODRES 2QZ7 MSE B 184 MET SELENOMETHIONINE HET MSE A 75 8 HET MSE A 91 8 HET MSE A 184 8 HET MSE B 75 8 HET MSE B 91 8 HET MSE B 184 8 HET NA A 193 1 HET NA B 193 1 HET NA A 194 1 HET NA B 194 1 HET NA A 195 1 HET NA B 195 1 HET NA B 196 1 HET EDO A 196 4 HET EDO A 197 4 HETNAM MSE SELENOMETHIONINE HETNAM NA SODIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 NA 7(NA 1+) FORMUL 10 EDO 2(C2 H6 O2) FORMUL 12 HOH *117(H2 O) HELIX 1 1 LEU A 95 LEU A 98 5 4 HELIX 2 2 THR A 119 VAL A 123 5 5 HELIX 3 3 PHE A 142 ALA A 146 5 5 HELIX 4 4 ASP A 176 MSE A 184 1 9 HELIX 5 5 ASP B 96 LEU B 98 5 3 HELIX 6 6 THR B 119 VAL B 123 5 5 HELIX 7 7 PHE B 142 ALA B 146 5 5 HELIX 8 8 ASP B 176 MSE B 184 1 9 SHEET 1 A 5 ILE A 73 ARG A 77 0 SHEET 2 A 5 GLU A 89 PHE A 93 -1 O THR A 92 N ASN A 74 SHEET 3 A 5 VAL A 24 LYS A 29 -1 N VAL A 24 O PHE A 93 SHEET 4 A 5 GLY A 127 GLU A 132 -1 O GLY A 127 N LYS A 29 SHEET 5 A 5 ARG A 135 ASP A 140 -1 O LEU A 137 N VAL A 130 SHEET 1 B 5 TYR A 60 VAL A 62 0 SHEET 2 B 5 LEU A 42 ALA A 50 -1 N ALA A 46 O VAL A 62 SHEET 3 B 5 ILE A 102 ILE A 111 -1 O ALA A 110 N ASP A 43 SHEET 4 B 5 ALA A 150 ARG A 158 -1 O PHE A 156 N VAL A 105 SHEET 5 B 5 TRP A 164 PHE A 173 -1 O GLU A 165 N THR A 157 SHEET 1 C 5 ILE B 73 ARG B 77 0 SHEET 2 C 5 GLU B 89 GLU B 94 -1 O THR B 92 N ASN B 74 SHEET 3 C 5 ARG B 23 LYS B 29 -1 N VAL B 24 O PHE B 93 SHEET 4 C 5 GLY B 127 GLU B 132 -1 O GLY B 127 N LYS B 29 SHEET 5 C 5 ARG B 135 ASP B 140 -1 O LEU B 137 N VAL B 130 SHEET 1 D 5 TYR B 60 VAL B 62 0 SHEET 2 D 5 LEU B 42 ALA B 50 -1 N ALA B 46 O VAL B 62 SHEET 3 D 5 ILE B 102 ILE B 111 -1 O GLY B 108 N ILE B 45 SHEET 4 D 5 ALA B 150 ARG B 158 -1 O PHE B 156 N VAL B 105 SHEET 5 D 5 TRP B 164 PHE B 173 -1 O PHE B 173 N ALA B 150 LINK O TRP A 30 NA NA A 193 1555 1555 2.29 LINK O LEU A 42 NA NA A 194 1555 1555 2.37 LINK OD1 ASP A 43 NA NA A 194 1555 1555 2.42 LINK O SER A 79 NA NA A 194 1555 1555 2.37 LINK O GLY A 82 NA NA A 193 1555 1555 2.49 LINK O GLY A 84 NA NA A 193 1555 1555 2.24 LINK OE1 GLU A 89 NA NA A 194 1555 1555 2.35 LINK O PHE A 120 NA NA A 195 1555 1555 2.14 LINK O VAL A 123 NA NA A 195 1555 1555 2.38 LINK OG1 THR A 126 NA NA A 195 1555 1555 2.68 LINK O TRP B 30 NA NA B 193 1555 1555 2.43 LINK OG SER B 33 NA NA B 196 1555 1555 2.37 LINK O PRO B 34 NA NA B 196 1555 1555 2.70 LINK O ARG B 37 NA NA B 196 1555 1555 2.51 LINK O LEU B 42 NA NA B 194 1555 1555 2.35 LINK OD1 ASP B 43 NA NA B 194 1555 1555 2.26 LINK O SER B 79 NA NA B 194 1555 1555 2.48 LINK O GLY B 82 NA NA B 193 1555 1555 2.20 LINK O GLY B 84 NA NA B 193 1555 1555 2.26 LINK OE2 GLU B 89 NA NA B 194 1555 1555 2.25 LINK O PHE B 120 NA NA B 195 1555 1555 2.35 LINK O VAL B 123 NA NA B 195 1555 1555 2.32 LINK OG1 THR B 126 NA NA B 195 1555 1555 2.76 LINK NA NA A 193 O HOH A 207 1555 1555 2.28 LINK NA NA B 193 O HOH B 246 1555 1555 2.15 LINK NA NA B 193 O HOH B 243 1555 1555 2.25 LINK NA NA A 194 O HOH A 250 1555 1555 2.19 LINK NA NA B 194 O HOH B 239 1555 1555 2.36 LINK NA NA A 195 O HOH A 253 1555 1555 2.19 LINK NA NA B 195 O HOH B 244 1555 1555 2.22 LINK NA NA B 195 O HOH B 238 1555 1555 2.44 LINK NA NA B 196 O HOH B 201 1555 1555 2.46 LINK C ASN A 74 N MSE A 75 1555 1555 1.33 LINK C MSE A 75 N SER A 76 1555 1555 1.33 LINK C GLU A 90 N MSE A 91 1555 1555 1.33 LINK C MSE A 91 N THR A 92 1555 1555 1.33 LINK C GLU A 183 N MSE A 184 1555 1555 1.35 LINK C MSE A 184 N GLY A 185 1555 1555 1.34 LINK C ASN B 74 N MSE B 75 1555 1555 1.32 LINK C MSE B 75 N SER B 76 1555 1555 1.33 LINK C GLU B 90 N MSE B 91 1555 1555 1.32 LINK C MSE B 91 N THR B 92 1555 1555 1.32 LINK C GLU B 183 N MSE B 184 1555 1555 1.33 LINK C MSE B 184 N GLY B 185 1555 1555 1.33 LINK NA NA B 195 O ASP B 121 1555 8555 2.37 CISPEP 1 ALA B 187 PRO B 188 0 5.27 SITE 1 AC1 6 TRP A 30 GLY A 82 GLY A 84 ARG A 167 SITE 2 AC1 6 HOH A 207 HOH A 217 SITE 1 AC2 5 TRP B 30 GLY B 82 GLY B 84 HOH B 243 SITE 2 AC2 5 HOH B 246 SITE 1 AC3 6 HIS A 41 LEU A 42 ASP A 43 SER A 79 SITE 2 AC3 6 GLU A 89 HOH A 250 SITE 1 AC4 5 LEU B 42 ASP B 43 SER B 79 GLU B 89 SITE 2 AC4 5 HOH B 239 SITE 1 AC5 4 PHE A 120 VAL A 123 THR A 126 HOH A 253 SITE 1 AC6 6 PHE B 120 ASP B 121 VAL B 123 THR B 126 SITE 2 AC6 6 HOH B 238 HOH B 244 SITE 1 AC7 4 SER B 33 PRO B 34 ARG B 37 HOH B 201 SITE 1 AC8 5 HIS A 112 GLN A 113 ASP A 114 ASP A 176 SITE 2 AC8 5 PRO A 177 SITE 1 AC9 5 HIS A 78 SER A 79 GLN A 83 GLY A 84 SITE 2 AC9 5 HOH A 204 CRYST1 67.821 67.821 170.866 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014745 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014745 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005853 0.00000